NO12G00680, NO12G00680 (gene) Nannochloropsis oceanica

Overview
NameNO12G00680
Unique NameNO12G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2917
Alignment locationchr12:238070..240986 -

Link to JBrowse

Properties
Property NameValue
DescriptionCoproporphyrinogen iii oxidase chloroplast
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:238070..240986 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004109coproporphyrinogen oxidase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036406Coprogen_oxidase_aer_sf
IPR001260Coprogen_oxidase_aer
Homology
BLAST of NO12G00680 vs. NCBI_GenBank
Match: EWM25951.1 (coproporphyrinogen iii oxidase chloroplast precursor [Nannochloropsis gaditana])

HSP 1 Score: 716.8 bits (1849), Expect = 3.800e-203
Identity = 343/409 (83.86%), Postives = 375/409 (91.69%), Query Frame = 0
Query:    6 ATATTAAAVLLLALPSTSNALASSARPRAMTTGYLHQPMASVGGSRRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            A A   A++LLL    +++A  S+ARPR  T+GY+HQP+A+VGGSRRL+A+AMA R+A  Y+R  VAM+A APTK+    IGW+SHK V  VPESLVRGVEGNESMRRRFEKACREAQ+AICKAVE+CDGGAKFHSDAW+RADGGGGISMVL DGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKG+KPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYL+T+DM HFHGTLK VCDKHD  YYPKFKKWADEYFLIKHRGETRGLGG+FFDDQNDKSPD+HFAFSEE+L TVT+AYLPIIEKHK+DA+TEE+KKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDH P EGSPEAEIM+AFK+ REWV
Sbjct:    3 ALAAAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMA-RSAPCYRRR-VAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: XP_005856032.1 (coproporphyrinogen III oxidase, partial [Nannochloropsis gaditana CCMP526] >EKU20325.1 coproporphyrinogen III oxidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 652.9 bits (1683), Expect = 6.700e-184
Identity = 318/396 (80.30%), Postives = 349/396 (88.13%), Query Frame = 0
Query:   12 AAVLLLALPSTSNALASSARPRAMTTGYLHQPMASVGGSRRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGM-------------------KPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARW 389
            A++LLL    +++A  S+ARPR  T+GY+HQP+A+VGGSRRL+A+AMA R+A  Y+R  VAM+A+APTK+    IGW+SHK V  VPESLVRGVEGNESMRRRFEKACREAQ+AICKAVE+CDGGAKFHSDAW+RADGGGGISMVL DGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKG+                     GERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYL+T+DM HFHGTLK VCDKHD  YYPKFKKWADEYFLIKHRGETRGLGG+FFDDQNDKSPD+HFAFSEE+L TVT+AYLPIIEKHK+DA+TEE+KKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARW
Sbjct:    4 ASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMA-RSAPCYRRR-VAMAASAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLXXXXKXXXXXXXXXXXXXXXXGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARW 397          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: GAX26716.1 (coproporphyrinogen III oxidase [Fistulifera solaris])

HSP 1 Score: 555.4 bits (1430), Expect = 1.400e-154
Identity = 261/350 (74.57%), Postives = 292/350 (83.43%), Query Frame = 0
