NO11G02560, NO11G02560 (gene) Nannochloropsis oceanica

Overview
NameNO11G02560
Unique NameNO11G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3154
Alignment locationchr11:806258..809411 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal protein L1p/L10e family
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:806258..809411 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023674Ribosomal_L1-like
IPR028364Ribosomal_L1/biogenesis
Homology
BLAST of NO11G02560 vs. NCBI_GenBank
Match: EWM24932.1 (hypothetical protein Naga_100086g5 [Nannochloropsis gaditana])

HSP 1 Score: 445.3 bits (1144), Expect = 2.600e-121
Identity = 227/280 (81.07%), Postives = 253/280 (90.36%), Query Frame = 0
Query:   38 TSPRAATSTITPLPPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKP 318
            T     T+    LPPSR+DA QA++AV+ALLQH A+HQA VASKK  KQDLLASEAGDY+L+Q+ALAKIPERVSPKPVP+ LPHPLHGSG DD+E+HAVCLIVKE DK KV+RAL  MKM+GV EVVGLQELRTDY+EFQERR+LRDAFDLFLVDDRILPLLGKALGKTFFSKKKHP++LK+GGLLSSNP +MATVGKRIIAAQQRTHLYRNHGNCL++KVAKTSF PA  +ANVLAGIE AVEA PGKWKNVMAIS+KTS+SVALPLYQRLPQYL+KKP
Sbjct:   37 TDEAQTTADKLTLPPSRVDATQATRAVEALLQHNARHQALVASKK-SKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYLIKKP 315          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: CBJ27277.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 188.3 bits (477), Expect = 5.700e-44
Identity = 108/254 (42.52%), Postives = 153/254 (60.24%), Query Frame = 0
Query:   56 DALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRL 310
            D  Q  +A +ALL+H       V S   GKQ L+  E G+ VL Q++L KIP  V  KPVPI +PHPL        E+  +CLIVK++ K  +K       +EG+++++ L +LRT Y++F++RR+L   FDLFL DDRILP+L KALGKTF   KK P+ +K+           A+  K+I  A+    L  +HG+C A+K+A TS     V+ N++ G+   VE +P KWKNV AI++K S SVALP+Y  +
Sbjct:    5 DEAQVRRAARALLKH-------VNSSAAGKQSLIEDE-GEVVLAQISLHKIPGDVKAKPVPIAIPHPLR-----KREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKL--------ERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNI 237          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: OQR92582.1 (hypothetical protein ACHHYP_03487 [Achlya hypogyna])

HSP 1 Score: 154.5 bits (389), Expect = 9.100e-34
Identity = 94/257 (36.58%), Postives = 145/257 (56.42%), Query Frame = 0
Query:   54 RIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLP 311
            ++D  Q ++AV AL ++ AK     A+    KQ L+  E    + + V  A IP + S K +PI LPH +   G         CL VK+ DK ++K ALA   + G+++V+G+++L+  + +F++RR+L+ +F  FL DDR+LP L   LGK FF  KK PI++ + G   S+P   A  G         T ++ + G C  +KVA      A ++ N+L+G E  V  +P  WKN+ +IS+KT+ SVALP+Y  LP
Sbjct:    3 QLDRDQVTRAVGALKEYLAK-----AASANAKQALV--EDAKVISLIVTRATIPPKGSLKAIPIPLPHSIQADGD-------ACLFVKDADKKRIKEALASDPVAGLTKVMGIKKLKKHFGQFKDRRELKASFATFLADDRVLPYLKSLLGKPFFEAKKQPITVHVSGKNVSDPVRRALAG---------TAMFVSTGPCFNVKVAHDGLDTAAIVENILSGTEAVVSYVPKGWKNIKSISIKTNDSVALPIYNALP 236          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_009037332.1 (hypothetical protein AURANDRAFT_37654 [Aureococcus anophagefferens] >EGB07965.1 hypothetical protein AURANDRAFT_37654 [Aureococcus anophagefferens])

