NO12G00470, NO12G00470 (gene) Nannochloropsis oceanica

Overview
NameNO12G00470
Unique NameNO12G00470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1485
Alignment locationchr12:174318..175802 -

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Properties
Property NameValue
DescriptionPeptide chain release factor 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:174318..175802 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I_II
IPR005139PCRF
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO12G00470 vs. NCBI_GenBank
Match: EWM25973.1 (peptide chain release factor 2 [Nannochloropsis gaditana])

HSP 1 Score: 538.5 bits (1386), Expect = 2.200e-149
Identity = 267/381 (70.08%), Postives = 312/381 (81.89%), Query Frame = 0
Query:  109 PISDPGELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEEGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLRWRSKENVVE 490
            PI DP ELKR L EA  +++ANTA+L+L K  GEI+Y EQEAAQE FW +P +AR  ++ L  L+G VARV+ W +  ED  TAL LWEE   G  E WG+EG+EG+R+L +DL  WEV++LLSGPYD CGCR+ ITAG GG DASDWAGMLLRMY RYGERKGWK+R++E  V  EG G+K A++EVEG+ A+G LKAE+GTHRLVRISPFN+ GKRQTSFAGVE MPILS+E LE+VV+ EG+VEMTT R+GGAGGQNVNKVETAVRLKHLPTGLV RCQEERSQ+LNRKKA  +LK KLL VKE QRVE LAEIRGDL+EASWGQQIRNYVLHPYKLVKDTR+ RET DV+ VL+GGE L+DF+GAYLR R+ E   E
Sbjct:  178 PIQDPAELKRALAEAARAIEANTAALNLPKIMGEIDYCEQEAAQESFWERPGEAREKMSVLAGLQGTVARVDRWRRQYEDVATALALWEE---GGGEEWGEEGKEGMRRLQQDLVTWEVDQLLSGPYDACGCRVAITAGAGGTDASDWAGMLLRMYLRYGERKGWKLRMLEKQVSTEGVGIKGALLEVEGEKAYGLLKAEEGTHRLVRISPFNAAGKRQTSFAGVEVMPILSDERLEDVVLAEGEVEMTTFRSGGAGGQNVNKVETAVRLKHLPTGLVARCQEERSQMLNRKKATALLKAKLLAVKEAQRVEALAEIRGDLIEASWGQQIRNYVLHPYKLVKDTRSGRETPDVSGVLDGGEVLEDFIGAYLRLRAAEGKEE 555          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: AMK98483.1 (plastid peptide chain release factor 2 [Monodopsis sp. MarTras21])

HSP 1 Score: 486.9 bits (1252), Expect = 7.500e-134
Identity = 252/380 (66.32%), Postives = 301/380 (79.21%), Query Frame = 0
Query:  112 DPGELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETAL--LLWEEEEGG---------ESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            DP E+KR+L E    V+AN ASLDL   +GEI+Y+EQEAAQE FW +P KA+ +++ +TRLK  + R  GW+  + D ETAL  L   EEEG          E+    +E     + L++DLERWEVE LL+GPYD  GCR+ ITAGVGGADASDWAG+L+RMY R+ E+KGW  +V+EMS P E FG+KSA++E+EG+ AFG L AEKGTHRLVRISPFN+ GKRQTSFAGVETMPILSEE L+ + I E ++E +TSRAGGAGGQNVNKVETAVRLKH+PTGLVVRCQEER+QL+NRKKA+DMLKEKLLVVKEEQRVEELA+IRGDLVEASWGQQIRNYV HPYKLVKDTRTE ET ++  VL+G   L++FV AYLR
Sbjct:  103 DPAEIKRVLNECIPQVEANIASLDLPHLQGEIDYHEQEAAQEDFWDQPNKAKQIMSTITRLKSTLNRAKGWQSKIGDLETALQFLAEAEEEGAGGGPVMSVEETRDILEEADRTAKALVQDLERWEVESLLNGPYDNAGCRLSITAGVGGADASDWAGILMRMYQRFAEKKGWSCKVIEMS-PAEAFGIKSAIMEIEGEYAFGILAAEKGTHRLVRISPFNAAGKRQTSFAGVETMPILSEETLDNIEIPETELEFSTSRAGGAGGQNVNKVETAVRLKHIPTGLVVRCQEERTQLMNRKKALDMLKEKLLVVKEEQRVEELAQIRGDLVEASWGQQIRNYVFHPYKLVKDTRTEVETSNLQDVLDG--DLEEFVSAYLR 479          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: AMK98479.1 (plastid peptide chain release factor 2 [Vischeria sp. CAUP Q 202])