Query:   71 VAMSAAAPTKKEE---TGIGWNSHKPVTEVPESLVR---GVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            VA   A P +K+E     +GW+SHKPV E P +LVR   G EGN  MR +FEK CR+AQ+AI KA+EE DG  KF  D W RA+GGGG+S VL  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHP+NP CPTMHFNYRYFET+GG WWFGGG DITPSY+D +DMKHFHGT KEVCDKHD  YY +FK+WAD YF+I+HR ETRGLGG+FFDDQND+ P+ HFAFSEE LN+V KAY PIIEKHKND FT+EQK+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY+  P EGSPEAE +DA ++ R WV
Sbjct:   47 VATKEAPPAEKKEAPPVHLGWDSHKPVEEAPSTLVRPEDGPEGNYPMRAKFEKMCRDAQIAITKAIEEIDGEGKFQEDCWTRANGGGGMSRVLSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPKNPFCPTMHFNYRYFETDGGVWWFGGGTDITPSYIDEEDMKHFHGTYKEVCDKHDPKYYQEFKEWADRYFVIQHRNETRGLGGIFFDDQNDRDPEAHFAFSEEALNSVIKAYGPIIEKHKNDEFTQEQKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYNAQPKEGSPEAEFIDACRHPRNWV 396          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: GAX10069.1 (coproporphyrinogen III oxidase [Fistulifera solaris])

HSP 1 Score: 552.4 bits (1422), Expect = 1.200e-153
Identity = 260/350 (74.29%), Postives = 291/350 (83.14%), Query Frame = 0
Query:   71 VAMSAAAPTKKEE---TGIGWNSHKPVTEVPESLVR---GVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            VA   A   +K+E     +GW+SHKPV E P +LVR   G EGN  MR +FEK CR+AQ+AI KA+EE DG  KF  D W RA+GGGG+S VL  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHP+NP CPTMHFNYRYFET+GG WWFGGG DITPSY+D +DMKHFHGT KEVCDKHD  YY +FK+WAD YF+I+HR ETRGLGG+FFDDQND+ P+ HFAFSEE LN+V KAY PIIEKHKND FT+EQK+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY+  P EGSPEAE +DA ++ R WV
Sbjct:   47 VATKEAPTAEKKEAPPVHLGWDSHKPVEEAPSTLVRPEDGPEGNYPMRAKFEKMCRDAQIAITKAIEEIDGEGKFQEDCWTRANGGGGMSRVLSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPKNPFCPTMHFNYRYFETDGGVWWFGGGTDITPSYIDEEDMKHFHGTYKEVCDKHDPKYYQEFKEWADRYFVIQHRNETRGLGGIFFDDQNDRDPEAHFAFSEEALNSVIKAYGPIIEKHKNDEFTQEQKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYNAQPREGSPEAEFIDACRHPRNWV 396          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: OEU23735.1 (coproporphyrinogen III oxidase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 539.7 bits (1389), Expect = 8.200e-150
Identity = 248/332 (74.70%), Postives = 283/332 (85.24%), Query Frame = 0
Query:   86 IGWNSHKPVTEVPESLVR---GVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            +GW+SH  V  +P+SLVR   G +GN  MR +FEK CREAQ  I KA+EE DG A F  DAW R +GGGG+S V+  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKGM PGERVPFFACGLSSVMHP+NPHCPTMHFNYRYFET+GG WWFGGG DITPSY++ DD+KHFHGT KEVCDKHD GYY +FK+WAD YF+I+HR ETRGLGG+FFDDQN+K P++HF FS+E +N+V KAY PIIEKHK+D FT+++K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY+  P EGSPEAE +DA KN REWV
