NO12G01680, NO12G01680 (gene) Nannochloropsis oceanica

Overview
NameNO12G01680
Unique NameNO12G01680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1656
Alignment locationchr12:502593..504248 -

Link to JBrowse

Properties
Property NameValue
DescriptionCyclin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:502593..504248 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR006671Cyclin_N
IPR004367Cyclin_C-dom
IPR013763Cyclin-like
Homology
BLAST of NO12G01680 vs. NCBI_GenBank
Match: EJK44581.1 (hypothetical protein THAOC_36869, partial [Thalassiosira oceanica])

HSP 1 Score: 251.1 bits (640), Expect = 6.600e-63
Identity = 128/262 (48.85%), Postives = 172/262 (65.65%), Query Frame = 0
Query:  206 DDIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCGLRPWSPTLTHYTKYTEEALLPCLRVLSPWLNSRSQSLQAIRKKYGASKFMMVSGMDL 468
            DDID  D D+P+    Y  + Y  +  +E      P YM  QP++N RMRAILVDWLVEVH KFK  PETL+LTVNIIDR+L+  +V RP+LQLVGVTA  IA K+EEI+PPE+++LVY+ D AYTR+QI++ME  ML  L +++ V T   F+VRFLKA HAD KI  L+  + + TL    +L +LPS +AAA+V +AR+ CG   WSPTL H     +E ++P    +       S SL+A+ KKY  S++  V  ++L
Sbjct:  139 DDIDEKDKDDPVCASAYVASHYAAFSAREAAMSTRPGYMDDQPFVNERMRAILVDWLVEVHLKFKLVPETLHLTVNIIDRYLNICEVTRPRLQLVGVTALSIASKFEEIFPPELRDLVYICDNAYTREQILEMETKMLRKLDYRINVPTAQAFLVRFLKAAHADKKIVQLSCCVLDSTLLSYPLLRYLPSQLAAASVLIARRTCGRNSWSPTLLHIAGRKQEEVVPVALAVLKAKGEMSASLKALGKKYCHSRYGNVGDLEL 400          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_023904406.1 (G2/mitotic-specific cyclin-2-like [Quercus suber] >POE45399.1 g2/mitotic-specific cyclin-1 [Quercus suber])

HSP 1 Score: 242.3 bits (617), Expect = 3.100e-60
Identity = 133/305 (43.61%), Postives = 198/305 (64.92%), Query Frame = 0
Query:  161 IEEDNEMPREGEG----SEPLEALGAITQDLQGMTLKYSAVRPALGPDVDDIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLAR-KNCGLRPWSPTLTHYTKYTEEALLPCLRVLSPW-LNSRSQSLQAIRKKYGASKF 460
            I+E+++ P+E        E  EA+ + T +++ + ++     P +     DID+ DA NPLA V+Y E+ Y +YR+ EC     P YMA+Q  IN RMRAIL+DWL+EVH KF+   ETL+LTVN+IDRFL ++ V R KLQLVG+ A L+ACKYEE+  P V +L+ ++D AYTRK++++ME+ ML TL+F ++V T + FM RF KA  +D KI  L+ ++ E +L E ++L F PS++AAAAVY A+    G + W+ T   +T Y+E+ LL C R++  +   + +  L  + +KY  SKF
Sbjct:  120 IDEEHKAPKEDHPVPMFLEQPEAMPSETDEMEEVEMEDIVEEPVM-----DIDSCDAKNPLAVVDYIEDLYAYYRKMECFSCVSPDYMAQQFDINERMRAILIDWLIEVHDKFELMKETLFLTVNLIDRFLSKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMESLMLNTLQFNMSVPTPYVFMQRFFKAAQSDKKIEQLSFFLIELSLVEYEMLKFQPSVLAAAAVYTAQCALYGFKQWNKTCEWHTSYSEDQLLECSRLMVAFHQRAATGKLTGVHRKYCTSKF 419          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: BAE53369.1 (cyclin B2 [Allium cepa])