HSP 1 Score: 152.1 bits (383), Expect = 4.500e-33
Identity = 102/262 (38.93%), Postives = 145/262 (55.34%), Query Frame = 0
Query:   53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG---VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAV-EALPGKWKNVMAISLKTSASVALPLYQRLP 311
            S + A   +KAV+ALL        A  SK+G   DL A    D++ VQ+ L + P   SPKP  + LPHPL      D  E + CLIVK  DK  +K      +  G   V +V+   +LR+ Y++++++R+LRD FD+FL DDR+ P+LGK LG TFF +KK PI +K+     + P S+A    +I  A    H+    G C+A  +A T       +ANV+AG+   V + +P KW NV+++SLK   S ALPLY   P
Sbjct:    4 SPLVASDVTKAVKALL--------AYRSKQGRGLDLDA----DFLTVQIGLKQAPITPSPKPRLVALPHPL-----KDASELSCCLIVKAADKPWLKALAVDGEAPGPKLVDKVLAFDKLRSSYKQYKDKRELRDRFDVFLADDRVAPMLGKLLGSTFFGRKKQPIVVKV-----TRPESLAA---QIRKATASAHVVLKEGTCVAANLAHTDMSADECVANVVAGVNAVVGDLVPKKWNNVLSVSLKLPESAALPLYNADP 240          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: OUW42288.1 (hypothetical protein CBD41_09255 [bacterium TMED181])

HSP 1 Score: 151.8 bits (382), Expect = 5.900e-33
Identity = 96/275 (34.91%), Postives = 153/275 (55.64%), Query Frame = 0
Query:   53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEA-GDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEPQEA 324
            SR++  Q  KAV AL +H  K +A       GK  L   +  GD+  + V+  ++P++ S K VP+++PHPL    K +     +CLIVK+   +     K+ +A M++ GV++V+G+ +LR +Y+  + +R+L D++DLF  D R+LP+L K LGK+FF KKK PI + +           A   K+  AA   T+ +   G C+ +KV  +      V  N +A IE  V+ +P KW NV +I +KT+ SVALP++  LP    +K    ++A
Sbjct:    5 SRVNPAQVKKAVAALAKHLEKVKAE------GKVQLFEEDGDGDHYSILVSTRRVPQKGSNKLVPVKIPHPLLNPDKTE-----ICLIVKDHEGEGHKAAKKKVADMEVCGVAKVLGISKLRNNYKPHEAKRQLCDSYDLFCADARVLPILPKLLGKSFFKKKKQPIPVDL------TKKDWAAQIKKAAAA---TYAHMGAGTCIHLKVGTSGMEVGKVTENAIAAIENLVQHVPRKWSNVQSIYMKTNESVALPVFSALPDPEEEKAAREEDA 259          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: EJK66104.1 (hypothetical protein THAOC_12993 [Thalassiosira oceanica])