Sbjct:   62 LGWDSHSAVDTIPDSLVREGDGPDGNYPMRSKFEKMCREAQFKITKAIEEIDGEAVFREDAWTRDNGGGGMSRVMSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPKNPHCPTMHFNYRYFETDGGVWWFGGGTDITPSYVNEDDLKHFHGTYKEVCDKHDPGYYKEFKEWADRYFVIQHRNETRGLGGIFFDDQNNKDPEQHFNFSQECVNSVVKAYGPIIEKHKDDPFTQKEKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYNVIPEEGSPEAEFIDACKNPREWV 393          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: XP_005832111.1 (plastid coproporphyrinogen oxidase [Guillardia theta CCMP2712] >EKX45131.1 plastid coproporphyrinogen oxidase [Guillardia theta CCMP2712])

HSP 1 Score: 531.2 bits (1367), Expect = 2.900e-147
Identity = 261/408 (63.97%), Postives = 307/408 (75.25%), Query Frame = 0
Query:   11 AAAVLLLALPSTSNALASSARPRAMTTGYLHQPMASVGGSRRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATER----GVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            AAA+L LAL + +   ++     +  +G      +SV  SRR   L+ AR          +  +A  P +K E G+G++SHK V + P++L R    N +MR +FEK  REAQ  ICK+VE  DGGAKF +DAW R  GGGGIS VL  GKVWEKAGCNLSVVYGSMP EALQAA +R      DRAKG  PGERVPFFACGLSSVMHP+NPHCPTMHFNYRYFETEGG WWFGGG DITP+YL+ DDMK+FHGT KEVCDKHD  +YPKFKKWADEYF IKHRGETRGLGG+FFDD ND+ P++ F F++E    V KAYLPI+E HKND FT+++K+WQ +RRGRY EFNLVYDRGT+FGLKTGGRIESILMSLPETARWEYDH P  GS EAE+++ F+N R+WV
Sbjct:   10 AAALLPLALLAQAALSSAYVTSPSSLSGIRTNFASSVSKSRRAYPLSWAR---------ALRATATKPDQKSE-GLGFDSHKAVDKAPDTLCRDGTANTAMRAKFEKMLREAQDYICKSVENVDGGAKFQTDAWTREGGGGGISRVLTGGKVWEKAGCNLSVVYGSMPSEALQAANDRLKFGATDRAKGYAPGERVPFFACGLSSVMHPKNPHCPTMHFNYRYFETEGGVWWFGGGTDITPAYLNVDDMKYFHGTYKEVCDKHDPEFYPKFKKWADEYFFIKHRGETRGLGGIFFDDLNDRDPEKIFEFAKECAMNVPKAYLPIVEAHKNDPFTQKEKEWQLMRRGRYVEFNLVYDRGTIFGLKTGGRIESILMSLPETARWEYDHRPEPGSKEAEVLEVFRNPRDWV 407          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: EJK64385.1 (hypothetical protein THAOC_14884 [Thalassiosira oceanica] >EJK71933.1 hypothetical protein THAOC_06585 [Thalassiosira oceanica])

HSP 1 Score: 528.9 bits (1361), Expect = 1.400e-146
Identity = 259/399 (64.91%), Postives = 302/399 (75.69%), Query Frame = 0
Query:   25 ALASSARPRAMTTGYLHQPMASVGGSRRLNALAMARRTAHLYQRSVVAMSAAAPTKKE------ETGIGWNSHKPVTEVPESLVR---GVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            A  S+A+  A  TG  H     + G+   ++  + + T   +QRS++    A    K+         IGW+SHKPV  VP+SLVR   G +GN  MR +FE   REAQ++I  A+E+ DG  KF  D W RA+GGGG+S VL  G V+EKAG NLSVVYGSMPQEALQAATERGVDRAKGM PGERVPFFACGLS VMHPRNP CPTMHFNYRYFET+GG WWFGGG DITP+YL+ DDM+HFHGT K+VCD+HD  +YPKFK WAD YF+I HR ETRGLGG+FFDD ND+ P+E F F++E +N+V  AY PIIE HKND FTE+ K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHH   GSPEAEIMDAFK+ R+WV
Sbjct:   13 AALSAAKGFAPITGRSHVRSTGLEGT---SSPTLEKET---FQRSLLEAQLANKNGKKAGADAPPVNIGWDSHKPVDIVPDSLVRPGDGPDGNYPMRSKFESMIREAQISITDAIEKIDGKGKFQEDCWTRANGGGGMSRVLAGGDVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSCVMHPRNPFCPTMHFNYRYFETDGGVWWFGGGTDITPAYLNEDDMRHFHGTYKDVCDRHDPEFYPKFKAWADRYFVISHRNETRGLGGIFFDDMNDRDPEELFEFAKEAVNSVVPAYGPIIEAHKNDPFTEKNKQWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHAEPGSPEAEIMDAFKHPRDWV 405          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: KOO35212.1 (coproporphyrinogen iii oxidase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 528.5 bits (1360), Expect = 1.900e-146
