jgi.p|Nanoce1779_2|592149, gene_5325 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592149
Unique Namegene_5325
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:173699..175915 -

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Properties
Property NameValue
TranscriptId592235
ProteinId592149
Product nameCyclin-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:173699..175915 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000701purine-specific mismatch base pair DNA N-glycosylase activity
GO:0004844uracil DNA N-glycosylase activity
GO:0017065single-strand selective uracil DNA N-glycosylase activity
GO:0019104DNA N-glycosylase activity
GO:0043733DNA-3-methylbase glycosylase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01680NO12G01680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592149mRNA_5325-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592149mRNA_5325Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592149

>mRNA_5325-protein ID=mRNA_5325-protein|Name=jgi.p|Nanoce1779_2|592149|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MAKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNIIDRFLDRKQVP
RPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDGAYTRKQIIDMEAFML
ATLKFQVTVCTTHCFMVRFLKAGHADNKIYFLASYISERTLQEVDILCFL
PSMVAAAAVYLARKNCGLRPWSPTLTHYTKYTEEALLPCLRVLSPWLNSR
SQSLQAIRKKYGASKFMMVSGMDLEGMV*
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Synonyms
Publications