NO11G02210, NO11G02210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02210 vs. NCBI_GenBank
Match: EWM24978.1 (eukaryotic translation initiation factor iso4e [Nannochloropsis gaditana]) HSP 1 Score: 313.9 bits (803), Expect = 3.900e-82 Identity = 150/173 (86.71%), Postives = 157/173 (90.75%), Query Frame = 0 Query: 33 EGGAGKHKLQNRWSFFYNNPKANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEENPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFKPNQKVGE 206 +G KH LQNRWSFFYNNPKANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRL +QADYYLFK+GVRPSYEENP GGVW FNLEK NKK+LEE WL+LVLG+IGETMED NDILGAVVSIKRGQDRLSLWTKTAADKELQV+IA RVK SLDLP T LEFKPNQKV E Sbjct: 89 DGETDKHVLQNRWSFFYNNPKANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLSIQADYYLFKEGVRPSYEENPEGGVWMFNLEKGNKKRLEEVWLYLVLGLIGETMEDSNDILGAVVSIKRGQDRLSLWTKTAADKELQVRIATRVKMSLDLPPETKLEFKPNQKVAE 261
BLAST of NO11G02210 vs. NCBI_GenBank
Match: EWM24979.1 (eukaryotic translation initiation factor iso4e [Nannochloropsis gaditana]) HSP 1 Score: 271.6 bits (693), Expect = 2.200e-69 Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0 Query: 57 MLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEENPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFKPNQKVGE 206 MLSWEEKLQKIYTFETVEDFWALFNSVVGPSRL +QADYYLFK+GVRPSYEENP GGVW FNLEK NKK+LEE WL+LVLG+IGETMED NDILGAVVSIKRGQDRLSLWTKTAADKELQV+IA RVK SLDLP T LEFKPNQKV E Sbjct: 1 MLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLSIQADYYLFKEGVRPSYEENPEGGVWMFNLEKGNKKRLEEVWLYLVLGLIGETMEDSNDILGAVVSIKRGQDRLSLWTKTAADKELQVRIATRVKMSLDLPPETKLEFKPNQKVAE 149
BLAST of NO11G02210 vs. NCBI_GenBank
Match: OQR85005.1 (eukaryotic initiation factor 4E [Achlya hypogyna]) HSP 1 Score: 169.5 bits (428), Expect = 1.200e-38 Identity = 73/164 (44.51%), Postives = 117/164 (71.34%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPKAN-PMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFK 199 KH LQ++W +Y+NPK +WEE L+KIYTF+TVEDFW LFN+V+ P++L ++Y+LFK+G+RP +E+ N GG W + + +L+++W+H++L +IGE +ED +D+ G VVS+++ QDRL++WTKTA ++ LQ + R + LDL + +L+F+ Sbjct: 46 KHPLQHKWVLWYDNPKKKLATETWEENLKKIYTFDTVEDFWCLFNNVLPPTKLSTGSNYHLFKEGIRPMWEDPINMKGGKWILTNTRQRRARLDDSWMHVMLALIGEALEDDDDVCGCVVSVRKSQDRLAVWTKTAVNEPLQRAVGRNFRKVLDLGKNEVLKFQ 209
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_008620139.1 (hypothetical protein SDRG_15735 [Saprolegnia diclina VS20] >EQC26390.1 hypothetical protein SDRG_15735 [Saprolegnia diclina VS20]) HSP 1 Score: 169.1 bits (427), Expect = 1.600e-38 Identity = 75/164 (45.73%), Postives = 116/164 (70.73%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPKAN-PMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFK 199 KH LQ++W +Y+NPK SWEE L+ IYTFETVEDFW LFN+V+ P++L ++Y+LFK+G+RP +E+ N GG W + + +L+++W+H++L +IGE +ED +DI G VVS+++ QDRL++WTKTA ++ LQ + R + LDL + +L+F+ Sbjct: 39 KHPLQHKWVLWYDNPKKKLATESWEENLKLIYTFETVEDFWCLFNNVLPPTKLSTGSNYHLFKEGIRPMWEDPINMKGGKWILTNTRQRRARLDDSWMHVMLALIGEALEDEDDICGCVVSVRKSQDRLAVWTKTAVNEPLQRTVGRNFRKVLDLGKNEVLKFQ 202
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_012199993.1 (hypothetical protein SPRG_06037 [Saprolegnia parasitica CBS 223.65] >KDO29497.1 hypothetical protein SPRG_06037 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 169.1 bits (427), Expect = 1.600e-38 Identity = 75/164 (45.73%), Postives = 116/164 (70.73%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPKAN-PMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFK 199 KH LQ++W +Y+NPK SWEE L+ IYTFETVEDFW LFN+V+ P++L ++Y+LFK+G+RP +E+ N GG W + + +L+++W+H++L +IGE +ED +DI G VVS+++ QDRL++WTKTA ++ LQ + R + LDL + +L+F+ Sbjct: 34 KHPLQHKWVLWYDNPKKKLATESWEENLKLIYTFETVEDFWCLFNNVLPPTKLSTGSNYHLFKEGIRPMWEDPINMKGGKWILTNTRQRRPRLDDSWMHVMLALIGEALEDEDDICGCVVSVRKSQDRLAVWTKTAVNEPLQRTVGRNFRKVLDLGKNEVLKFQ 197
BLAST of NO11G02210 vs. NCBI_GenBank
Match: GAX93172.1 (eukaryotic initiation factor 4E, putative [Pythium insidiosum]) HSP 1 Score: 169.1 bits (427), Expect = 1.600e-38 Identity = 73/153 (47.71%), Postives = 115/153 (75.16%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL 188 KH LQ+RW+ +Y+NP K N SWEE L+ +YTF+TVEDFW L+N+++ P++L L ++Y+LFK+G+RP +E+ N GG W F ++ + +L+E+WLH++L +IGET+ D +DI GAVVS+++ QDR+++W+ TA+ +ELQ I R ++ L Sbjct: 34 KHPLQHRWTLWYDNPKKRNSAESWEENLKLVYTFDTVEDFWCLYNNILTPTKLSLGSNYHLFKEGIRPMWEDPVNAKGGKWIFTNTRSRRARLDESWLHVMLSLIGETLHDEDDICGAVVSVRKSQDRIAIWSATASAQELQKAIGRGFRSCL 186