Identity = 258/370 (69.73%), Postives = 289/370 (78.11%), Query Frame = 0
Query:   47 VGGSRRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVE---GNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREW 414
            VG S   NA A   R   ++    +A +   P       I W+SHK V+E PE+LVR  +    N  MRRRFE  CR AQ AICKAVEE D G KF  D W R  GGGGIS VL  G V+EKAGC+LSVVYGSMPQEALQ+AT RG DRAKG  PGERVPFFACGLSSVMHPRNP+ PTMHFNYRYFETEGG WWFGGG D+TPSYL  +D+KHFHGT K+VCDKHD  YY +FKKWADEYF+IKHRGETRGLGG+FFDD N+K P+  FAFS+E L++V  AYLP++ KHK+DAFTE+QK+WQQ+RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY H   EGSPEA+IMDAFKN REW
Sbjct:   20 VGLSSGANAAAANARPGAIH----MAEAPVKPAPSMPAPITWDSHKYVSEAPETLVRDDDLSGANMDMRRRFEANCRRAQNAICKAVEELD-GCKFQEDVWTREGGGGGISRVLAGGNVFEKAGCSLSVVYGSMPQEALQSATSRGADRAKGYAPGERVPFFACGLSSVMHPRNPNAPTMHFNYRYFETEGGVWWFGGGTDLTPSYLFEEDVKHFHGTYKKVCDKHDPTYYARFKKWADEYFVIKHRGETRGLGGIFFDDLNEKEPETLFAFSKECLDSVVPAYLPLVAKHKDDAFTEQQKEWQQMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYCHKVQEGSPEADIMDAFKNPREW 384          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: XP_005762057.1 (coproporphyrinogen oxidase [Emiliania huxleyi CCMP1516] >EOD09628.1 coproporphyrinogen oxidase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 522.3 bits (1344), Expect = 1.400e-144
Identity = 255/376 (67.82%), Postives = 296/376 (78.72%), Query Frame = 0
Query:   45 ASVGGSRRLNALAMARRTAH--LYQRSVVAMSAAAPTKKEE--TGIGWNSHKPVTEVPESLVRGVE---GNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREW 414
            A +G S  L A A A   A+  +  R+ V ++ AA T  E+  +GI W+SH+ V + PESL+R  +    N+ MRRRFE+ CR AQ AICKAV E D GA+F  D W R  GGGGIS VL +G V+EKAGC+LSVVYGSMPQ+ALQ+AT RG DRAKG  PGERVPFFACGLSSVMHPRNP  PTMHFNYRYFET+GG WWFGGG DITP+YL  +D+ HFH T K+VCD HD  YY +FKKWADEYF IKHRGETRGLGG+FFDDQND+ P+  FAFS+E L++V  AYLP++ KHK+D+FT++QK+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY H PA GSPEAEIMDAFK  REW
Sbjct:    5 AVLGASTALLAGASAPAGANGVVRPRAAVLLAEAAATTDEQKASGISWDSHQYVDQAPESLIRDDDLQGANQDMRRRFEENCRRAQNAICKAVSELD-GAEFREDVWTRPGGGGGISRVLCNGNVFEKAGCSLSVVYGSMPQDALQSATSRGADRAKGYAPGERVPFFACGLSSVMHPRNPMAPTMHFNYRYFETDGGVWWFGGGSDITPAYLFEEDIAHFHQTYKDVCDTHDPEYYARFKKWADEYFTIKHRGETRGLGGIFFDDQNDRDPEAIFAFSKECLDSVVPAYLPLVAKHKDDSFTQQQKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYSHEPAAGSPEAEIMDAFKTPREW 379          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: XP_009034238.1 (hypothetical protein AURANDRAFT_52628 [Aureococcus anophagefferens] >EGB10635.1 hypothetical protein AURANDRAFT_52628 [Aureococcus anophagefferens])

HSP 1 Score: 517.3 bits (1331), Expect = 4.400e-143
Identity = 247/358 (68.99%), Postives = 282/358 (78.77%), Query Frame = 0
Query:   65 LYQRSVVAMSAAA----PTKKEETGIG----WNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            +Y+ +++A SA+A     TK   T       W+ H  +   PE+L +G++GN+SMRR+FE   R AQ  I  AVEE DG   F  D W R +GGGGIS V+  GKV+EKAG +LSVVYGSMPQEAL +ATERGVDRA GMKPGERVPFFACGLSSVMHPRNP  PTMHFNYRYFET+GG WWFGGG DITP+YL  +DMKHFHGT KE+CDKHD  YY KFKKWADEYF+IKHRGETRGLGG+FFDDQN+K PD HFAFSEE +N VT+AYLP++ K K+  FTE++K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYD      S EAEIMD FKN REWV
