NO11G02610, NO11G02610 (gene) Nannochloropsis oceanica

Overview
NameNO11G02610
Unique NameNO11G02610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1248
Alignment locationchr11:816808..818055 -

Link to JBrowse

Properties
Property NameValue
Descriptionsignal recognition particle receptor alpha subunit family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:816808..818055 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR036225SRP/SRP_N
IPR013822Signal_recog_particl_SRP54_hlx
IPR003593AAA+_ATPase
IPR000897SRP54_GTPase_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005783endoplasmic reticulum
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: EWM24939.1 (signal recognition particle receptor [Nannochloropsis gaditana])

HSP 1 Score: 589.3 bits (1518), Expect = 9.100e-165
Identity = 310/392 (79.08%), Postives = 350/392 (89.29%), Query Frame = 0 
Query:   25 GKKKTTWHDGTGRVSKSAMEALDRSKRVESPNSSKEDIQN-AALREMQATYLPSTGEVPQWEEDD-APHFLEDSTXXXXXXXXXXXXXXXXXXXXXTGNAVLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLF 415
            GKK TTWHDG+GR+SKSAMEALDRSKRVES +   ED QN AA +E +ATY+P+ GE P+WE+++ A  FL+       XXXXXXXXX        TGNAVLS+ ++DPI+EEMR +LI KNVASEIA DI +SVR+SLVGQKLPSLT VKTVVREALE+AIVRVLTP+KSTD+LR+VM AKAEGRPY++VFVGINGVGKSTSLSK+CYYLK+HGL+VLIAACDTFRSGAVEQLKVHARCLEV+L+DKGYHKDPAAVAK AIKE  + G+DVVLVDTAGRMQNKEPLMRALAKLVSDN+PDLV+FVGEALVGNDGIDQL++FN+ALANYSPPGK HQIDGI+LTKFDTVDEKVGAALSM YKTGQPI+FVGTGQKYTHLKKLNVN+ILNCLF
Sbjct:  263 GKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSXXXXXXXXXFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: XP_005853460.1 (signal recognition particle receptor subunit alpha [Nannochloropsis gaditana CCMP526] >EKU22903.1 signal recognition particle receptor subunit alpha [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 561.2 bits (1445), Expect = 2.600e-156
Identity = 297/375 (79.20%), Postives = 335/375 (89.33%), Query Frame = 0 
Query:   43 MEALDRSKRVESPNSSKEDIQN-AALREMQATYLPSTGEVPQWEEDD-APHFLEDSTXXXXXXXXXXXXXXXXXXXXXTGNAVLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            MEALDRSKRVES +   ED QN AAL+E +ATY+P+ GE P+WE+++ A  FL+       XXXXXXXXX        TGNAVLS+ ++DPI+EEMR +LI KNVASEIA DI +SVR+SLVGQKLPSLT VKTVVREALE+AIVRVLTP+KSTD+LR+VM AKAEGRPY++VFVGINGVGKSTSLSK+CYYLK+HGL+VLIAACDTFRSGAVEQLKVHARCLEV+L+DKGYHKDPAAVAK AIKE  + G+DVVLVDTAGRMQNKEPLMRALAKLVSDN+PDLV+FVGEALVGNDGIDQL++FN+ALANYSPPGK HQIDGI+LTKFDTVDEKVGAALSM YKTGQPI+FVGTGQKYTHLKKLNVN+ILNCLFR
Sbjct:    1 MEALDRSKRVESVDGLAEDHQNEAALQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSXXXXXXXXXFSKLFARMTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFR 375
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: CBJ30645.1 (SRP101, alpha subunit of the signal recognition particle receptor [Ectocarpus siliculosus])