HSP 1 Score: 241.5 bits (615), Expect = 5.300e-60
Identity = 138/301 (45.85%), Postives = 186/301 (61.79%), Query Frame = 0
Query:  161 IEEDNEMPREGEGSEPLEALGAITQDLQGMTLKYSAVRPALGPDVDDIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNC-GLRPWSPTLTHYTKYTEEALLPCLRVLSPW-LNSRSQSLQAIRKKYGASKF 460
            I+ED  M  E E  E  E +  IT +              +     DID  D  NPLA V+Y ++ Y +YR  E      P YM+ Q  IN +MRAIL+DWLVEVHYKF+   ETLYLTVNIIDRFL R+ V R KLQLVGVTA L+ACKYEE+  P V +LV ++D AYTRK+++DME  ++ TL+F  +V T   F+ RFLKA  ++ K+  L+S+I E +L E  +L F PS++AAAA+Y A+ +  G + W+ T   YT YTE+ LL C +++  +  N+ S  L  + +KY  SKF
Sbjct:  100 IDEDVPMVEESEEMEECELVEEITME------------DIVIDSAQDIDIGDVGNPLAVVDYVDDIYNYYRRVEASSCVHPDYMSNQFDINDKMRAILIDWLVEVHYKFELMEETLYLTVNIIDRFLSRQAVVRKKLQLVGVTAMLLACKYEEVSVPVVDDLVTISDRAYTRKEVLDMEKSIVKTLQFNTSVPTPFVFLRRFLKAAGSEKKLELLSSFIIELSLVEYQMLKFQPSLLAAAAIYTAQCSLKGFKFWTRTCEQYTMYTEDQLLECSKMMVGFHRNAGSGKLTGVHRKYSTSKF 388          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_018462510.1 (PREDICTED: cyclin-B2-4-like isoform X2 [Raphanus sativus])

HSP 1 Score: 241.1 bits (614), Expect = 6.900e-60
Identity = 137/310 (44.19%), Postives = 189/310 (60.97%), Query Frame = 0
Query:  159 MHIEEDNEMPREGEGSEPL-----EALGAITQDLQGMTLKYSAVRPALGPDVDDIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLD--RKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNC-GLRPWSPTLTHYTKYTEEALLPCLR-VLSPWLNSRSQSLQAIRKKYGASKF 460
            +H +E  +   +G+  EP+     E++      ++G+ ++ SA        V DID+ D +N LA VEY  + Y  Y+  ECR    P YM  QP IN RMRAILVDWL+EVHYKF+   ETLYLT+N+IDRFL      VPR KLQLVGVTA L+ACKYEE+  P V +L+ ++D AYTR++++DME  M  TL+F   + T + FM RFLKA  +D K+  L+ +I E  L E ++L ++PS +AA+A+Y A+    G   WS T   YT YTEE LL C R ++     + +  L  + +KY  SKF
Sbjct:   84 IHKQETKKSDEDGDFHEPMFVQHTESMLDEIDRMEGIEMEDSAEEET----VMDIDSSDKNNSLAVVEYINDLYDFYKNNECRSCVPPNYMEIQPDINERMRAILVDWLIEVHYKFELMEETLYLTINLIDRFLAVVTHHVPRKKLQLVGVTALLLACKYEEVSVPVVDDLIVISDKAYTRREVLDMEKLMANTLQFNFCLPTPYVFMRRFLKAAQSDKKVELLSFFIIELCLVEYEMLQYVPSQLAASAIYTAQSTLKGFEEWSKTCEFYTGYTEEKLLDCSRKMVGLHHKAGTGKLTGVYRKYNTSKF 389          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_009786249.1 (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-60
Identity = 125/259 (48.26%), Postives = 176/259 (67.95%), Query Frame = 0
Query:  207 DIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCG-LRPWSPTLTHYTKYTEEALLPCLRVL-SPWLNSRSQSLQAIRKKYGASKFMMVS 464
            DID+ D  NPLA  EY ++ + +Y++ E      P YM +Q  IN RMRAIL+DWL+EVHYKF    ETLYLTVN+IDRFL  +QV R KLQLVGVTA L+ACKYEE+  P V++L+ ++D AYTRK++++ME  M+ TL+F ++V T + FM+RFLKA  +D K+  L+ +++E  L E ++L F PSM+AAAA++ A+   G L  WS T   Y+ YT + LL C R++ S   N+ +  L  + +KY  SK+  V+
Sbjct:  173 DIDSADKKNPLAVAEYIDDMHAYYKKTESSSCAPPNYMEQQFDINERMRAILIDWLIEVHYKFDLMEETLYLTVNLIDRFLAVQQVIRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMINTLQFNLSVPTAYVFMMRFLKAAQSDKKVELLSFFMTELCLVEYEMLRFPPSMLAAAAIFTAQCTLGVLNEWSKTCEKYSHYTRDQLLECSRLMVSFHQNAATGKLAGVHRKYSISKYGFVA 431          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_009786250.1 (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-60
Identity = 125/259 (48.26%), Postives = 176/259 (67.95%), Query Frame = 0
Query:  207 DIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCG-LRPWSPTLTHYTKYTEEALLPCLRVL-SPWLNSRSQSLQAIRKKYGASKFMMVS 464
            DID+ D  NPLA  EY ++ + +Y++ E      P YM +Q  IN RMRAIL+DWL+EVHYKF    ETLYLTVN+IDRFL  +QV R KLQLVGVTA L+ACKYEE+  P V++L+ ++D AYTRK++++ME  M+ TL+F ++V T + FM+RFLKA  +D K+  L+ +++E  L E ++L F PSM+AAAA++ A+   G L  WS T   Y+ YT + LL C R++ S   N+ +  L  + +KY  SK+  V+
Sbjct:  171 DIDSADKKNPLAVAEYIDDMHAYYKKTESSSCAPPNYMEQQFDINERMRAILIDWLIEVHYKFDLMEETLYLTVNLIDRFLAVQQVIRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMINTLQFNLSVPTAYVFMMRFLKAAQSDKKVELLSFFMTELCLVEYEMLRFPPSMLAAAAIFTAQCTLGVLNEWSKTCEKYSHYTRDQLLECSRLMVSFHQNAATGKLAGVHRKYSISKYGFVA 429          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_009786251.1 (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X3 [Nicotiana sylvestris])

