NO11G02340, NO11G02340 (gene) Nannochloropsis oceanica

Overview
NameNO11G02340
Unique NameNO11G02340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2499
Alignment locationchr11:747333..749831 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:747333..749831 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002020NSK002020Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02340.1NO11G02340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02340.1NO11G02340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02340 ID=NO11G02340|Name=NO11G02340|organism=Nannochloropsis oceanica|type=gene|length=2499bp
CTCGATTACTCGGATGACCTCCGGCGGCGTTCCCTTCAAATCGCCTCAGC
ATTTTCTCCTGGCTTTCAAACCCCCACACCAATATCCAACCCCTTACGTT
CGACAGCACCTTCTTCACCTTTAATACCATATTTCAAGACCATGGCATCG
GACGCCGGAGGCTGGTATTCCTTCTTGCTGGGCGACGACGTAGTGAATAC
CCCCCCACAGCACGACGACAGCAAAGCCCTCCTTCTGCCTCGCGTGAATT
ACGCCAATAACGCAGAGGACAGCCTTGAGCCTATAAGCGACTGGCTTACG
GGGCAGTCTGCACAATCCTCGCCGATGACCTTGACGCCGCCTGCATTCCG
GTCATCATCACCCTCCCTCCTCATCACGTCCCCCCTCCCCATCACCTCAA
CTACCACGGCATCTGCCACCGCCTTCTTTCTGAGCCCTCCTCGCTTCACG
ATGTGTCTTTCACCGCTTCAACTATCATCAGCTACCTCCTCTCCTTGGGC
CTCGTTCCTTTGTATCTGCAGGAGCAGCAGCCAGAACAAGGAGGAACAGA
GCAGCCCCGGCAACTACACCCTCCCCAGTCTTCTCTCACCTCCTCGCGAC
GGCCGTGCCACGATATTGTTGCGACCTCCACCAACACAACAGAAGCAAGG
ATCGATGTGGTGTGGCCAGAACGACGAAGACGAGGAGGAGGAGGACGAGG
AAGGGGAAGGGGAGGAGAAGGTGGGAGAGGAGGAGAATAGTGGTGGGGTG
CGGATGCGCAAGAGTACGAGGGCCCGCAAAGCCACTGTGAAGAAAACAGC
ATTAGCAAAGCGACTGTTCGATGGAGAATATGTCGAGGACGAGGATAAGA
GCGATGGAAGGGAATGGGAGGGAGGGAGGGAGGGAGGGGCGGTGATGTTA
CTATCCTCCTCCTCTCCTTCTTCCTCCTTCTCCTCTGCCTCTTCCTCGTT
TGCCTTCCACAGCAGCCAGCCGAGAACGATTTCCGCCGTCACCACCCATC
GTTCCCTCAGCAACAACAGCACCACAAGAAATGGTATTCTTCCTATCTCC
TCTGCAACCAAAGCCTTGTGCTTCGGTTCGGCGTCCCTCCCTGCTGCTAA
GAGCATTCTACTCGACAAAGTCCTGCGTGGGTGTATCACCAACTTCATCG
TGGGCCCTCGCCCTCCCCGCAAATGGATGGAGAGGGTGGCCACCCGGATA
GGGGTAACGTTGAAACAAgtaaggatgcgaacgaagccctcctgctgtcc
ttcgcctgttcctcctcgtttccccttctcctcttcctgtctcttctcct
tctcctcctcctctcgctcgctcatagcatcaagccttcaccttctctcc
ctccctccctccctccctccttccctcagGTGGACAGCAAATGCAGCAAT