HSP 1 Score: 466.8 bits (1200), Expect = 8.100e-128
Identity = 240/370 (64.86%), Postives = 291/370 (78.65%), Query Frame = 0
Query:  112 DPGELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEE-EGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            DP E KR L   K  +    +++DL   E + +Y+E+EAAQEGFW  PA+A+ +++ LTR+K  +ARV GW   V D ETAL+L  EE EGG   V  +E    +  L  DL+RW+VE LL+GPYD  GCRM ITAGVGGADASDWAG+LLRMY RY E+K +K+ V +MS   EGFG+KSA +EVEG+ A+G L AEKGTHRLVRISPFN+ GKRQTSFAGV+TMPIL EE L+E+ + E D+E +TSRAGGAGGQNVNKVETAVRLKH+PTG+VVRCQEER+QL+NRK A+DMLKEKLL +KEEQ+VE+L +IRGDLVEASWGQQIRNYV HPYKLVKDTRTE ET ++ SVL+G   +D+FV AYLR
Sbjct:   47 DPMEAKRSLAALKDVIAGCMSNVDLGALEAQADYHEKEAAQEGFWDSPAEAKRIMSSLTRVKSTIARVKGWNTKVLDVETALMLAREEGEGGAEMV--EEAARIIADLDSDLKRWQVESLLNGPYDQAGCRMYITAGVGGADASDWAGILLRMYERYAEKKVFKICVRDMSPAAEGFGIKSATLEVEGEYAYGLLAAEKGTHRLVRISPFNANGKRQTSFAGVDTMPILPEETLDEIDVPESDLEFSTSRAGGAGGQNVNKVETAVRLKHIPTGIVVRCQEERTQLMNRKMALDMLKEKLLAIKEEQKVEQLKDIRGDLVEASWGQQIRNYVFHPYKLVKDTRTEVETSNLQSVLDG--EIDEFVDAYLR 412          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: CBJ29181.1 (peptide chain release factor [Ectocarpus siliculosus])