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-60
Identity = 125/259 (48.26%), Postives = 176/259 (67.95%), Query Frame = 0
Query:  207 DIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCG-LRPWSPTLTHYTKYTEEALLPCLRVL-SPWLNSRSQSLQAIRKKYGASKFMMVS 464
            DID+ D  NPLA  EY ++ + +Y++ E      P YM +Q  IN RMRAIL+DWL+EVHYKF    ETLYLTVN+IDRFL  +QV R KLQLVGVTA L+ACKYEE+  P V++L+ ++D AYTRK++++ME  M+ TL+F ++V T + FM+RFLKA  +D K+  L+ +++E  L E ++L F PSM+AAAA++ A+   G L  WS T   Y+ YT + LL C R++ S   N+ +  L  + +KY  SK+  V+
Sbjct:  170 DIDSADKKNPLAVAEYIDDMHAYYKKTESSSCAPPNYMEQQFDINERMRAILIDWLIEVHYKFDLMEETLYLTVNLIDRFLAVQQVIRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMINTLQFNLSVPTAYVFMMRFLKAAQSDKKVELLSFFMTELCLVEYEMLRFPPSMLAAAAIFTAQCTLGVLNEWSKTCEKYSHYTRDQLLECSRLMVSFHQNAATGKLAGVHRKYSISKYGFVA 428          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_009786252.1 (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X4 [Nicotiana sylvestris])

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-60
Identity = 125/259 (48.26%), Postives = 176/259 (67.95%), Query Frame = 0
Query:  207 DIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCG-LRPWSPTLTHYTKYTEEALLPCLRVL-SPWLNSRSQSLQAIRKKYGASKFMMVS 464
            DID+ D  NPLA  EY ++ + +Y++ E      P YM +Q  IN RMRAIL+DWL+EVHYKF    ETLYLTVN+IDRFL  +QV R KLQLVGVTA L+ACKYEE+  P V++L+ ++D AYTRK++++ME  M+ TL+F ++V T + FM+RFLKA  +D K+  L+ +++E  L E ++L F PSM+AAAA++ A+   G L  WS T   Y+ YT + LL C R++ S   N+ +  L  + +KY  SK+  V+
Sbjct:  165 DIDSADKKNPLAVAEYIDDMHAYYKKTESSSCAPPNYMEQQFDINERMRAILIDWLIEVHYKFDLMEETLYLTVNLIDRFLAVQQVIRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMINTLQFNLSVPTAYVFMMRFLKAAQSDKKVELLSFFMTELCLVEYEMLRFPPSMLAAAAIFTAQCTLGVLNEWSKTCEKYSHYTRDQLLECSRLMVSFHQNAATGKLAGVHRKYSISKYGFVA 423          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: XP_009786253.1 (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X5 [Nicotiana sylvestris])

