NO11G02480, NO11G02480 (gene) Nannochloropsis oceanica

Overview
NameNO11G02480
Unique NameNO11G02480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3410
Alignment locationchr11:788456..791865 +

Link to JBrowse

Properties
Property NameValue
DescriptionFatty acid desaturase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:788456..791865 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR005804Fatty_acid_desaturase-1
IPR021863DUF3474
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO11G02480 vs. NCBI_GenBank
Match: AQX92134.1 (delta-12 fatty acid desaturase [Nannochloropsis oceanica])

HSP 1 Score: 913.3 bits (2359), Expect = 3.100e-262
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
Query:   37 MGRGGEKTVTPLRKKTLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQRA 475
            MGRGGEKTVTPLRKKTLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQRA
Sbjct:    1 MGRGGEKTVTPLRKKTLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQRA 438          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: EWM24911.1 (fatty acid desaturase [Nannochloropsis gaditana])

HSP 1 Score: 795.0 bits (2052), Expect = 1.200e-226
Identity = 377/461 (81.78%), Postives = 407/461 (88.29%), Query Frame = 0
Query:   27 DSLPTHPSQTMGRGGEKTVTPLRKK-------------TLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQRA 475
            D     P   MGRGGEKTVTP  K              +  DAASTIS +VRPSK++EA+PTEELRKKA QYG + S DR +LL+ LAPYGDILLR DAP SLPLAPPPFTL+DIK AVPRHCFERSL+TS FHL  DL+ VA+LGYLA+L+GH DVP MSRY+LWPLYWYAQGSVLTGVWVIAHECGHQSFSPYE VNN  GW+LHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKE+LMDEILLHSPLANL QIIIMLT+GWMPGYLL+NATGPRKYKG +NSHF+PNSALFSPKDRLDIIWSDIGFF+ALA VV+AC Q+GF TVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRG+EW+WFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHI+KALG YYLKDDTPIWKALWRSYTLCKYVD+++  VFYK RA
Sbjct:   24 DRFSNSPFSRMGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRA 484          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: XP_005855248.1 (omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526] >EKU21105.1 omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 790.8 bits (2041), Expect = 2.300e-225
Identity = 374/451 (82.93%), Postives = 404/451 (89.58%), Query Frame = 0
Query:   37 MGRGGEKTVTPLRKK-------------TLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQRA 475
            MGRGGEKTVTP  K              +  DAASTIS +VRPSK++EA+PTEELRKKA QYG + S DR +LL+ LAPYGDILLR DAP SLPL PPPFTL+DIK AVPRHCFERSL+TS FHL  DL+ VA+LGYLA+L+GH DVP MSRY+LWPLYWYAQGSVLTGVWVIAHECGHQSFSPYE VNN  GW+LHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKE+LMDEILLHSPLANL QIIIMLT+GWMPGYLL+NATGPRKYKG +NSHF+PNSALFSPKDRLDIIWSDIGFF+ALA VV+AC Q+GF TVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRG+EW+WFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHI+KALG YYLKDDTPIWKALWRSYTLCKYVD+++  VFYK RA
Sbjct:    1 MGRGGEKTVTPPSKTFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLTPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRA 451          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: XP_005854300.1 (omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526] >EKU22061.1 omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 588.2 bits (1515), Expect = 2.300e-164
Identity = 267/293 (91.13%), Postives = 281/293 (95.90%), Query Frame = 0
Query:  173 MSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEE 466
            MSRY+LWPLYWYAQGSVLTGVWVIAHECGHQSFSPYE VNN  GW+LHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKE+LMDEILLHSPLANL QIIIMLT+GWMPGYLL+NATGPRKYKG +NSHF+PNSALFSPKDRLDIIWSDIGFF+ALA VV+AC Q+GF TVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRG+EW+WFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHI+KALG YYLKDDTPIWKALWRSYTLCK  + EE
Sbjct:    1 MSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKTAEEEE 293          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: CBJ49159.1 (Fatty acid desaturase [Ectocarpus siliculosus])

