NO11G02190, NO11G02190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02190 vs. NCBI_GenBank
Match: EWM24985.1 (hypothetical protein Naga_100122g18 [Nannochloropsis gaditana]) HSP 1 Score: 445.3 bits (1144), Expect = 3.500e-121 Identity = 220/358 (61.45%), Postives = 267/358 (74.58%), Query Frame = 0 Query: 340 EVMVPQMLYCLPGGGFNDIVVQLWRCVKYAVKTDRVLILGWENYLPVLPPYEQYFDLKNIPGLKLMSQWEAASIIRAAQARGQEVTHPSKQRLSLTALLGTGEEREDGPPFFIDVASLPNYVFHPKKQYTYHVLLYHKKGNQGTPEATLKHLIFSREIKQTFLSRWSQLPKPYIGMHVRGTDRKCGNKMTLKVFEKTQTLREHLKGAPVYLATDNPEAAVEQIQELKEKQGREITSFTYFPAKKEEENRGGKKER--------------------EANV-MPLHLNKVLSDEEKHQTNIDGFVDLLLLAFSEKFIMSCGGYSRLAGLLHWDKSIALSTLGLELEEGGDDDVNAVLSEA 677 E VP MLYCLPGGGFNDI VQLWRCV+YA+KT+RV+ILG+ENY+PVLPPYEQYF LK IPGL LMSQWEAA IR A+ARGQ VT +RL ++ LLG GEE EDGPPFFI AS+PN F+P+K Y+ H+L+YHKKGN+GTPE+T++H++FS E+K+TFL RW Q+ KPY+GMHVRGTDRKCG K +V K + LR L GAP+YLATDNPEA +E E ++ QGR+I SFTYFP+ ++ K R E +V +PLHLN+ L EEKHQTN+DGFVDLLLLAFS++FI SCGGYS+LA LLH DKS+AL+TLGL L DDV++VL EA Sbjct: 321 EERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDGPPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPH-DTDDVDSVLQEA 677
BLAST of NO11G02190 vs. NCBI_GenBank
Match: EWM24604.1 (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana]) HSP 1 Score: 240.7 bits (613), Expect = 1.300e-59 Identity = 136/350 (38.86%), Postives = 202/350 (57.71%), Query Frame = 0 Query: 348 YCLPGGGFNDIVVQLWRCVKYAVKTDRVLILGWENYLPVLPPYEQYFDLKNIPGLKLMSQWEAASIIRAAQARGQEVT-HPSKQRLSLTALLGTGEEREDGP-------PFFIDVASLPNYVFHPKKQYTYHVLLYHKKGNQGTPEATLKHLIFSREIKQTFLSRWSQLPKPYIGMHVRGTDRKCGN---KMTLKVFEKTQTLREHLKGAPVYLATDNPEAAVEQIQELKEKQGREITSFTYFPAKKEEEN----------RGGKKEREANVMPLHLNKVLSDEEKHQTNIDGFVDLLLLAFSEKFIMSCGGYSRLAGLLHWDKSIALSTLGLELEEGGDDDVNAVLSEA 677 +CL GG NDI V++W+C+++A T RVL+L ENY PV P+ YF L+ IPGL+ M+ ++AA+ A RG+ V+ PS+ + L LLG + D P PF L + F + Y V+++H++GN G+ L+H+ F+ I+ TFL RWS+L KPY+ +H+R TD+ C + + L+V + T + P+Y+A+D+PE + +EL+E+Q R++ SFTY P E+ N + + LHL+ LS +EKHQTNID FVDLLLLA SE+ + SCGGYS LA LH ++ + S LGL G +DD++ +L A Sbjct: 445 FCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAAT---AINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGT-SDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLP-APGPNDDLDMLLEAA 789
BLAST of NO11G02190 vs. NCBI_GenBank