HSP 1 Score: 151.4 bits (381), Expect = 7.700e-33
Identity = 105/284 (36.97%), Postives = 153/284 (53.87%), Query Frame = 0
Query:   51 PPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPL--------HGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKME--GVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEPQEAV 325
            P   ++     +A++ALL+H   H+A        K  LL  E    V VQ  LA+IP R SPKP+ I +PH L         G  +D   E   C+IVKE+ K  V+  +A    E   + +V+GLQ LRT ++ F +RR+L   FD+F  DDRILP+L KALG  FF KKK PI +K+        +    +   I    + T +Y + G C+ +K   T+ P + +L N++A        +P KW NV +IS+KTS+SV+LP+Y++ PQ L +  I  +E V
Sbjct:    8 PTVGVEEALTDRALRALLKH---HEAT-----SSKDQLLGDELD--VQVQFGLARIP-RGSPKPIRIEIPHSLVKVDGDGQEGGNEDYIREVDACIIVKEESKPWVQELIARFPSELGCIKKVLGLQSLRTKHKSFTQRRELLARFDVFFADDRILPMLTKALGGKFFEKKKQPIPVKL--------TRKEALPFMIQKCLKSTFMYLSAGTCITVKAGNTAMPSSKLLDNIVAVCAEVPTKVPRKWANVGSISIKTSSSVSLPIYKKTPQELEQIRILAEEQV 272          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_005651651.1 (ribosomal protein L1 [Coccomyxa subellipsoidea C-169] >EIE27107.1 ribosomal protein L1 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32
Identity = 101/272 (37.13%), Postives = 148/272 (54.41%), Query Frame = 0
Query:   59 QASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERV-SPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEPQEAVMQ 327
            Q  KAV ALL+H  K QA        K + L  E     LV +AL K P+     KP+ + LPH L+     D +   VCLIVK+   +     K+ +   K+  VS+VVG+ +LRT Y   + +R L  A+DLFL D+R+LP L K LGKTFF KKK PI + + G             +++  A + T+++   G C+ I+VA++SF       N++  I+GA+  +P KW NV A+ +KT+ S ALP+YQ LP+   +  I  Q A ++
Sbjct:   11 QIRKAVAALLKHVEKQQA--------KANELLEEEELLYLVIIALKKTPQEARKDKPLRLPLPHSLY-----DFDGAEVCLIVKDHKGEGHKAAKQRVKEEKLAKVSKVVGVSKLRTKYESAEAKRALCTAYDLFLADERVLPSLPKLLGKTFFKKKKQPIPVDLTG---------KDWARQVRKATEATYMHHTGGTCINIRVARSSFSAEQCTENIVEAIKGALPHIPKKWNNVQALHVKTATSAALPIYQTLPEQPQRIEIPKQAAQVE 260          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_024383641.1 (ribosomal L1 domain-containing protein 1-like [Physcomitrella patens] >PNR49116.1 hypothetical protein PHYPA_011012 [Physcomitrella patens])

HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32
Identity = 104/268 (38.81%), Postives = 150/268 (55.97%), Query Frame = 0
Query:   54 RIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVK----RALAVMKMEG--VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316
            +++A+   +AV AL++  A      A K+  K  LL  +   YV+  V + K+P++    P  + LPHPL+      +  H VCLI+ + + AK K     A A ++ EG  +S+V+ L +L+TDY   + +RKL  ++D FL DDRIL  L K LGKTFF KKKHPI + +         + A    +I AA   T+LY + G C A+KVA+ S     ++ NV A IEG  + +P KW NV +  LKT  SV+LPLYQ LP   +K
Sbjct:   21 KVNAVLVERAVDALVKWCA------AQKQKEKAQLLEDDQLLYVV--VGMKKVPDKGRTNPYVLELPHPLY----QPDGNHEVCLIISDREHAKQKLDKQMAKARIEKEGLKISKVIPLSKLKTDYFAHEAKRKLCGSYDTFLADDRILGELPKLLGKTFFKKKKHPIPVNL---------TRAQWTGQISAALNSTYLYMSGGTCSAVKVARMSQARDEIVQNVNAVIEGIAQQIPKKWANVRSFFLKTLDSVSLPLYQSLPDMPLK 267          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_002508838.1 (predicted protein, partial [Micromonas commoda] >ACO70096.1 predicted protein, partial [Micromonas commoda])