HSP 1 Score: 448.7 bits (1153), Expect = 1.900e-122
Identity = 228/399 (57.14%), Postives = 293/399 (73.43%), Query Frame = 0 
Query:   29 TTWHDGTG---RVSKSAMEALDRSKRVESPNSSKEDIQNAALREMQATYLPSTGEVPQWEEDDAPHFLED----------STXXXXXXXXXXXXXXXXXXXXXTGNAVLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLF 415
            T WHDG+G   ++ + A EALDRSKR E     +       + EM++TY+P  GE  +W+E ++    +D                                 TG  VL   DL+P++ +MR  L+ +NVASE+A+DI  SV+++L+ QKL S TRVKT V+ AL++A+ RVLTPKKSTD+LREV  A++ G+ Y++ FVGINGVGKSTSL+K+ YYLK +G+KVLIAACDTFRSGAVEQL+VH RCL+V LF+KGY +D +AVA++A+K   E GYD VL+DTAGRMQN EPLMRAL+KL+++NEP+LVLFVGEALVGNDG++QL MFN+ALAN SP G+ HQIDG++LTKFDT+D KVGAALSM YKTGQPI+FVGTGQKYTHL+KLNVN ++  LF
Sbjct:  195 TVWHDGSGSGKQLGEKAKEALDRSKREEGDAGDE-----VLMAEMRSTYMPEDGETAEWDEPESDLDEDDILDLQASENADENKGSWAGTLLKTSLGGFLHGLTGTKVLEERDLEPVMTKMREQLMGRNVASEVANDITASVQATLIDQKLKSFTRVKTAVQSALKEAVSRVLTPKKSTDVLREVKAARSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHCRCLDVPLFEKGYARDSSAVAREAVKHAAEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRYHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALF 588
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: XP_024586467.1 (signal recognition particle receptor subunit alpha [Plasmopara halstedii] >CEG50098.1 signal recognition particle receptor subunit alpha [Plasmopara halstedii])

HSP 1 Score: 428.3 bits (1100), Expect = 2.700e-116
Identity = 210/297 (70.71%), Postives = 255/297 (85.86%), Query Frame = 0 
Query:  119 TGNAVLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            TGN +L   DL  ++  M  +LITKNVASE+A ++ +SV +++VGQKL S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ A++EGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+KV+IAACDTFRSGAVEQL  HA+ L+V+LF +GY KDPA+VAK+A+K G E GYD VL+DTAGRMQN EPLMRALAKLVS NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPIMFVGTGQKYTHLKKLNV  +L  L +
Sbjct:  306 TGNKILEREDLKSVITPMHQMLITKNVASEVADELCESVIATVVGQKLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQARSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGIKVMIAACDTFRSGAVEQLNQHAKVLDVKLFQRGYAKDPASVAKEAVKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSKNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLLQ 602
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: OWZ24174.1 (Signal recognition particle receptor subunit alpha [Phytophthora megakarya])

HSP 1 Score: 427.2 bits (1097), Expect = 6.000e-116
Identity = 210/293 (71.67%), Postives = 254/293 (86.69%), Query Frame = 0 
Query:  123 VLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            +L   DL+P++  M  +LI+KNVASE+A ++ +SV +++VGQ+L S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ AKAEGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+VELF KGY KDPA+VAK+AIK G E GYD VL+DTAGRMQN EPLMRALAKLVS+NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPIMFVGTGQKYTHLKKLNV  +L  L +
Sbjct:  268 ILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLLQ 560
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: XP_008907399.1 (hypothetical protein PPTG_13455 [Phytophthora parasitica INRA-310] >ETI43779.1 hypothetical protein F443_11377 [Phytophthora parasitica P1569] >ETK83844.1 hypothetical protein L915_11067 [Phytophthora parasitica] >ETL37259.1 hypothetical protein L916_10965 [Phytophthora parasitica] >ETL90398.1 hypothetical protein L917_10873 [Phytophthora parasitica] >ETM43703.1 hypothetical protein L914_10900 [Phytophthora parasitica] >ETN07023.1 hypothetical protein PPTG_13455 [Phytophthora parasitica INRA-310] >ETP13590.1 hypothetical protein F441_11294 [Phytophthora parasitica CJ01A1] >ETP41653.1 hypothetical protein F442_11262 [Phytophthora parasitica P10297])

HSP 1 Score: 426.0 bits (1094), Expect = 1.300e-115
Identity = 209/293 (71.33%), Postives = 254/293 (86.69%), Query Frame = 0 
Query:  123 VLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            +L   DL+P++  M  +LI+KNVASE+A ++ +SV +++VGQ+L S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ AK+EGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+VELF KGY KDPA+VAK+AIK G E GYD VL+DTAGRMQN EPLMRALAKLVS+NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPIMFVGTGQKYTHLKKLNV  +L  L +
Sbjct:  309 ILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLLQ 601
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: ETO72455.1 (hypothetical protein F444_11447 [Phytophthora parasitica P1976])