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-60
Identity = 125/259 (48.26%), Postives = 176/259 (67.95%), Query Frame = 0
Query:  207 DIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCG-LRPWSPTLTHYTKYTEEALLPCLRVL-SPWLNSRSQSLQAIRKKYGASKFMMVS 464
            DID+ D  NPLA  EY ++ + +Y++ E      P YM +Q  IN RMRAIL+DWL+EVHYKF    ETLYLTVN+IDRFL  +QV R KLQLVGVTA L+ACKYEE+  P V++L+ ++D AYTRK++++ME  M+ TL+F ++V T + FM+RFLKA  +D K+  L+ +++E  L E ++L F PSM+AAAA++ A+   G L  WS T   Y+ YT + LL C R++ S   N+ +  L  + +KY  SK+  V+
Sbjct:  163 DIDSADKKNPLAVAEYIDDMHAYYKKTESSSCAPPNYMEQQFDINERMRAILIDWLIEVHYKFDLMEETLYLTVNLIDRFLAVQQVIRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMINTLQFNLSVPTAYVFMMRFLKAAQSDKKVELLSFFMTELCLVEYEMLRFPPSMLAAAAIFTAQCTLGVLNEWSKTCEKYSHYTRDQLLECSRLMVSFHQNAATGKLAGVHRKYSISKYGFVA 421          
BLAST of NO12G01680 vs. NCBI_GenBank
Match: KOO29302.1 (hypothetical protein Ctob_005047 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-60
Identity = 138/315 (43.81%), Postives = 193/315 (61.27%), Query Frame = 0
Query:  156 EIDMHIEEDNEMPREGEGSEPLEALGAITQDLQGMTLKYSAVRPALGPDVDDIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQVTVCTTHCFMVRFLKAG--HAD--NKIYFLASYISERTLQEVDILCFLPSMVAAAAVYLARKNCGLRPWSPTLTHYTKYTEEALLPCLRVLSP-WLNSRSQSLQAIRKKYGASKFMMVSGM 466
            +I    E +  + + G+  EP +   A  +D      +  AV      +VD +D  D  +  + V Y +  + HYR+ E        Y+ KQ  IN +MRAIL+DWLVEVH KFK  PETLYLTVN+IDR+L+++++ R  LQLVGVTA  I+ KYEEIY PE ++ VY++D AYTR+QI+ ME  ML+ L FQ+T   +  F+ RF+K    HA+   K   LA+Y+ E TLQ+  +L +LPS +AAAA YL+ K  G  PWS  L  +T YTE A+LPC+R ++    N+ + +LQA+RKKY   K   VSG+
Sbjct:   19 DISKRPEHNKAIGQLGKPLEPAKKALAKPRDNLANAFETLAVP---SKEVDKVDIPDVQDAQSVVPYLQEIHDHYRKSEAIHLAASTYITKQEDINEKMRAILIDWLVEVHLKFKLMPETLYLTVNLIDRYLEKEKIKRSHLQLVGVTAMFISSKYEEIYAPECRDFVYISDKAYTREQILKMEGDMLSKLNFQLTTPNSLLFLKRFVKVAGVHANPRTKTDLLANYLVELTLQDYKMLKYLPSQIAAAATYLSLKTMGANPWSSELQQHTCYTEAAILPCVRDMNQLHKNAAANNLQAVRKKYAQEKHGSVSGI 330          
The following BLAST results are available for this feature:
BLAST of NO12G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EJK44581.16.600e-6348.85hypothetical protein THAOC_36869, partial [Thalass... [more]
XP_023904406.13.100e-6043.61G2/mitotic-specific cyclin-2-like [Quercus suber] ... [more]
BAE53369.15.300e-6045.85cyclin B2 [Allium cepa][more]
XP_018462510.16.900e-6044.19PREDICTED: cyclin-B2-4-like isoform X2 [Raphanus s... [more]
XP_009786249.19.000e-6048.26PREDICTED: G2/mitotic-specific cyclin-2-like isofo... [more]
XP_009786250.19.000e-6048.26PREDICTED: G2/mitotic-specific cyclin-2-like isofo... [more]
XP_009786251.19.000e-6048.26PREDICTED: G2/mitotic-specific cyclin-2-like isofo... [more]
XP_009786252.19.000e-6048.26PREDICTED: G2/mitotic-specific cyclin-2-like isofo... [more]
XP_009786253.19.000e-6048.26PREDICTED: G2/mitotic-specific cyclin-2-like isofo... [more]