Sbjct:    1 MYKLALLAASASALSRPATKLSATATAPAPTWDDHVAIDAPPETLCKGLDGNDSMRRKFEVMLRAAQNKITSAVEELDGEGTFKQDVWERENGGGGISRVMSGGKVFEKAGVSLSVVYGSMPQEALASATERGVDRAAGMKPGERVPFFACGLSSVMHPRNPMAPTMHFNYRYFETDGGVWWFGGGTDITPAYLFEEDMKHFHGTYKEICDKHDPEYYAKFKKWADEYFVIKHRGETRGLGGIFFDDQNNKDPDTHFAFSEECVNAVTEAYLPVVAKRKDSPFTEKEKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDFKVEPDSKEAEIMDCFKNPREWV 358          
The following BLAST results are available for this feature:
BLAST of NO12G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25951.13.800e-20383.86coproporphyrinogen iii oxidase chloroplast precurs... [more]
XP_005856032.16.700e-18480.30coproporphyrinogen III oxidase, partial [Nannochlo... [more]
GAX26716.11.400e-15474.57coproporphyrinogen III oxidase [Fistulifera solari... [more]
GAX10069.11.200e-15374.29coproporphyrinogen III oxidase [Fistulifera solari... [more]
OEU23735.18.200e-15074.70coproporphyrinogen III oxidase [Fragilariopsis cyl... [more]
XP_005832111.12.900e-14763.97plastid coproporphyrinogen oxidase [Guillardia the... [more]
EJK64385.11.400e-14664.91hypothetical protein THAOC_14884 [Thalassiosira oc... [more]
KOO35212.11.900e-14669.73coproporphyrinogen iii oxidase [Chrysochromulina s... [more]
XP_005762057.11.400e-14467.82coproporphyrinogen oxidase [Emiliania huxleyi CCMP... [more]
XP_009034238.14.400e-14368.99hypothetical protein AURANDRAFT_52628 [Aureococcus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00680.1NO12G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610333gene_9981Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100665g2gene4572Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00680.1NO12G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00680 ID=NO12G00680|Name=NO12G00680|organism=Nannochloropsis oceanica|type=gene|length=2917bp
TAGCATGCATATGTCTCGTGCCCCCGCCCTCCGTCGCACAGGGACCCACT
CCCACATGGTACTTGTTTCCCGCCTGCAAGGCCATTACTACGAGATATCC
TTGAATGTGACCATTCCCTCTACCTTTTTGTGATTCTTTTCATGTCTGTG
TGACCATTGCTAGCCGTGGAAAACCAAAGTATCTATCCTGTTGCACATGT
TGCAGCATCCTGCCCTTCAAGTGCTCCATATACTGCGCCCCCTTCTCTTC
CATTTTGCTTTGTCCCCCCATGCAGTTACGACCAACGACGCTCCTTACCA
CCCTCACCATTACTGTAATTTCTTCCTTCTCATCTTATAGGTCAAGCGAG
ACCCCTTAAAAAAATGCGTGCGAGCCTCGCGACGGCCACGACGGCCGCAG
CCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCCCTCGCTTCCTCC
GCCCGTCCCCGTGCCATGACAACCGGATACCTTCACCAACCCATGGCAAG
CGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGGCCCGTCGCACCG
CTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCCGCCGCCCCCACC
AAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATAAGCCCGTGACTGA
AGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATGAGAGCATGCGTC
GCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGgtagggagagaggaaggg
agggagggagggaggaggaaaccatatgttgcagcaatgggggggtatat