HSP 1 Score: 383.3 bits (983), Expect = 1.200e-102
Identity = 199/371 (53.64%), Postives = 263/371 (70.89%), Query Frame = 0
Query:  112 DPGELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEEGGESEVWG--QEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            D G+++R L  A+  +  N    D AK EGE+ Y E  +++  FW+    AR  L  L RLK  + R++ W     DAET + L  EEEGG+ E      E  E L+ L  DL+ WE+++LLSG YD CGCR+ I AG GG +A DWA ML RMY R+ +R+G+K ++VE     E  G+KS  ++VEGD A+G+L  EKGTHRLVR SPFN+  KRQTSFAGVE+ PI+ ++ L ++V+ EG++E++T R+GG+GGQNVNKVET VR+KH+PTG+ VRC +ERSQ+LN++ A++MLKEKL+VV +EQ+  +LAEIRGD+VEASWGQQIRNYV HPYKLVKDTRT  ETV V  V++G   LD  + AYLR
Sbjct:   86 DVGDVRRGLSSARERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVE-EESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDLAEIRGDMVEASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDG--DLDALIEAYLR 453          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: CEM01602.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 375.9 bits (964), Expect = 1.900e-100
Identity = 193/368 (52.45%), Postives = 258/368 (70.11%), Query Frame = 0
Query:  115 ELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETAL--LLWEEEEGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            E+KR L   +     N    DL     E++  ++E  +E FW  PA+A  +  +L RLK   + V GW + +EDAE A+  +  EE    E   +  E    +++L   ++ WE+E+L+ GPYD  GCR+ +TAG GG ++ DWA MLLRMY R+ +RKGW+ RVV+ S   E  G+KSA VE+EG+ A+G L  EKGTHRLVRISPFN+ GKRQTSFAGVETMPIL +E + ++ I++ D+E+TT R+GG GGQNVNKVETAVR+ H+PT ++V+C +ERSQL N++ A+ MLKE+LLV+KEEQRV+ELAEIRGD+V+A WG QIRNYVLHPYK+VKDTRT  ET     VL+G   ++ F  +YLR
Sbjct:   83 EVKRTLDTLRERYDRNVELADLPSIGREMDSIQRETTKEDFWDDPARASKLSARLQRLKESRSSVEGWRRSLEDAEAAIDFVTSEELSDAERNEFLAESVTTMKRLSRHMDSWELEKLMDGPYDRVGCRLYVTAGAGGTESCDWADMLLRMYLRFAQRKGWRARVVDRSDGEEA-GIKSAEVEIEGEYAYGLLSGEKGTHRLVRISPFNAQGKRQTSFAGVETMPILPDEDVRDITIDDRDLEVTTMRSGGKGGQNVNKVETAVRILHIPTNIMVKCTQERSQLKNKEIALKMLKERLLVIKEEQRVQELAEIRGDMVQAEWGNQIRNYVLHPYKVVKDTRTGTETSAARDVLDG--DIEAFCESYLR 447          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: AMK98474.1 (plastid peptide chain release factor 2 [Trachydiscus minutus])

HSP 1 Score: 370.2 bits (949), Expect = 1.000e-98
Identity = 185/276 (67.03%), Postives = 225/276 (81.52%), Query Frame = 0
Query:  210 EGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLRWRSKE 486
            E R    +L+ DLE WEVE LL+GPYD  GCR+ +TAGVGG DA DWA +L+RMY R+ ++KG+ VRV + S P +  G+KSAM+E+EG+ AFG L  EKGTHRLVRISPFN+GGKRQTSFAGVETMPIL E+ L++V I + ++E TTSR+GGAGGQNVNKVETAVR++H+PTG+V RC EERSQL+N+KKA+DMLKEKL+++K EQRVEEL EIRGDLVEASWGQQIRNYV HPYKLVKDTRT  ET  +  VL+G   +DDF+ AYLR   K+
Sbjct:    4 EARAVATQLLTDLEIWEVEALLNGPYDHVGCRLYLTAGVGGTDACDWASILMRMYQRFAQKKGFSVRVTDTS-PGDVCGIKSAMLEIEGENAFGILSGEKGTHRLVRISPFNAGGKRQTSFAGVETMPILPEDELDQVDIPDSELEYTTSRSGGAGGQNVNKVETAVRVRHIPTGIVARCTEERSQLMNKKKALDMLKEKLMMIKAEQRVEELDEIRGDLVEASWGQQIRNYVFHPYKLVKDTRTGYETSSLQEVLDG--EIDDFIKAYLRGGRKD 276          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: WP_096418966.1 (peptide chain release factor 2 [Synechococcus sp. NIES-970])