BLAST of NO11G02210 vs. NCBI_GenBank
Match: ETM38449.1 (hypothetical protein L914_15227 [Phytophthora parasitica]) HSP 1 Score: 167.5 bits (423), Expect = 4.500e-38 Identity = 75/167 (44.91%), Postives = 121/167 (72.46%), Query Frame = 0 Query: 36 AGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 A KH LQNRW +Y+NP K + SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL+++L +IGET++D +DI GAVVS+++ QDR+++W+ TA+ ++ Q I R + +L DL + ML+++ Sbjct: 36 ATKHPLQNRWVLWYDNPKKRHSTESWEENLKNVYTFNTVEDFWCLYNNILTPTKLSIGSNYHLFKEGIRPMWEDPVNAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLQDEDDICGAVVSVRKAQDRIAIWSATASAEDRQKAIGRGFRQALVDLGKNEMLKYQ 202
BLAST of NO11G02210 vs. NCBI_GenBank
Match: OWZ07907.1 (Eukaryotic initiation factor 4E [Phytophthora megakarya]) HSP 1 Score: 166.4 bits (420), Expect = 1.000e-37 Identity = 75/170 (44.12%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 33 EGGAGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 E A KH LQNRW +Y+NP K + SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFKDG+RP +E+ N GG W F ++ K +L+E WL+++L +IGET++D +D+ GAVVS+++ QDR+++W+ TA ++ Q I R + +L DL + L+++ Sbjct: 30 EDVATKHPLQNRWVLWYDNPKKRHSTESWEENLKNVYTFSTVEDFWCLYNNILAPTKLSIGSNYHLFKDGIRPMWEDPINAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLQDEDDVCGAVVSVRKAQDRIAIWSATANAEDRQKAIGRGFRQALVDLGKNETLKYQ 199
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_009538670.1 (hypothetical protein PHYSODRAFT_566314 [Phytophthora sojae] >EGZ05809.1 hypothetical protein PHYSODRAFT_566314 [Phytophthora sojae]) HSP 1 Score: 166.0 bits (419), Expect = 1.300e-37 Identity = 74/167 (44.31%), Postives = 119/167 (71.26%), Query Frame = 0 Query: 36 AGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 A KH LQNRW +Y+NP K N SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL+++L +IGET++D +D+ GAVVS+++ QDR+++W+ TA ++ Q I R + +L DL + L+++ Sbjct: 31 ATKHPLQNRWVLWYDNPKKRNSNESWEENLKNVYTFNTVEDFWCLYNNILAPTKLSIGSNYHLFKEGIRPMWEDPINAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLQDEDDVCGAVVSVRKAQDRIAIWSATANAEDRQKAIGRGFRQALVDLGKNETLKYQ 197
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_008895396.1 (hypothetical protein PPTG_04839 [Phytophthora parasitica INRA-310] >ETI38416.1 hypothetical protein F443_15818 [Phytophthora parasitica P1569] >ETK78618.1 hypothetical protein L915_15374 [Phytophthora parasitica] >ETL32049.1 hypothetical protein L916_15268 [Phytophthora parasitica] >ETL85297.1 hypothetical protein L917_15090 [Phytophthora parasitica] >ETN19563.1 hypothetical protein PPTG_04839 [Phytophthora parasitica INRA-310] >ETO67189.1 hypothetical protein F444_15798 [Phytophthora parasitica P1976] >ETP08300.1 hypothetical protein F441_15651 [Phytophthora parasitica CJ01A1] >ETP36353.1 hypothetical protein F442_15659 [Phytophthora parasitica P10297]) HSP 1 Score: 165.2 bits (417), Expect = 2.200e-37 Identity = 74/167 (44.31%), Postives = 120/167 (71.86%), Query Frame = 0 Query: 36 AGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 A KH LQNRW +Y+NP K + SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL+++L +IGET++D +DI GAVVS+++ QDR+++W+ TA+ ++ Q I R + +L DL + L+++ Sbjct: 36 ATKHPLQNRWVLWYDNPKKRHSTESWEENLKNVYTFNTVEDFWCLYNNILTPTKLSIGSNYHLFKEGIRPMWEDPVNAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLQDEDDICGAVVSVRKAQDRIAIWSATASAEDRQKAIGRGFRQALVDLGKNETLKYQ 202 The following BLAST results are available for this feature:
BLAST of NO11G02210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02210 ID=NO11G02210|Name=NO11G02210|organism=Nannochloropsis oceanica|type=gene|length=1930bpback to top protein sequence of NO11G02210.1 >NO11G02210.1-protein ID=NO11G02210.1-protein|Name=NO11G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=222bpback to top protein sequence of NO11G02210.2 >NO11G02210.2-protein ID=NO11G02210.2-protein|Name=NO11G02210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=166bpback to top protein sequence of NO11G02210.3 >NO11G02210.3-protein ID=NO11G02210.3-protein|Name=NO11G02210.3|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
|