HSP 1 Score: 527.3 bits (1357), Expect = 4.800e-146
Identity = 257/447 (57.49%), Postives = 317/447 (70.92%), Query Frame = 0
Query:   37 MGRGGEK--TVTPLRKKTLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYG-DILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIK---------EELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYK 472
            MGRGG         R   ++ A   + G+V          TEEL++ A + G+ TS  RE LL  L P+   I  R  APK LPLA PPF  SD++ AVPRHCF+R+L+TS  HL  DLI VA  GYLA+ +    +P  + ++LWP YW+ QG+ +TGVWV+AHECGHQSFS  +++NN  G + HSALLVPYHSWRI+H KHHNNTGSC NDEVF PP++         EE M E++  +PL  +  II ML +GWMPGYL  NATGP KY GL+ SHFNP + +F  +DR+DI+ SD+GFFVA+A + YA    GF TV K+YL+PYMV N +LVLITYLQHTDVF+PHFRGSEW WFRGALCTVDR+FG ++DH  HHI+DTHVCHH+FSKMPFYHAQEA+EHIR  LGDY+L D TPI KALWRS+T C +V+    TVFY+
Sbjct:    1 MGRGGRSAHAFAAGRDDRIVRAQHILEGSVLADN-----KTEELKQFAEERGLKTSGKREDLLIALHPFSKGIAHRYPAPKPLPLARPPFKFSDVQKAVPRHCFKRNLATSATHLASDLIMVATFGYLATFISGGAIPAWAGWLLWPTYWFVQGTQMTGVWVLAHECGHQSFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCTNDEVFCPPVRTDNGKSPTAEEDMAELVHEAPLVQMFWIIFMLVLGWMPGYLCFNATGPSKYNGLAKSHFNPWAKMFEERDRMDIVTSDLGFFVAVAGICYAVHALGFLTVAKFYLVPYMVTNAYLVLITYLQHTDVFMPHFRGSEWDWFRGALCTVDRTFGPVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGDYHLSDTTPIPKALWRSFTCCTHVEDVGHTVFYQ 442          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: BAK52809.1 (delta12-fatty acid desaturase [Pinguiochrysis pyriformis])

HSP 1 Score: 466.1 bits (1198), Expect = 1.300e-127
Identity = 230/439 (52.39%), Postives = 298/439 (67.88%), Query Frame = 0
Query:   37 MGRGGEKTVTPLRKKTLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLA-PPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMD---EILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYK 472
            MGRGG  + T  +       +   + T R  K +E L   ELRK A   G+  + DRE LL  LAP+   +L      ++PL  P PFT  DIK A+PRHCF+RS   S  HL++DL  VA + Y AS +  S++    +++ W  YW+ QG+V TGVWVIAHECGHQ+FSP + +N+  GW+LHSALLVPYHSWRISH  HH+NTGSCENDEVF P  +++ ++   E++   PL ++ +I +MLT GWMPGYL +NATGP KY+G +  HFNP SALF+ +D  DI+ SD GF +ALA +VYA   FG   V KYY +PYM VN+ LVLITYLQHTDV +PH+RG EW W RGA CT+DRSF  +L+H FHHI+DTHV       MPFYHA+EA++HI+K LGDYY+ DDT    A +R+ + C++VD+E   VFYK
Sbjct:    1 MGRGGNLSSTAAKA-----VSKRTAETERSMKRMEHLSDAELRKAATLRGLADAGDREELLETLAPFAAGVLDKRTQHTMPLKWPAPFTFGDIKKAIPRHCFQRSAVKSFMHLSVDLAMVAAMAYGASFIDGSELAGWQKFLAWSTYWFWQGAVGTGVWVIAHECGHQAFSPSKFINDSVGWVLHSALLVPYHSWRISHRNHHSNTGSCENDEVFCPARRDDYVEPHGELMRDVPLYSVWRIFLMLTFGWMPGYLFMNATGPHKYEGKTRDHFNPKSALFAKEDYFDIVSSDCGFLLALAGLVYAGYTFGPMAVLKYYWMPYMWVNHWLVLITYLQHTDVNVPHYRGEEWNWLRGACCTIDRSFTPVLNHLFHHITDTHVXXXXXXTMPFYHAEEATKHIKKVLGDYYMHDDTFFPLAAYRAMSECRFVDNEGPVVFYK 434          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: XP_009533768.1 (hypothetical protein PHYSODRAFT_264618 [Phytophthora sojae] >EGZ11023.1 hypothetical protein PHYSODRAFT_264618 [Phytophthora sojae])