HSP 1 Score: 149.8 bits (377), Expect = 2.200e-32
Identity = 91/262 (34.73%), Postives = 147/262 (56.11%), Query Frame = 0
Query:   53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEA-GDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLP 311
            SR++  Q  KAV AL +H  K +A       GK  L   +  GDY  V ++  ++P++ S K VP+++P+PL    K +     +CLIVK+   +   + K+ +A M+  GV++V+G+ +LR +Y+  + +R+L D++DLF  D R+LP+L K LGK+FF KKK P+ + +         +      +I  A   T+ +   G C+ +KV  +      V  N +A I+  V+ +P KW NV +I +KT+ SVALP+Y  LP
Sbjct:    1 SRVNPAQIKKAVAALAKHLEKVKAE------GKTQLFEEDGDGDYYSVMLSTRRVPQKGSNKLVPVKIPNPLLNPDKTE-----ICLIVKDHQGEGHKEAKKKVADMEACGVAKVLGISKLRNNYKPHEAKRQLCDSYDLFCADARVLPILPKLLGKSFFKKKKQPVPVDL---------TKKDWAAQIRKAAAATYAHMGAGTCIHVKVGTSGMEVTKVAENAIAAIDDLVQHVPRKWSNVQSIYMKTNESVALPVYNALP 242          
BLAST of NO11G02560 vs. NCBI_GenBank
Match: GAQ84363.1 (Ribosomal protein L1p/L10e family [Klebsormidium nitens])