HSP 1 Score: 426.0 bits (1094), Expect = 1.300e-115
Identity = 209/293 (71.33%), Postives = 254/293 (86.69%), Query Frame = 0 
Query:  123 VLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            +L   DL+P++  M  +LI+KNVASE+A ++ +SV +++VGQ+L S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ AK+EGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+VELF KGY KDPA+VAK+AIK G E GYD VL+DTAGRMQN EPLMRALAKLVS+NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPIMFVGTGQKYTHLKKLNV  +L  L +
Sbjct:  309 ILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLLQ 601
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: KUF64897.1 (Signal recognition particle receptor subunit alpha [Phytophthora nicotianae])

HSP 1 Score: 426.0 bits (1094), Expect = 1.300e-115
Identity = 209/293 (71.33%), Postives = 254/293 (86.69%), Query Frame = 0 
Query:  123 VLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            +L   DL+P++  M  +LI+KNVASE+A ++ +SV +++VGQ+L S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ AK+EGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+VELF KGY KDPA+VAK+AIK G E GYD VL+DTAGRMQN EPLMRALAKLVS+NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPIMFVGTGQKYTHLKKLNV  +L  L +
Sbjct:  309 ILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLLQ 601
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: XP_009515733.1 (hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae] >EGZ28458.1 hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae])

HSP 1 Score: 425.2 bits (1092), Expect = 2.300e-115
Identity = 209/291 (71.82%), Postives = 252/291 (86.60%), Query Frame = 0 
Query:  123 VLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCL 414
            +L   DL+P++  M  +LI+KNVASE+A ++ +SV +++VGQ+L S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ AKAEGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+VELF KGY KDPA+VAK+AIK G E GYD VL+DTAGRMQN EPLMRALAKLVS+NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS     H+IDGI++TKFDT+D+KVGAA+SM YKTGQP+MFVGTGQKYTHLKKLNV  +L  L
Sbjct:  259 ILEREDLEPVITPMHQMLISKNVASEVADELCESVVTTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRRVPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPVMFVGTGQKYTHLKKLNVRTVLRHL 549
[Close]
BLAST of NO11G02610 vs. NCBI_GenBank
Match: XP_002906671.1 (signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4] >EEY66072.1 signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4])