HSP 1 Score: 442.2 bits (1136), Expect = 2.000e-120
Identity = 220/395 (55.70%), Postives = 273/395 (69.11%), Query Frame = 0
Query:   83 AQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEEL---MDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQ-FGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQR 474
            A    N + D E   R+LA  G   +   AP  LPL  P F+L D++ A+P+HCFERS  TS +++  +++  A L Y A+ +   D    + Y+LWP+YW+ QGS LTGVWVIAHECGHQ++   E VNN  G +LHSALLVPYHSWRISH KHH+NTGSCENDEVF P  +  L    +E L  SPL  L +I+ ML +GWMPGYL  NATGP KY G S SHFNP SA+++ ++R  I+ SDI F VA+  V+ A V  F F T+ K+Y++PY +VN +LVLITYLQHTD +IPHFR  EW W RGALCTVDRSFG  LD   H I DTHVCHHIFSKMPFYH +EA+  I+  LG +YLKD TP+  ALWRSYT CK+V+ +   VFYK +
Sbjct:    8 ADSAANLATDSEAKQRQLAEAGYTHVEG-APAPLPLELPHFSLRDLRAAIPKHCFERSFVTSTYYMIKNVLTCAALFYAATFI---DRAGAAAYVLWPVYWFFQGSYLTGVWVIAHECGHQAYCSSEVVNNLIGLVLHSALLVPYHSWRISHRKHHSNTGSCENDEVFVPVTRSVLASSWNETLEDSPLYQLYRIVYMLVVGWMPGYLFFNATGPTKYWGKSRSHFNPYSAIYADRERWMIVLSDI-FLVAMLAVLAALVHTFSFNTMVKFYVVPYFIVNAYLVLITYLQHTDTYIPHFREGEWNWLRGALCTVDRSFGPFLDSVVHRIVDTHVCHHIFSKMPFYHCEEATNAIKPLLGKFYLKDTTPVPVALWRSYTHCKFVEDDGKVVFYKNK 397          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: XP_012196163.1 (hypothetical protein SPRG_02224 [Saprolegnia parasitica CBS 223.65] >KDO33417.1 hypothetical protein SPRG_02224 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 441.8 bits (1135), Expect = 2.700e-120
Identity = 207/365 (56.71%), Postives = 258/365 (70.68%), Query Frame = 0
Query:  113 PKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAP---PIKEELMDEILL-HSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQR 474
            P+ LPL PP  TL D++ A+P HCFERS +TS +HL  +L   A +  +   L  +D+P  ++ + WP+YW+ QG+  TG+WVIAHECGHQ+FS  E +N+  G +LHS L VPYHSW+I+H +HH+NTGSCENDEVF P    + E   D  LL  SPL NL  I++ML +GWMPGYL  NATGP KY GL+ SHFNP +A F PK+RL I WSD+ F  AL    Y    FG   V ++YL+PY++ N +LVLITYLQHTD ++PHFRG EW W RGALCTVDRSFG  +D   HHI+DTHV HHIFSKMPFYHA EA++ I   LG YYL D TPI  ALWRS+T CKYV+ +   VFYK++
Sbjct:   25 PEPLPLEPPTITLKDLRAAIPAHCFERSAATSFYHLAKNLAICAGVFVVGLQLAATDLPLAAKLVAWPIYWFVQGTYFTGIWVIAHECGHQAFSASEVLNDTVGIILHSLLFVPYHSWKITHRRHHSNTGSCENDEVFTPTPRSVVEAKHDHSLLEESPLYNLYGIVMMLLVGWMPGYLFFNATGPTKYAGLAKSHFNPYAAFFLPKERLSIWWSDLCFVAALGLFGYGVSVFGILDVARHYLVPYLICNAYLVLITYLQHTDTYVPHFRGDEWNWLRGALCTVDRSFGAWIDGAIHHIADTHVTHHIFSKMPFYHAMEATQAITPLLGKYYLIDPTPIPIALWRSFTHCKYVEDDGNVVFYKRK 389          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: OQS02342.1 (fatty acid desaturase [Thraustotheca clavata])