HSP 1 Score: 369.4 bits (947), Expect = 1.800e-98
Identity = 198/366 (54.10%), Postives = 259/366 (70.77%), Query Frame = 0
Query:  115 ELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEEGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            +LKR L   +A +      LDL   + +I   EQ+AAQ  FW     A+ +L +LT +KG VA+ + W+   EDA+    L  E    E      E  + L KL ++L RWE++++LSG YD  G  + I AG GG DA DWA MLLRMYTR+ E++G+K+R+ E+S   E  G+KSA +EVEG  AFG+LK EKGTHRLVRISPFN+ GKRQTSFAGVE MP+L +EA+ +V I + D+E+TTSRAGG GGQNVNKVETAVR+ HLPTG+ VRC +ERSQL N++KA+ +LK KLL++ +EQR +E+AEIRGD+VEA+WG QIRNYV HPY++VKD RT  ET D+A V++G   L+ F+ A LR
Sbjct:    5 DLKRSLELTQAHLGKTQDYLDLKTLDAKIFDLEQQAAQPEFWDDQQAAQVILQELTDIKGTVAQYHQWQAQFEDAQAIAELLAE---AEDPALLTEAVDSLAKLQKELNRWELQQMLSGEYDNFGAVLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKIRLAEISEGDEA-GLKSATLEVEGRYAFGYLKHEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGDEAV-KVDIPDKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRTKEIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNHETTDIAGVMDG--DLEAFIEASLR 363          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: WP_051352868.1 (peptide chain release factor 2 [Synechococcus sp. NKBG15041c])

HSP 1 Score: 364.4 bits (934), Expect = 5.600e-97
Identity = 192/346 (55.49%), Postives = 250/346 (72.25%), Query Frame = 0
Query:  135 DLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEEGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            DL   + +I   EQ+AAQ  FW     A+ +L +LT +KG VA+ + W+   EDA+    L  E    E      E  + L KL ++L RWE++++LSG YD  G  + I AG GG DA DWA MLLRMYTR+ E++G+K+R+ E+S   E  G+KSA +EVEG  AFG+LK EKGTHRLVRISPFN+ GKRQTSFAGVE MP+L +EA+ +V I + D+E+TTSRAGG GGQNVNKVETAVR+ HLPTG+ VRC +ERSQL N++KA+ +LK KLL++ +EQR +E+AEIRGD+VEA+WG QIRNYV HPY++VKD RT  ET D+A V++G   L+ F+ A LR
Sbjct:    3 DLKTLDAKIFDLEQQAAQPEFWDDQQAAQVILQELTDIKGTVAQYHQWQAQFEDAQAIAELLAE---AEDPALLTEAVDSLAKLQKELNRWELQQMLSGEYDNFGAVLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKIRLAEISEGDEA-GLKSATLEVEGRYAFGYLKHEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGDEAV-KVDIPDKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRTKEIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNHETTDIAGVMDG--DLEAFIEASLR 341          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: WP_040898480.1 (peptide chain release factor 2 [Xenococcus sp. PCC 7305])

HSP 1 Score: 363.6 bits (932), Expect = 9.600e-97
Identity = 192/346 (55.49%), Postives = 254/346 (73.41%), Query Frame = 0
Query:  135 DLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEEGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            D+   + +I+  EQ AAQ  FWS+ + A+  L +L  LK  +A+   W  +++DA+    L E E     +   +E +  L +L ++L+ WE+++LLSG YD  G  + I AG GG DA DWA MLLRMYTR+GE++G+KVR+VE S   E  G+KSA +E+EG  A+G+LKAEKGTHRLVRISPFN+ GKRQTSFAG+E MP L +E++ E+ I E D+E+TTSRAGG GGQNVNKVETAVR+ HLPTGL VRC +ERSQL N++KA+ +LK KLLVV EEQR +++AEIRGD+VEA+WG QIRNYV HPY++VKD RTE +T D+  V++G   L+ F+ AYLR
Sbjct:    3 DIPVLKAKIHDLEQVAAQPEFWSQQSTAQKTLQELNDLKSNLAQYQQWHDVLDDAQAIAELLELE---TDQALAEEAQTSLIQLKQELDLWELQQLLSGTYDSRGAILTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVRLVEESAGDEA-GIKSATLEIEGRYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPNLGDESI-ELEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALALLKAKLLVVVEEQRAQQVAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTELDTGDINDVMDG--NLNPFIEAYLR 341          
BLAST of NO12G00470 vs. NCBI_GenBank
Match: WP_106456567.1 (peptide chain release factor 2 [Aphanothece hegewaldii] >PSF37702.1 peptide chain release factor 2 [Aphanothece hegewaldii CCALA 016])