ATCCGGCAACGCAGCCTGGACCGCCGCGGCCGCCCCCTCCCCCTCGCGCG
TGATACCTCCTCCCTCGTCGATGAGGCCATGGCGGCAGCATTGGTGGCCG
AAATGAGAGCCGAGCTCCGGGGCCTTACCGAGCAGGAGACGACGGATCAA
TTTTTGGCGTCCGATGGTAGTGGTGGTGGTGGATTCGGTGGTGCTGCTGC
TGGTGTTGGTGGTGATGGTAATTTGGAGAGGGAGGGAGCGGCGTCTCCTA
TTCACCTGACGCGGAGCAGCGGAGGGAAAGGGGGGAGGAAGGGAGGTAGT
GCATGTACAACCGTGGCAGCTTCTTCGACGACCCGACGATCGCAGGGAGG
GAGGGAGAGAGGGAGGGAGGAAGAGAAGGAGGGAATGACACCTTTGCGTT
CGATTGGGTGGGATTTGATCGGAGCAGGAGGGAGGGAGGGAGGGAAGGCG
ACCCTGACGTCAGCAACGCCGACGATGGTAGGAAATCGCGTGGGTACGAG
AAACAAAACTTCTATCTACGGTAGCAGCAGCAGCAGCAGTAGTAGCAGTG
CCATCAGCACAACGACGATGATTGACGCAAACAACAAGAGGAAACGCAAG
CCACCCCTCCTTACCTCCTCTCCCTCTACAGCTGCAGCCACAGCAGCGGC
GATCAAGGCAGGTAGGGAGGGAGGGCAGTGGTCAGTGCCAACGCCAGCAC
AACTGCGGCAGGTAGCGGAGGAGACGGGCTTGGGGCTGCAAGAGGTGTTG
ACTGTGTGGAAAAAGCTCCAGGGCGTCATCAGAGGGTCGTTGTGAGGGAG
GGAGAAAAAGAGGAAAAGAGTGTGTGTGGAAAAGAGGGAGGGGAGAGGAG
CAAGAGAGGGGAGGTGAAAGAGATAGAGAGGGAATAAAAAAGGCAAAGAG
GGAGAGAGAAAAGGGATGAAACAAAACAAAGAGAGAGGGAATGTGGGTAG
GCACACACACGACTCTCAACGTGCTTGAGAGGCAATCTTCAAGAGTGACA
ATAGATAGCTGAAAAGCGTCGTGGAAGATATAGCTTAAGTGACGAGCAAA
GACACAGACGCACAGAAAAGATGGGAAAGGAACGACAGGAAAGATAGGT
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protein sequence of NO11G02340.1

>NO11G02340.1-protein ID=NO11G02340.1-protein|Name=NO11G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MASDAGGWYSFLLGDDVVNTPPQHDDSKALLLPRVNYANNAEDSLEPISD
WLTGQSAQSSPMTLTPPAFRSSSPSLLITSPLPITSTTTASATAFFLSPP
RFTMCLSPLQLSSATSSPWASFLCICRSSSQNKEEQSSPGNYTLPSLLSP
PRDGRATILLRPPPTQQKQGSMWCGQNDEDEEEEDEEGEGEEKVGEEENS
GGVRMRKSTRARKATVKKTALAKRLFDGEYVEDEDKSDGREWEGGREGGA
VMLLSSSSPSSSFSSASSSFAFHSSQPRTISAVTTHRSLSNNSTTRNGIL
PISSATKALCFGSASLPAAKSILLDKVLRGCITNFIVGPRPPRKWMERVA
TRIGVTLKQVDSKCSNIRQRSLDRRGRPLPLARDTSSLVDEAMAAALVAE
MRAELRGLTEQETTDQFLASDGSGGGGFGGAAAGVGGDGNLEREGAASPI
HLTRSSGGKGGRKGGSACTTVAASSTTRRSQGGRERGREEEKEGMTPLRS
IGWDLIGAGGREGGKATLTSATPTMVGNRVGTRNKTSIYGSSSSSSSSSA
ISTTTMIDANNKRKRKPPLLTSSPSTAAATAAAIKAGREGGQWSVPTPAQ
LRQVAEETGLGLQEVLTVWKKLQGVIRGSL*
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Synonyms
Publications