HSP 1 Score: 439.5 bits (1129), Expect = 1.300e-119
Identity = 206/366 (56.28%), Postives = 254/366 (69.40%), Query Frame = 0
Query:  112 APKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELM----DEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQR 474
            AP+ LPL PP  TL DI+ A+P HCFERS  TS +++  ++   A L Y      + D+P   + I WP+YW+ QG+  TG+WVIAHECGHQ+FS  E +N+  G +LHS L VPYHSW+I+H +HH+NTGSCENDEVF P  + ++       +   SPL NL  I +ML +GWMPGYL  NATGP KY G S SHFNP +A F PK+RL I WSDI F  AL    Y    +G   +  +Y++PY++ N +LVLITYLQHTD F+PHFRG EW W RGALCTVDRSFG  +D   HHISDTHV HHIFSKMPFYHA EA+E I+  LG YYL D TPI  ALWRSYT CKYV+ + + VFYK++
Sbjct:   24 APEPLPLDPPTITLKDIRAAIPAHCFERSALTSSYYMVKNIAICAALFYAGLTFANMDLPIWVKIIGWPVYWFVQGTYFTGIWVIAHECGHQAFSDSEYLNDTVGIILHSLLFVPYHSWKITHRRHHSNTGSCENDEVFTPSTRSKVEAAPDHSLWEESPLYNLYGIFMMLLVGWMPGYLFFNATGPSKYVGKSKSHFNPYAAFFLPKERLSIWWSDICFVAALVLFGYGVSIYGIVNIALHYIVPYLICNAYLVLITYLQHTDTFVPHFRGEEWNWLRGALCTVDRSFGAWIDSAIHHISDTHVTHHIFSKMPFYHAAEATEAIKPLLGKYYLIDSTPIPMALWRSYTHCKYVEDDGSVVFYKRK 389          
BLAST of NO11G02480 vs. NCBI_GenBank
Match: XP_008615214.1 (hypothetical protein SDRG_10975 [Saprolegnia diclina VS20] >EQC31373.1 hypothetical protein SDRG_10975 [Saprolegnia diclina VS20])