HSP 1 Score: 149.4 bits (376), Expect = 2.900e-32
Identity = 100/266 (37.59%), Postives = 145/266 (54.51%), Query Frame = 0
Query:   53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316
            S +   Q +KAV ALL+         + KK  K  LL  +  D   + ++L K P+R    P  I +PH L+      +    VCL+VK+   + + + K  +AV    GVS+V+G+ +L+T Y+ ++ +R+L  ++DLF+ DDRIL +L K LGKTFF KKKHPI + + G               I  A   T+LY + G+C  ++VA+ S  P  V+ NV+A  EG  + LP KW N+ A+ LKTS S ALPLY  LP    K
Sbjct:   10 SELSKEQVTKAVTALLKW------VDSRKKQQKPQLLDDD--DMFHLVISLKKTPDREKTNPYRISIPHSLYPL----DAAREVCLLVKDVSGEGQKEAKHQIAVEAGTGVSKVIGVSKLKTKYKPYEAKRRLCGSYDLFVADDRILGVLPKLLGKTFFKKKKHPIPVTLKG---------KNWAGAIRKACDSTYLYVSGGSCSDVRVARISQEPQEVVENVVAAAEGISKILPKKWANIQALYLKTSESAALPLYNALPDTTAK 254          
The following BLAST results are available for this feature:
BLAST of NO11G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24932.12.600e-12181.07hypothetical protein Naga_100086g5 [Nannochloropsi... [more]
CBJ27277.15.700e-4442.52conserved unknown protein [Ectocarpus siliculosus][more]
OQR92582.19.100e-3436.58hypothetical protein ACHHYP_03487 [Achlya hypogyna... [more]
XP_009037332.14.500e-3338.93hypothetical protein AURANDRAFT_37654 [Aureococcus... [more]
OUW42288.15.900e-3334.91hypothetical protein CBD41_09255 [bacterium TMED18... [more]
EJK66104.17.700e-3336.97hypothetical protein THAOC_12993 [Thalassiosira oc... [more]
XP_005651651.11.000e-3237.13ribosomal protein L1 [Coccomyxa subellipsoidea C-1... [more]
XP_024383641.11.700e-3238.81ribosomal L1 domain-containing protein 1-like [Phy... [more]
XP_002508838.12.200e-3234.73predicted protein, partial [Micromonas commoda] >A... [more]
GAQ84363.12.900e-3237.59Ribosomal protein L1p/L10e family [Klebsormidium n... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL112nonsL112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR020ngnoR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001978NSK001978Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02560.1NO11G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556095gene_5152Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100086g5gene5560Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02560.1NO11G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02560 ID=NO11G02560|Name=NO11G02560|organism=Nannochloropsis oceanica|type=gene|length=3154bp
AGAGACCATGGCCGCCATCGGCAGCAACAAGCGGAAGAAGACCTCCCCAC
CCGCCACCACCCCCCCAGGCACTGTGACCACCAGCACCACCAGCAGTTAC
AAAAAGGTAGCCAAGGCTACATCTCCCCGTGCTGCCACATCCACTATCAC
CCCTCTTCCCCCCAGCCGTATCGATGCCTTGCAAGCCAGTAAGGCCGTGC
AAGCCCTTCTGCAACACTACGCCAAGCACCAAGCGGCCGTCGCGAGCAAG
AAGGGAGGCAAACAAGACCTGTTGGCATCCGAGGCAGGAGACTACGTTCT
GGTGCAAGTGGCATTAGCTAAGATACCCGAGCGAGTAAGCCCCAAGCCTG
TGCCTATTCGTTTGCCCCACCCTTTGCACGGCAGTGGGAAGGACGACGAG
GAGGAGCATGCGGTCTGTTTGATCGTCAAGGAGGACGACAAGGCCAAAGT
AAAAAGGGCGTTGGCAGTCATGAAGATGGAGGGGGTGAGCGAGGTGGTGG
GCTTACAGGAGCTCCGGACGGATTACAGAGAATTCCAGGAGCGGAGGAAG
CTAAGGGATGgtaagtgatcgaacggatattttgggtatgggaggttttg
atggtcacggggccttgtctgtcattttacccgtgcgaacagtgcacaca
cacatgagtacatttcttgttctgtttggatctttccctgtttttggtcc
atcctccctgaatcttaattcccatttcgaaaggcgaaaggctcccgctg
atgactagtacatgcaccacaccgaaccgcccctcggggcggcctgtgga
