NO12G00760, NO12G00760 (gene) Nannochloropsis oceanica

Overview
NameNO12G00760
Unique NameNO12G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1581
Alignment locationchr12:258538..260118 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:258538..260118 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00760.1NO12G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00760.1NO12G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00760 ID=NO12G00760|Name=NO12G00760|organism=Nannochloropsis oceanica|type=gene|length=1581bp
CGGACCAGTTCGCGAGGGCAAGCAAGAGAACTCCTCGTTGCTTGCTTTGT
GCTTAGTGACCTTAATGTCTGTCCTAAGCGTCTCACCCATCATATTATTC
AGACCCATCCTCTTCGAGATCGAAGTAGATGGGTCTGTAGGGTAGTTCCT
AGCTGGGCAGTGAAGCTTGCCAATGCAAACTGTCACCCGAAACCCAACAC
CCGGCGTGGCTTGCCGCTGCACTCACCACAAGCGCTCATCCATCTCCTCC
CTTCTTTCTACTCTTTCCACCAACCTCACAACGTGTCAGCACACAACTAT
GACCTTCACGCGCGCGTGGCTCAACGCATTGGAAACGATGCCCAGGTCCC
AGgtgagtcgacttgacgggaactggatgacgatggagaggcggaggagc
tggatgaggaggaggattaacacatgcgatcgctaccaccatacccacgt
acccttacagGCCATTATGGGTGCGCTTGGTGTCAGCTTCGTGGCTAGTG
GCGTCCTGTATGTGGGCATCAACCGTGGACgtgagtaaggagagggaggg
gaaagagggagagcgcgattgatatgttttcttatgacttgtattgacag
ggcgcgttgtatgcatgccccaggtctccatttcgatgggcttaagatgc
taagatgctagatgctggagaggaatcagggaggatgggcgtacggaaag
gcagtgggaggaaagaatgtgaaggagaacaaatcttccgaggacatgaa
tattgcactttgttgaccagtcatacaccactatatctctcgcttcctcc
ctcatttcctccctcctgctgttcaaacccacagATAAGCTGCCAAGGAC
TTTTTCTCCCGAGTGGCGCGCCTTGACAGCCGAATACCACAAGCACAACA
ACGCgtacgtgcgagggaacggagaacgtgggagggatggagggagggag
ggcgagtaaacgggaagggcgaatgagtgggcgataaatgtacaatcggt
agaatggttatgcttagggatgttacgctgtctcagtatcatttgcttga
taagttcggtgtgatctgtgagccaccctcattcttttttcacatcgtat
cggctctccaactcactctccttccctccctcccttccatcctctcgcct
gctttcttgtacccagTGATCCCATCTTCTACCATCCCAAGTAAGCGCCC
TCTCCGGTCATCACGAGCTGCATCGTCATGTCGTCATGTTGATGGAACGG
GGGCTAGGAAACAGGAGGTGGAGGTGAAGCAGGAGCGAAATACAAATGGC
AGTTTTGAATGGACGGTGGAAGGACGGAGGGGAAGGAGGACACGACGATG
GATCGACAGCGTCTGGTCGTGTAGTGGATATGTGATGATGAGCAGGAATG
TGGCGGACAGTGGTATGTAGAGAGAACATGGGTGCATCATAAAGACAGTC
GCAACATCCCCCCGAAAAAAAACAAAAAGAGAGTTTGGAGAATTTGAAGA
AGAAGGAAAGCAACAAACAAGCGGGCTTACATAACTACCCTGTGAGTAAC
GCGGAGAACGCGGATACTGGCCCTGAAGGAG
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protein sequence of NO12G00760.1

>NO12G00760.1-protein ID=NO12G00760.1-protein|Name=NO12G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=116bp
MQTVTRNPTPGVACRCTHHKRSSISSLLSTLSTNLTTCQHTTMTFTRAWL
NALETMPRSQAIMGALGVSFVASGVLYVGINRGHKLPRTFSPEWRALTAE
YHKHNNADPIFYHPK*
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Synonyms
Publications