HSP 1 Score: 439.1 bits (1128), Expect = 1.700e-119
Identity = 206/365 (56.44%), Postives = 258/365 (70.68%), Query Frame = 0
Query:  113 PKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAP---PIKEELMDEILL-HSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQR 474
            P+ LPL PP  TL D++ A+P HCFERS +TS +HL  +L   A +  +   L  +D+P  ++ + WP+YW+ QG+  TG+WVIAHECGHQ+FS  E +N+  G +LHS L VPYHSW+I+H +HH+NTGSCENDEVF P    + E   D  LL  SPL NL  I++ML +GWMPGYL  NATGP KY GL+ SHFNP +A F PK+RL I WSD+ F  AL    Y    FG   V ++Y++PY++ N +LVLITYLQHTD ++PHFRG EW W RGALCTVDRSFG  +D   HHI+DTHV HHIFSKMPFYHA EA++ I   LG YYL D TPI  ALWRS+T CKYV+ +   VFYK++
Sbjct:   25 PEPLPLEPPTITLKDLRAAIPAHCFERSAATSFYHLAKNLAICAGVFAVGLKLAAADLPLAAKLVAWPIYWFVQGTYFTGIWVIAHECGHQAFSASEILNDTVGIILHSLLFVPYHSWKITHRRHHSNTGSCENDEVFTPTPRSVVEAKHDHSLLEESPLYNLYGIVMMLLVGWMPGYLFFNATGPTKYAGLAKSHFNPYAAFFLPKERLSIWWSDLCFLAALYGFGYGVSVFGLLDVARHYIVPYLICNAYLVLITYLQHTDTYVPHFRGDEWNWLRGALCTVDRSFGAWIDSAIHHIADTHVTHHIFSKMPFYHAIEATDAITPLLGKYYLIDPTPIPLALWRSFTHCKYVEDDGNVVFYKRK 389          
The following BLAST results are available for this feature:
BLAST of NO11G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
AQX92134.13.100e-262100.00delta-12 fatty acid desaturase [Nannochloropsis oc... [more]
EWM24911.11.200e-22681.78fatty acid desaturase [Nannochloropsis gaditana][more]
XP_005855248.12.300e-22582.93omega-6 fatty acid desaturase delta-12 [Nannochlor... [more]
XP_005854300.12.300e-16491.13omega-6 fatty acid desaturase delta-12 [Nannochlor... [more]
CBJ49159.14.800e-14657.49Fatty acid desaturase [Ectocarpus siliculosus][more]
BAK52809.11.300e-12752.39delta12-fatty acid desaturase [Pinguiochrysis pyri... [more]
XP_009533768.12.000e-12055.70hypothetical protein PHYSODRAFT_264618 [Phytophtho... [more]
XP_012196163.12.700e-12056.71hypothetical protein SPRG_02224 [Saprolegnia paras... [more]
OQS02342.11.300e-11956.28fatty acid desaturase [Thraustotheca clavata][more]
XP_008615214.11.700e-11956.44hypothetical protein SDRG_10975 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL112nonsL112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR020ngnoR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001972NSK001972Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02480.1NO11G02480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591536gene_5146Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100092g4gene5569Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02480.1NO11G02480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02480 ID=NO11G02480|Name=NO11G02480|organism=Nannochloropsis oceanica|type=gene|length=3410bp
CCTTGCCGTCTCGTGTTGCTGGCTTCGCCCGACGTGCGGAAAGATTACAC
GCTCCGCTCTTTCAAGTACAGATACACGTTACATGATTGACAGGAGCCAG
TGTGGATGAAGAAGAGCCAGAGTTATTCCCCCCTGGATGGGTATTTGGAT
AGATGGATCATCCATCAGTGCCATCAGCTCTCTCACTCACCTCCACTCTC
ACACGCCACGTACCCGTGCTTGGTTGCTATATAGATTGCTAGGTTGCACA
CGGCACCGGTGCCTGGGCTGGTATACTTGCTCGATCCGCTGGTGCCCGCG
GCCTCCTCAATGCCCCCTCCAAAAAGCTGGCATTCGTTAGCACACAGATC
TTCCGGCACCATGTGAACAAATGATGCTTATGGAATGAAAAGCAATTTGT
CGTTTCTGAATGCGAAAGCCAACCAATAGGTGCTTAGGTGCTCGCGTCGA
TCGTGTAAATGATGTGGCGCATGATGGAGCATGACACGCTTTCATCGCAT
CGCAAAATATCATTTTTGTCCAGGACTTGTGTCATACATAAAAGAGCTTG
AATCGACGATCGGAAAAAGCGACAGCTGGCGGTGCCAGCAAGGCAACTGG
CGTGTGATGATGCGCCTGCCGTTGGAAAGGGAAAGGCGAAGCGCAGCCGT
CCAATCCATGTCCAATAGACACGACCACAGTGGAAAGCCTCTCTCTTAGA
CCGTCACAATACTTTTGGCCAAGGCTTCGGCAGTTCAACTGCCAAGCAGG
CAAAAGTCAAGGGCAACCACATGATGCTGGGAGGAATGTTAGCAGGAACC