cacttgttactccataaatcaccaatttatcttgactgagggaaccacat
ctctatcaaaaaaaaaatctccctcttctcgtccgtccttccctcacagc
ctccatactctccctccactccccccccccccctcaaaacacagCCTTCG
ATCTCTTCCTCGTCGATGACCGCATCCTCCCCCTCCTGGGCAAGGCGCTG
GGTAAAACATTTTTCTCCAAGAAGAAGCATCCAATATCTCTTAAAATCGG
CGGCCTCCTCTCGAGCAATCCCTCCTCCATGGCCACCGTGGGCAAGCGTA
TCATCGCCGCGCAACAACGCACGCACCTCTACCGCAACCACGGGAACTGC
CTGGCAATCAAAGTCGCCAAGACCTCCTTCCCTCCCGCCTTCGTCCTCGC
AAATGTCCTTGCCGGAATAGAAGGAGCGGTGGAAGCCCTCCCTGGGAAAT
GGAAGAACGTTATGGCTATCTCTCTGAAGACAAGCGCGTCTGTCGCCCTC
CCTCTCTATCAGCGCCTCCCTCAGTACCTCGTTAAAAAGCCGATTGAACC
TCAGGAAGCAGTCATGCAGCATTTGAAAGAGAAGGAAGAAGAGAAGGAGA
ACGAAATGAAGAAAAGAATGAAGATGATGAAGGAGGGAGCTGCGGTGACG
GCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGGGGTAAGAA
GCGTGCTGGACAAGGGGACGTGGTAGTGAGGGCAGAGAAGCAGAACGAGG
GGAAAGATATCACAAAAGTATCTGCAGCGAAGAGCACTACCAGCAGCAAC
AAAAAGGCCAAAATGGCTGGAACGGCTAATACTGCTGCCGCAAAAGAGGA
GGCAACAGCAGCAGAAACAACCGCCGCACGCGCGGGCAAGAAGAAGAGGT
CTCGCGATGATGGTGCTTCAGCAGCAGAAGCCGCAACTGTGTCGGCACCA
GCAGCGGCAGTAAGTGGAAGCAGCTTAAAAAAGAATGCTGCCGGCACTGC
TGCAGGAGGCAATAAGAAGGGTGTTGTGGATGCTGCGGCCAAGAGGGGCA
AGCCACCCGCGGCGGAGAAAGGAGACGAGACGTCTCAGAAGCAGAAGAGG
GGAAAGGTCAAGGCTTGAATTGAAGTGCCAGAGTCTAAAGGAGAGATAAA
AACAAAATCGTGTCGCTTTCAAAGTGTGGTTTGGGGATGTGGCTTGTGAG
TGAGCCGCTCAGAGTTTCCATGCGTGTGTGCATGTGGTGTGTGAGAAGAC
ACAGAAGACTGTCTCTGATTTATTTAGCCTGCCGAAAACAAAATCATGGT
GAAAGAAAAAGGGCAAGAAATAGAAAAGAAATCAGAGGCCTACAGAAACA
GTTTCCAAATTTCCCCATCTGTTACGTTACTTCTCTTGCCTCATCAAGAG
ATGTCTTTTTCTTCGAATCCCGCTTCCTCCCCTCCCTCTTCGCTGCCCTC
CACCTTCCGCCTCTGCCTATGTACGTCCGTCCATTCATCCCCCCCTTCTC
ATCTAAAGCATGCGCACCCCATCCTTATCCACGACTTTCATGATCCACTT
GGGTTGAGAAATCAGAAATCGTACTGCCAACTCCTTCTTCGCCTTCTCCA
AAATTTCCTCCGCCTCCGCAAGCGTCAACCCCTCCTTGTACTCCCTATCA
AAGATCGACAGCGTAAAATTCGCTGCGTATCCCTGCGCGCCAAAGTTAAG
CTTCTGCATGCTGCCCAGGTAATCCATAAAGTACAGAGACGCCCCATCCT
TCTCATCGAACCCCCCCAGCAGCAAATTGGTTTGGTACGGACCCTTGCGC
AACGCCGTGGCCAGAGTGCGACGGATAAAGTTGGCCGCCGCATGGGTGCC
TAGCTTCAGATCGTTGTTAAACTCATACAATGCCATATTCTTCTGCACGT
ACTCGGTCAAATTGCTGCAGTCAGCGTTGGGTCCCGCCGCGGCGAGGAGC
TTATGGCTGTCCAACTGGGCTATTTTGTCTTGGTCCGTTTTGAAGACAAG
GATGGAACGGGCCGCCGAGGCGTCCGCAGCAATGAGAACGAATCCGTCGC
CTTTTATGCCCAGAAGTGTGTCCATGGTAAAGGCCTCTATGTGTCGTGGC
GTTGCCTGTGGGTATTGGGGAAGGTGGATGGGTTGTTGATGATGATGCTG
GCTGGGACGGAGCGTGAGGGAGGCGCCAGACGAGGCAACAGCGGTAACCG
ACGACGGGGCGTCGTAGAATACAGCGCACGACTTACATATGTGCCTGTAT
GTATACTCTGCTGGGTGAGTCCGAATGTTTATGTGAGTGCAAGTATGCAC
ATATACACAGCGTGCGTCTCGGACGAAGACGAAGAAGCGAGGAGCTCATC
GCCG
back to top

protein sequence of NO11G02560.1

>NO11G02560.1-protein ID=NO11G02560.1-protein|Name=NO11G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bp
MAAIGSNKRKKTSPPATTPPGTVTTSTTSSYKKVAKATSPRAATSTITPL
PPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQ
VALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKR
ALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLG
KALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNH
GNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSAS
VALPLYQRLPQYLVKKPIEPQEAVMQHLKEKEEEKENEMKKRMKMMKEGA
AVTAAAAAAGGGGGGGGGKKRAGQGDVVVRAEKQNEGKDITKVSAAKSTT
SSNKKAKMAGTANTAAAKEEATAAETTAARAGKKKRSRDDGASAAEAATV
SAPAAAVSGSSLKKNAAGTAAGGNKKGVVDAAAKRGKPPAAEKGDETSQK
QKRGKVKA*
back to top
Synonyms
Publications