Match: OUX93666.1 (hypothetical protein CBB77_08310 [Hyphomonas sp. TMED17]) HSP 1 Score: 71.2 bits (173), Expect = 1.400e-8 Identity = 81/333 (24.32%), Postives = 133/333 (39.94%), Query Frame = 0 Query: 347 LYCLPGGGFNDIVVQLWRCVKYAVKTDRVLIL--GWENYLPVLPPYEQYFDLKNIPGLKLMSQWEAASIIRAAQARGQEVTHPSKQRLSLTALLGTGEE----------REDGPPFFIDVASLPNYVFHPKKQYTYHVLLYHKKGNQGTPEATLKHLIFSREIKQTFLSRWSQLPKPYIGMHVRGTDRKCGNKMTLKVFEKTQTLREHLKGAPVYLATDNPEAAVEQIQELKEKQGREITSFTYFPAKKEEENRGGKKEREANVMPLHLNKVLSDEEKHQTNIDGFVDLLLLAFSEKFIM----------SCGGYSRLAGLLHWDKSIALSTL 658 + C P GG NDI+ Q+ +C +Y + +R +I+ EN + +YF K+ +I +A+A K +L+L + TG + + D ++V S F K Y+ VLL+H G L + I + R ++ + Y +HVR TD K K L + + P++LATDN Q L E + + SF+ P K+ + LH K SD+ + N D +DLL+L+ + + + + G+S+LA L W+ I + TL Sbjct: 5 ILCRPEGGLNDILCQIEKCCRYGERYNRTVIVDTNHENARNFHDDFSRYFFPKH------------KRLILSAKA--------IKPKLALMNVFPTGVQGKLNNYQTKWQGDWRGKLLEVESNQLLTFDFDKHYSQQVLLHHSTGGGTDSVFALLRIGVRPHIIKKLSERLQKIGRVYDAVHVRHTDYKTDYKSFLDNYSASSQ-------RPLFLATDNKSVVTHFKQALGENR---VFSFSALPEKQ---------------IALHSAK-FSDDATFRRNTDAILDLLMLSLAVRLQIFQINQNPIGATVSGFSQLA-LNLWESKILIKTL 290
BLAST of NO11G02190 vs. NCBI_GenBank
Match: OUV83351.1 (hypothetical protein CBC91_00675 [Rickettsiales bacterium TMED131]) HSP 1 Score: 70.1 bits (170), Expect = 3.100e-8 Identity = 72/296 (24.32%), Postives = 132/296 (44.59%), Query Frame = 0 Query: 347 LYCLPGGGFNDIVVQLWRCVKYAVKTDRVLILGWENYLPVLPPYEQYFDLKNIPGLKLMSQWEAASIIRAAQARGQEVTHPSKQRLSLTALLGTGEER--EDGPPFFIDVASLPNYVFHPKKQYTYHVLLYHKKGNQGTPEATLKHLIFSREIKQTFLSRWSQLPKPYIGMHVRGTDRKCGNKMTLKVFEKTQTLREHLKGAPVYLATDNPEAAVEQIQELKEKQGREITSFTYFPAKK--------EEENRGGKKEREANV-MPLHLNKVLSDEEKHQTNIDGFVDLLLLAFSEK 632 LY +P GG ND+ VQ+ R +KY + R+L+L +N + + + +FD++ I + + ++IIR +P+ LL ++ ++G F ++ P+K+ +++Y G G LK LIF +IK+ + + +PY+ +HVR TDRKC K +RE +Y+ TD+ + + + +G + +T FP+ K E NR + ++ M + +K+LS+ + GF++LL S + Sbjct: 9 LYFIPKGGINDMFVQIERVIKYCTRYKRILLLDTKNSIYKI-NFSDFFDIEYIYCNIIYN----SNIIREILKNKSLSIYPAILTTDSIDLLNIDKKLTWKEGNTCF---CYKDTFLKLPEKEVKEDIIVYAACGG-GNGFIFLKKLIFKDKIKEICIRKLRGFKRPYLCIHVRNTDRKCNYKEMY-----MDNMREIHSYNLIYICTDD-----KNVITFFKSKGLNVVCYTSFPSGKYRSLHKTTEIPNRKKMYDIFVDIYMATNCSKILSNSQ------GGFINLLRQCHSNR 279 The following BLAST results are available for this feature:
BLAST of NO11G02190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02190 ID=NO11G02190|Name=NO11G02190|organism=Nannochloropsis oceanica|type=gene|length=2433bpback to top protein sequence of NO11G02190.1 >NO11G02190.1-protein ID=NO11G02190.1-protein|Name=NO11G02190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=693bpback to top Synonyms
Publications
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