HSP 1 Score: 424.9 bits (1091), Expect = 3.000e-115
Identity = 208/293 (70.99%), Postives = 254/293 (86.69%), Query Frame = 0 
Query:  123 VLSSTDLDPILEEMRTILITKNVASEIAHDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREVMGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRSGAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTAGRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALANYSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTHLKKLNVNMILNCLFR 416
            +L   DL+P++  M  +LI+KNVASE+A ++ +SV +++VGQ+L S TR+ TVVR+ALE A++R+LTPKKSTD+LRE++ AK+EGR Y+IVFVG+NGVGKSTSLSK+CYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+VELF KGY KDPA+VAK+AIK G E GYD VL+DTAGRMQN EPLMRALAKLVS+NEPDLVLFVGEALVGNDGIDQLSMF+RALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPIMFVGTGQKYTHLKKLNV  ++  L +
Sbjct:  257 ILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVVTKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVMRHLLQ 549
The following BLAST results are available for this feature:
BLAST of NO11G02610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24939.19.100e-16579.08signal recognition particle receptor [Nannochlorop... [more]
XP_005853460.12.600e-15679.20signal recognition particle receptor subunit alpha... [more]
CBJ30645.11.900e-12257.14SRP101, alpha subunit of the signal recognition pa... [more]
XP_024586467.12.700e-11670.71signal recognition particle receptor subunit alpha... [more]
OWZ24174.16.000e-11671.67Signal recognition particle receptor subunit alpha... [more]
XP_008907399.11.300e-11571.33hypothetical protein PPTG_13455 [Phytophthora para... [more]
ETO72455.11.300e-11571.33hypothetical protein F444_11447 [Phytophthora para... [more]
KUF64897.11.300e-11571.33Signal recognition particle receptor subunit alpha... [more]
XP_009515733.12.300e-11571.82hypothetical protein PHYSODRAFT_552205 [Phytophtho... [more]
XP_002906671.13.000e-11570.99signal recognition particle receptor subunit alpha... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL112nonsL112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR020ngnoR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001983NSK001983Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02610.1NO11G02610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591575gene_5157Nannochloropsis oceanica (N. oceanica CCMP1779)gene
SRP101gene5555Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02610.1NO11G02610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02610 ID=NO11G02610|Name=NO11G02610|organism=Nannochloropsis oceanica|type=gene|length=1248bp
ATGGGGGCAGGTAATAGTTCGGACAAGGCGGTTGTGGAAGGAGGAGGAGG
AGGAGGGGGAAAGCTTGGTGTGGGAAAGAAGAAGACTACTTGGCATGATG
GGACAGGAAGAGTGAGTAAATCGGCGATGGAGGCATTGGATCGATCGAAG
CGGGTGGAGAGCCCGAATAGCTCGAAAGAAGACATTCAGAACGCAGCACT
TAGGGAGATGCAAGCGACGTACTTGCCGTCCACGGGCGAGGTTCCCCAGT
GGGAAGAAGACGATGCCCCCCACTTTCTCGAGGATTCTACCCCGTCGTCA
ACTTCTTCCTCCACCTCTTCCTCCTCATTCTTCTCGAAGCTTTTCGCCCA
AGTCACGGGCAATGCTGTCTTGTCCTCGACAGACTTAGACCCCATCCTCG
AAGAAATGCGTACTATACTCATCACCAAGAACGTCGCCTCCGAGATCGCG
CATGACATCATCGATTCGGTCCGTTCGTCCCTTGTCGGTCAAAAACTCCC
ATCGTTGACACGTGTCAAAACGGTGGTAAGGGAAGCTTTAGAAAAGGCGA
TTGTGCGTGTATTGACCCCAAAAAAATCAACGGATATCCTAAGGGAGGTC
ATGGGCGCGAAGGCGGAGGGAAGGCCGTACACAATCGTATTTGTAGGGAT
CAATGGAGTGGGGAAATCAACGAGTTTGTCCAAGATCTGCTATTACTTGA
AGAGGCATGGCTTAAAAGTGTTGATTGCGGCATGTGACACCTTCCGGTCG
GGGGCAGTGGAGCAGCTGAAGGTCCATGCCCGGTGCTTGGAGGTGGAGTT
GTTCGACAAGGGATACCACAAGGACCCGGCCGCCGTGGCCAAGGACGCGA
TCAAGGAGGGGAGGGAAGGAGGATATGACGTAGTGCTGGTGGATACCGCT
GGGAGGATGCAGAACAAGGAGCCGTTGATGCGGGCGTTGGCCAAGTTGGT
GTCGGACAATGAGCCTGATTTGGTGTTATTTGTAGGCGAGGCTCTGGTAG
GGAACGATGGGATTGACCAGCTCTCTATGTTTAACCGGGCCTTGGCGAAT
TACTCGCCACCGGGTAAGATGCACCAGATCGACGGAATCATGCTCACCAA
ATTCGACACGGTGGACGAGAAGGTGGGGGCGGCGCTGTCGATGAGCTACA
AGACGGGACAACCGATTATGTTCGTGGGCACAGGCCAGAAATATACGCAT
TTGAAGAAGCTGAATGTGAACATGATTTTGAATTGCTTGTTCAGGTAG
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protein sequence of NO11G02610.1

>NO11G02610.1-protein ID=NO11G02610.1-protein|Name=NO11G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bp
MGAGNSSDKAVVEGGGGGGGKLGVGKKKTTWHDGTGRVSKSAMEALDRSK
RVESPNSSKEDIQNAALREMQATYLPSTGEVPQWEEDDAPHFLEDSTPSS
TSSSTSSSSFFSKLFAQVTGNAVLSSTDLDPILEEMRTILITKNVASEIA
HDIIDSVRSSLVGQKLPSLTRVKTVVREALEKAIVRVLTPKKSTDILREV
MGAKAEGRPYTIVFVGINGVGKSTSLSKICYYLKRHGLKVLIAACDTFRS
GAVEQLKVHARCLEVELFDKGYHKDPAAVAKDAIKEGREGGYDVVLVDTA
GRMQNKEPLMRALAKLVSDNEPDLVLFVGEALVGNDGIDQLSMFNRALAN
YSPPGKMHQIDGIMLTKFDTVDEKVGAALSMSYKTGQPIMFVGTGQKYTH
LKKLNVNMILNCLFR*
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Synonyms
Publications