gcatgttcgggggcaaaccacccacgagaggcaatacacagacacatcag
accatcagtccatccaccttccccgtgcaatcttttactcaagcacactt
caccgacgaggtctctacctctgaagtcgtcgaggaaagcgacagaaggg
cactgggtttctccgtccctcccgatttaacgccctgccgtttcgacaca
tgcacaactcacgctttcactcctctcattcattcgcctgtccttccccc
ccccttccccttctgtcaccttccgttctcgtcaaaagTTGGCCATCTGC
AAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCATTCCGACGCCTG
GATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCCTCGGTGATGGGA
AGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTGTATGGGAGCATG
CCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGTAGATAGGGCGAA
GGGGATGAAGCCGGgtgagtgccgagagagagggagggagggaatgagta
ccgatgttggcgtgtgagcataaagagagctaagcaactgcacgtctgtg
gggaggggatatatgtggggggatgtacgcatgggtgtgggcggctttta
ccggcccattcgcaatctttttctcatgcattaatgcggtcttttctcta
tgccaatacaatacacactcaaagatataaatatgggtagcacgacaaac
acccacttactaatactcactaacacacacaaacagGCGAGCGGGTGCCT
TTCTTTGCCTGCGGTTTGAGCTCCGTCATGCACCCTAGGgtaggtacata
tcaaatcaaaccaaaggagggaggagaggaggcagagagggatggaggat
gaagctggtaatgccattggaaaagggttgacgcccatgtaatttgtgtc
ttcagtgttgactgctgaaaccggaaacaacattctgggctaacctcacc
gatttcttgccccctccctccctccctcccttcttcccagAACCCGCACT
GTCCGACCATGCACTTCAACTACCGTTACTTCGAGACAGAGGGCGGGGCT
TGGTGGTTCGGCGGGGGCATGGACATAACTCCCTCCTACCTGGACACCGA
CGACATGAAGCATTTCCACGGCACCTTGAAGGAAGTGTGCGACAAGCACG
ACGAGGGGTATTACCCCAAATTTAAAAAATGGGCCGACGAATATTTTTTG
ATCAAGCACAGGGGCGAGACGCGCGGCTTGGGTGGTGTTTTTTTCGACGA
CCAGAACGATAAGTCTCCTGATGAGCATTTCGCCTTTTCGGAGGAGATGC
TGAATACGGTGACTAAGGCGTATTTGCCCATCATCGAGAAGCATAAGAAC
GATGCCTTCACCGAGGAACAGAAGAAGTGGCAGCAGATCCGGCGTGGCCG
TTACACGGAGTTTAATTTGGTGTATGACAGAGGGACGGTGTTCGGGTTAA
AGACGGGAGGGAGGATTGAGAGTATCCTCATGTCGCTGCCGGAGACGGCT
CGATGGGAGTATGACCACCACCCGGCGGAAGGGAGCCCAGAGGCGGAGAT
CATGGATGCGTTTAAGAACGCGAGGGAATGGGTTTGAGGAGGAGGGAGGG
AGGAAGGGAGGAAGGGAGGGAGCAGAGGAGCGTTGTGGTGAGGGAGGAGA
ATGGGATAACAACGTTTGGAGAAAAGTTCGATGCGCCTGAAGAGAGGATT
CGAAAGGGCTCTTGATATGGTTACGCAGGATAAAGGAGGAGAAGGAGGAG
AAGGAGAAGGAGGAGGATAGGGGGCGTGAAGGCGCCAAGAAAGAACAACA
AGCACAAAGATCAGCTCCAACAACAAACTCAAGCACAACTACAAAGAAGA
AAAGGGAAATAACGATCCTGAAGGAGGCAGCATCACACGGCCCAAATCAC
GTAGATCACATTCAAATAACGAATTCACAGCCTTCTCCTCTTTCGATCTT
CTTCTGCGCACTCTCTGGATTGAACGACCGCTATCTCTCGCCAGCTGTTC
GAGGTAATGCTGTTCGTTGTACGACCCGTCGAAGAGACCGACGATGAGAA
ATAAGGCACTGACGCAT
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protein sequence of NO12G00680.1

>NO12G00680.1-protein ID=NO12G00680.1-protein|Name=NO12G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MRASLATATTAAAVLLLALPSTSNALASSARPRAMTTGYLHQPMASVGGS
RRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPES
LVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGG
GGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGE
RVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYL
DTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVF
FDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIR
RGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPE
AEIMDAFKNAREWV*
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Synonyms
Publications