HSP 1 Score: 363.6 bits (932), Expect = 9.600e-97
Identity = 191/346 (55.20%), Postives = 248/346 (71.68%), Query Frame = 0
Query:  135 DLAKFEGEINYYEQEAAQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEEGGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGGADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDMAFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIEEGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRKKAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVKDTRTERETVDVASVLEGGEGLDDFVGAYLR 481
            DL   + +I   EQ AAQ  FW  P  A++ L KL   K  + + + W+  +ED +    L E E   E +   +E    + +L +DL+RWE+++LLSG YDG G  + I AG GG DA DWA MLLRMYTR+ E++G+KVR+ E+S   E  G+KSA +E+EG  A+G+LK+EKGTHRLVRISPFN+ GKRQTSFAGVE MP L  +++ ++ I E D+E+TTSRAGG GGQNVNKVETAVR+ HLPTGL VRC +ERSQL N++KA+ +LK KLL++ +EQR +E+AEIRGD+VEA+WG QIRNYV HPY++VKD RT  ET DV  V+ G   LD F+ AYLR
Sbjct:    3 DLKSLKAQIQDLEQVAAQPTFWDSPETAQSTLQKLDEAKSKIEQYHKWKSQLEDTKAIAELLELE---EDQSLSEEAENTVTQLKQDLDRWELQQLLSGLYDGEGAVLTINAGAGGTDAQDWADMLLRMYTRWAEKQGYKVRLAEISEGDEA-GIKSATLEIEGRYAYGYLKSEKGTHRLVRISPFNANGKRQTSFAGVEIMPALDNDSI-KLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIVQEQRAQEIAEIRGDMVEAAWGTQIRNYVFHPYQMVKDLRTNVETSDVTGVMNG--DLDPFIEAYLR 341          
The following BLAST results are available for this feature:
BLAST of NO12G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25973.12.200e-14970.08peptide chain release factor 2 [Nannochloropsis ga... [more]
AMK98483.17.500e-13466.32plastid peptide chain release factor 2 [Monodopsis... [more]
AMK98479.18.100e-12864.86plastid peptide chain release factor 2 [Vischeria ... [more]
CBJ29181.11.200e-10253.64peptide chain release factor [Ectocarpus siliculos... [more]
CEM01602.11.900e-10052.45unnamed protein product [Vitrella brassicaformis C... [more]
AMK98474.11.000e-9867.03plastid peptide chain release factor 2 [Trachydisc... [more]
WP_096418966.11.800e-9854.10peptide chain release factor 2 [Synechococcus sp. ... [more]
WP_051352868.15.600e-9755.49peptide chain release factor 2 [Synechococcus sp. ... [more]
WP_040898480.19.600e-9755.49peptide chain release factor 2 [Xenococcus sp. PCC... [more]
WP_106456567.19.600e-9755.20peptide chain release factor 2 [Aphanothece hegewa... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009941NSK009941Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00470.1NO12G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610219gene_9956Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100557g2gene4549Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00470.1NO12G00470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00470 ID=NO12G00470|Name=NO12G00470|organism=Nannochloropsis oceanica|type=gene|length=1485bp
ATGACGGTCATAAGGCCTGGGGCAAGCAGTGGCCATGTAAGGAGCAGACG
GAGAAGACCAAGACCCTACGGCCTGCTTCCCCTCCTCCTTTCCGCATGCA
TCCTCCTGGAAGTGAGACCATGCAACGCCTTTTGCCTCCCTTTGCCAACG
TCCTCCCTCTTCTCTTGCAGCAGTAGCAGCAGCAGTAGCAGCAGCAGTAG
CACCGAGCCATCTGCGCCAATTCCTAGAATAAGAAGAGCGCGAGCACTGA
TGGTTTCCTTCTCCTCAGCCTCCCCATCCTCCCCCTCCTCCTCCTCATCC
TCCTCCCTCTCCTTCTCCTCCGCCCCCATCTCCGATCCCGGTGAGCTCAA
GCGCCTGCTAATTGAAGCCAAAGCTTCCGTCCAAGCGAACACCGCCTCCT
TAGACCTAGCTAAATTCGAAGGAGAAATCAATTATTACGAGCAAGAGGCC
GCCCAGGAAGGTTTCTGGAGCAAGCCGGCAAAAGCCCGGGCAGTTCTTAC
TAAATTAACGCGATTAAAAGGCATCGTGGCACGGGTGAATGGATGGGAGA
AAATGGTGGAGGATGCGGAGACGGCATTGTTGTTGTGGGAGGAGGAGGAA
GGGGGGGAGAGCGAGGTGTGGGGGCAGGAAGGGAGGGAGGGCTTGCGGAA
GTTGATGGAGGACTTGGAGAGGTGGGAAGTGGAGAGACTTTTATCTGGAC
CTTATGATGGATGTGGATGTCGTATGCTGATTACGGCAGGGGTGGGGGGG
GCAGATGCGAGTGATTGGGCAGGGATGCTTTTGCGGATGTACACGAGGTA
CGGGGAGAGGAAGGGGTGGAAGGTGAGGGTAGTTGAAATGAGCGTGCCGG
TGGAGGGTTTTGGGGTGAAGAGTGCGATGGTGGAGGTGGAGGGAGACATG
GCGTTTGGGTTTCTGAAGGCGGAGAAGGGGACGCATCGGCTGGTGAGAAT
CAGTCCGTTCAACAGTGGAGGCAAGAGGCAGACGAGTTTTGCAGGGGTTG
AGACCATGCCGATCTTGTCCGAGGAGGCGTTGGAGGAGGTGGTGATTGAG
GAGGGGGACGTGGAGATGACCACGTCAAGGGCTGGAGGGGCAGGGGGTCA
GAACGTTAACAAAGTCGAGACGGCCGTGCGGCTGAAGCATCTGCCGACGG
GCTTGGTTGTGAGGTGTCAGGAAGAACGTTCGCAGTTGCTGAACCGGAAG
AAGGCGATGGATATGTTGAAAGAGAAGCTGTTGGTGGTAAAGGAGGAGCA
GAGGGTGGAGGAGCTGGCGGAGATTAGAGGAGACCTAGTGGAGGCGAGCT
GGGGACAGCAGATCCGGAATTACGTTTTGCATCCTTATAAGCTGGTCAAA
GACACGCGGACGGAGAGGGAGACCGTGGATGTAGCGAGCGTCTTGGAGGG
GGGGGAGGGCCTGGATGACTTCGTGGGTGCGTATTTGCGGTGGAGGTCCA
AAGAAAATGTCGTAGAAACGTTGGTTGAAGGATAA
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protein sequence of NO12G00470.1