CGGAGCTTGTGTCGTTGTTCTTCCTCGTCAGCCGGGATTGCTCGCCAGCG
CGACCACACCAGCCCCCCACTTCTTCTTGTTGTGACTTGCGCAAGCATTT
AACCTCTTATCGCGCACTGTAATTTGCCGGCCACGCCTGTGGCGTTCACA
ACCCCATCCTGCTGCTGACGGGGATTTGATGCCTACCAGGGTCTGAACGC
CCGCTTATTAGAGAAGCCACGTAAGCATACCATCACAGATCGCCTTCTTG
CCGCGGCATGTCCCAATCAAATGAAGTCAGATGGATTGGTTCCTCATGCC
CACCGACAGCTCAGCCTCTCATACGCCCTCTACACTCCTCACATCACAGA
CTCCCTTCCCACCCATCCGAGCCAAACCATGGGACGCGGCGGTGAGAAGA
CGGTGACCCCTCTTCGCAAAAAAACCCTCCTGGATGCCGCTTCCACGATC
AGCGGCACAGTCAGACCAAGCAAGGCAGTAGAGGCCCTGCCCACGGAGGA
GCTGCGTAAGAAGGCCGCACAATACGGTATCAACACTTCGGTCGACCGCG
AAACACTGCTGAGGGAGCTGgtaagtgcttgtgatcgcttgaggggtgga
tgggtaaaaacagttccctcccattcgtgcatgtggtcagacggatataa
gaattacgtgccatgcccttgacattttgatgtcaccgcgctgtcttcac
ttcccgctccaatagctattatgtacgtggactggcggctgctgcccctt
gtccttttttcttccctcccttgcatgccacctaagcatacctcgctcat
tcactttccgcatgtcatcataaccacagGCTCCCTACGGCGATATCCTC
CTCCGCAATGACGCCCCTAAATCCCTGCCCCTTGCCCCTCCTCCTTTCAC
CCTCTCCGACATCAAGAACGCTGTTCCCCGTCACTGCTTTGAGCGTTCCC
TCTCCACCTCCCTCTTCCACTTGACCATCGACTTGATCCAAGTCGCTGTC
CTCGGGTACCTTGCCTCATTACTGGGCCACTCCGACGTCCCGCCCATGTC
TCGTTATATTCTATGGCCGTTGTACTGGTACGCGCAAGGCTCTGTGCTGA
CGGGAGTGTGGGTCATTGCCCACGAGTGCGGGCACCAATCGTTTTCGCCT
TACGAGAGCGTGAACAACTTCTTTGGGTGGCTCTTGCACTCGGCCTTGCT
TGTGCCCTATCACTCTTGGAGGATTTCCCATGGAAAGCACCACAACAACA
CGGGGAGCTGCGAGAATGACGAGGTCTTTGCGCCGCCTATTAAGGAGGAA
CTGATGGACGAGATTTTGCTTCACTCCCCTTTGGCGAATCTGGTGCAGAT
AATCATAATGTTGACCATCGGATGGATGCCGGGGTACCTGCTCCTGAACG
CTACGGGGCCTAGGAAATACAAGGGACTGAGCAATAGCCACTTTAACCCA
AATTCGGCGTTGTTTTCTCCGAAGGACCGTCTGGACATTATTTGGTCCGA
CATTGGGTTTTTCGTGGCCTTGGCCTGCGTGGTATATGCCTGTGTGCAGT
TTGGATTTCAAACGGTGGGAAAGTATTACCTGCTGCCGTACATGGTGGTC
AATTATCACCTGGTCCTCATCACGTACCTGCAGCACACGGACGTCTTCAT
CCCCCACTTTCGGGGGAGCGAGTGGACGTGGTTTAGGGGCGCCCTTTGCA
CGGTCGACCGATCCTTCGGCTGGCTTTTGGACCATACGTTTCACCATATC
AGTGACACTCATGTGTGCCACCACATCTTCAGCAAGATGCCGTTCTACCA
CGCGCAGGAGGCGAGTGAGCACATTCGCAAGGCGTTGGGCGACTATTATT
TGAAGGATGATACCCCGATTTGGAAGGCATTGTGGCGAAGTTATACCCTG
TGCAAGTACGTGGACTCGGAGGAGACGACGGTATTCTACAAGCAGCGGGC
ATAGGGACCGGGGAATGGGTGAAGAGCGAGGCAGGTCAGTTTTTTATTGA
TGAGGATGACAGTGACGCGACTGTTATGTGGATGTGTGGTTGAGCGTGTT
GACGCGACGAAGGAAGGGGACGAGCGTGTAGTTTTATTTTCATGTATGCA
GAGCCGGAGAAAGGAGTGAAGAGGTGGAGGAGAGGTAGACTTGAACAGAT
GAGGTGATGAGGCGGCATGTTACATTCGAGTCTGCTTTGCGCGTGTGAGT
GCCTGTGTTGGTGTTTGTTGGCATTGGCGTGGATTTTGGTGTCGTCGACC
TCCTCAATCTTTGACTATTTCTCGCGCACAACTGGACGATGAGGGCTGAG
GCGAGTGTTGCGGATTGAGGGAGAGAGCAATAGCACAAATAAAATACCCT
TTTGAACGGTAGCTACTGACATGAGGAGAAGGAGAGAAGAAAAAAATCAT
CCACAACAAGAGAGGATACCCTTTTTAATAGCATGAGTGCTTGTAGTAGA
AGTAGATAATAATAGAAAAAGGATCGATCGAAGAAGAGCGGAAGAGCGCG
TCTTCCACTCGTCCCTTTTTTGGGGGGTGAGGGGAGGTTTATTACGCCAG
CACAACAACAAGTCAACCAGAGGGAAAGGAATAAAAACAAGAAATTTACA
TACTTGACGA
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protein sequence of NO11G02480.1

>NO11G02480.1-protein ID=NO11G02480.1-protein|Name=NO11G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bp
MKSDGLVPHAHRQLSLSYALYTPHITDSLPTHPSQTMGRGGEKTVTPLRK
KTLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLREL
APYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTI
DLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHEC
GHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVF
APPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGL
SNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYY
LLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLL
DHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKA
LWRSYTLCKYVDSEETTVFYKQRA*
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Synonyms
Publications