KOO29302.19.000e-6043.81hypothetical protein Ctob_005047 [Chrysochromulina... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010088NSK010088Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01680.1NO12G01680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592149gene_5325Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100054g27gene4652Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01680.1NO12G01680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01680 ID=NO12G01680|Name=NO12G01680|organism=Nannochloropsis oceanica|type=gene|length=1656bp
ATGTACGCGGCACGCAGCGACTCCGCCACATTTGGTGGTAAGCACGTGTC
GGCACAGCAGCAGGAGGTACCGTCCATGGGAGACGGGCCTCAACAACCAG
AAGGCGCTGATCCGGTCCAAAAGCCTGGAGTTTCTACCCGCAGCGGCCTG
GCCTCCGGGGCTTCCCGCCGTGCTCTGGGAGACATTACCAACAACAGGAG
CGCAAATACCGGAGCAGGGGGTAAGCAAGGGCAGCAACAGCAGAATGTGT
CCAAGCCCACCACACGGGCCGCTTTGGCCGCTGCCGTCGCGGCTGGCTCG
AGCTCCATCACCGGCAGCAGCAGCTCCAGTCTGGGTGGCTTGGCTTCGGC
GGCACCGGTGCCCGTCTTGCACCAGCAATCCGCCGCGGCGTTGCCACACT
TGGAGGAGGAGAGCAGGCGGCGACAGCAGGAGGTGGAAGACATGGACTTG
ATTCAAGAGGTGGACGAGATTGACATGCACATTGAGGAGGACAATGAGAT
Ggtacgtaataatgaagagattggagaagaaggagagggagaatgaagac
ttttgtagatcaacttttcttttctacttctaattgataatttatacagC
CGCGAGAAGGAGAGGGAAGCGAGCCGCTTGAGGCGTTGGGCGCCATCACA
CAGGACTTGCAGGGCATGACCTTAAAGTATTCTGCAGTCCGGgtacgtat
ttaaacttgtctttctctttgagactactttctccactctttcattactt
ggatgtaatctcaacgcgttgtctttttaacaactacttgttgctgtact
tccccctcctcccttcctcccctcttatctacagCCCGCCCTCGGGCCGG
ACGTGGACGACATTGACGCCGTGGACGCCGATAACCCCCTTGCATGCGTG
GAGTACGCGGAGAACCAATACACCCACTACCGGGAAAAGGAATGTCGGCC
TGGGTACGACCCGGCCTACATGGCCAAGCAGCCGTACATCAACGTCCGCA
TGCGCGCCATCCTCGTCGACTGGCTCGTGGAGGTTCATTACAAATTCAAG
TGCTGTCCCGAAACCCTCTATTTGACAGTTAATATAATTGATCGTTTCCT
AGACCGAAAGCAGGTCCCTCGGCCCAAGCTGCAACTGGTGGGGGTGACCG
CGTTTTTGATTGCGTGTAAATATGAGGAGATCTACCCGCCGGAGGTAAAG
GAGTTGGTATACATGACGGATGGCGCGTACACTAGGAAGCAAATAATTGA
CATGGAGGCTTTCATGTTGGCGACGCTCAAGTTCCAAGTGACCGTTTGTA
CGACGCATTGTTTCATGGTCCGGTTTCTAAAGGCAGGGCATGCGGATAAC
AAGATTTATTTCTTGGCGAGTTACATCTCGGAAAGGACATTGCAGGAGGT
GGATATCTTGTGTTTTTTGCCGTCCATGGTCGCGGCTGCCGCTGTGTATC
TGGCGCGAAAAAATTGTGGGCTACGCCCGTGGAGTCCGACGTTGACGCAT
TACACCAAATACACAGAGGAGGCGTTGTTGCCGTGTTTGAGGGTGTTGAG
CCCGTGGTTGAATTCGAGAAGTCAGTCCTTGCAGGCCATTCGGAAGAAGT
ATGGGGCGTCCAAATTCATGATGGTCTCCGGAATGGACTTGGAGGGAATG
GTGTAG
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protein sequence of NO12G01680.1

>NO12G01680.1-protein ID=NO12G01680.1-protein|Name=NO12G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MYAARSDSATFGGKHVSAQQQEVPSMGDGPQQPEGADPVQKPGVSTRSGL
ASGASRRALGDITNNRSANTGAGGKQGQQQQNVSKPTTRAALAAAVAAGS
SSITGSSSSSLGGLASAAPVPVLHQQSAAALPHLEEESRRRQQEVEDMDL
IQEVDEIDMHIEEDNEMPREGEGSEPLEALGAITQDLQGMTLKYSAVRPA
LGPDVDDIDAVDADNPLACVEYAENQYTHYREKECRPGYDPAYMAKQPYI
NVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVPRPKLQLV
GVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFMLATLKFQV
TVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFLPSMVAAA
AVYLARKNCGLRPWSPTLTHYTKYTEEALLPCLRVLSPWLNSRSQSLQAI
RKKYGASKFMMVSGMDLEGMV*
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Synonyms
Publications