>NO12G00470.1-protein ID=NO12G00470.1-protein|Name=NO12G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MTVIRPGASSGHVRSRRRRPRPYGLLPLLLSACILLEVRPCNAFCLPLPT
SSLFSCSSSSSSSSSSSTEPSAPIPRIRRARALMVSFSSASPSSPSSSSS
SSLSFSSAPISDPGELKRLLIEAKASVQANTASLDLAKFEGEINYYEQEA
AQEGFWSKPAKARAVLTKLTRLKGIVARVNGWEKMVEDAETALLLWEEEE
GGESEVWGQEGREGLRKLMEDLERWEVERLLSGPYDGCGCRMLITAGVGG
ADASDWAGMLLRMYTRYGERKGWKVRVVEMSVPVEGFGVKSAMVEVEGDM
AFGFLKAEKGTHRLVRISPFNSGGKRQTSFAGVETMPILSEEALEEVVIE
EGDVEMTTSRAGGAGGQNVNKVETAVRLKHLPTGLVVRCQEERSQLLNRK
KAMDMLKEKLLVVKEEQRVEELAEIRGDLVEASWGQQIRNYVLHPYKLVK
DTRTERETVDVASVLEGGEGLDDFVGAYLRWRSKENVVETLVEG*
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Synonyms
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