NO11G01410, NO11G01410 (gene) Nannochloropsis oceanica

Overview
NameNO11G01410
Unique NameNO11G01410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length953
Alignment locationchr11:483872..484824 +

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Properties
Property NameValue
DescriptionMolybdopterin synthase catalytic subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:483872..484824 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006777Mo-molybdopterin cofactor biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR036563MoaE_sf
IPR003448Mopterin_biosynth_MoaE
Homology
BLAST of NO11G01410 vs. NCBI_GenBank
Match: EWM25081.1 (molybdenum cofactor synthesis isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 252.3 bits (643), Expect = 1.200e-63
Identity = 120/167 (71.86%), Postives = 139/167 (83.23%), Query Frame = 0
Query:    7 YVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGA----HAWKVNAEWQGGDGVISKK 170
            YV V D+++DLN+L+ +V D GAGAIATFLGVTRDNF GK VVRL+YEGYVPMAE VMH+I  E+R+RW VLS+AMEHR+G CPVGE SV IAISS HRREALEAVAFAID+IK NVP+WKKE YADGSYH+GPDGS +EC G+     AWK N EW+GGD  ISK+
Sbjct:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKR 207          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_012206934.1 (molybdopterin converting factor [Saprolegnia parasitica CBS 223.65] >KDO22411.1 molybdopterin converting factor [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 164.1 bits (414), Expect = 4.200e-37
Identity = 88/158 (55.70%), Postives = 104/158 (65.82%), Query Frame = 0
Query:    4 LPDYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRW-AVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGAHAWKVNAEWQ 161
            + DYV+V  A +  +  V+RV    AGAI+TF+G TRD+FNGK V  LEYEGYVPMAEK + AIC  IR +W  V+ VAM HRLG   VGEASV IA+SSPHRREALEAVA+AID +KA VP+WK E YA                 A  WK N EW+
Sbjct:    1 MTDYVVVTMAPLSADDAVRRVEHASAGAISTFIGTTRDSFNGKVVEYLEYEGYVPMAEKELLAICASIRRQWPGVVGVAMAHRLGVVAVGEASVIIAVSSPHRREALEAVAYAIDTLKARVPIWKLEKYA---------------GDARMWKENPEWR 143          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_008604054.1 (molybdopterin converting factor, subunit 2 [Saprolegnia diclina VS20] >EQC42631.1 molybdopterin converting factor, subunit 2 [Saprolegnia diclina VS20])

HSP 1 Score: 162.9 bits (411), Expect = 9.500e-37
Identity = 86/158 (54.43%), Postives = 104/158 (65.82%), Query Frame = 0
Query:    4 LPDYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRW-AVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGAHAWKVNAEWQ 161
            + DYV+V  A + ++  V+ V    AGAI+TF+G TRD+FNGK V  LEYEGYVPMAEK + AIC  IR +W  V+ VAM HRLG   VGEASV +A+SSPHRREALEAVA+AID +KA VP+WK E YA  S                 WK N EW+
Sbjct:    1 MTDYVVVTPAPLSVDDAVRHVEHASAGAISTFIGTTRDSFNGKVVEYLEYEGYVPMAEKELLAICASIRRQWPGVVGVAMMHRLGVVAVGEASVVLAVSSPHRREALEAVAYAIDTLKARVPIWKLEKYAGDS---------------RMWKENPEWR 143          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_011417725.1 (PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >XP_011417726.1 PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas])

HSP 1 Score: 162.5 bits (410), Expect = 1.200e-36
Identity = 74/130 (56.92%), Postives = 97/130 (74.62%), Query Frame = 0
Query:    6 DYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGS 136
            DY+ + D  +D+N + Q V DP  GAI+ F+G+TRDNF+GK V+RLEYE Y PMA+K M  IC  IR +W + S+AM HR+   P+ EAS+ IAISSPHR+E+L+AV +AID +KA VP+WKKE YAD S
Sbjct:    2 DYIEITDEILDVNEISQMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHSIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES 131          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_022332763.1 (molybdopterin synthase catalytic subunit-like [Crassostrea virginica] >XP_022332764.1 molybdopterin synthase catalytic subunit-like [Crassostrea virginica])

HSP 1 Score: 160.2 bits (404), Expect = 6.100e-36
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query:    6 DYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGAHAWKVNAE 159
            D++ + +  +D+N++ Q V DP  GA++ F+G+TRDNF+GK V+RLEYE Y PMA+K M  IC  IR +W + S+AM HR+   P+ EAS+ IAISSPHR+E+L+AV +AID +KA VP+WKKE YAD S                AWK N E
Sbjct:    2 DFIEITEGVLDVNNISQMVTDPSCGAVSIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWQIHSIAMIHRINEVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES---------------SAWKENKE 139          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_022328725.1 (molybdopterin synthase catalytic subunit-like [Crassostrea virginica])

HSP 1 Score: 159.8 bits (403), Expect = 8.000e-36
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query:    6 DYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGAHAWKVNAE 159
            D++ + +  +D+N++ Q V DP  GA++ F+G+TRDNF+GK V+RLEYE Y PMA+K M  IC  IR +W + S+AM HR+   P+ EAS+ IAISSPHR+E+L+AV +AID +KA VP+WKKE YAD S                AWK N E
Sbjct:    2 DFIEITEGVLDVNNISQMVTDPSCGAVSIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWQIHSIAMIHRINEVPISEASIIIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES---------------SAWKENKE 139          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_011426503.1 (PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >XP_011434216.1 PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >EKC23108.1 Molybdenum cofactor synthesis protein 2B [Crassostrea gigas])

HSP 1 Score: 159.5 bits (402), Expect = 1.000e-35
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 0
Query:    6 DYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGS 136
            DY+ + D  +D+N +   V DP  GAI+ F+G+TRDNF+GK V+RLEYE Y PMA+K M  IC  IR +W + ++AM HR+   P+ EAS+ IAISSPHR+E+L+AV +AID +KA VP+WKKE YAD S
Sbjct:    2 DYIEITDEILDVNKISHMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHNIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES 131          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_009054817.1 (hypothetical protein LOTGIDRAFT_189273, partial [Lottia gigantea] >ESO94538.1 hypothetical protein LOTGIDRAFT_189273, partial [Lottia gigantea])

HSP 1 Score: 156.4 bits (394), Expect = 8.900e-35
Identity = 71/130 (54.62%), Postives = 97/130 (74.62%), Query Frame = 0
Query:    6 DYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGS 136
            D++ + + ++D+NS +  V  P  GA++TFLG TRDNF+GK VVRLEYE Y+PMA+K M  IC  +R +W V ++ M HR+G  P+ EAS+ IAISSPHR+E+L+A+ FAID +KA VP+WKKE Y D S
Sbjct:    2 DHIDIIEGKIDVNSTIDLVISPSCGAVSTFLGTTRDNFDGKKVVRLEYEAYIPMAKKKMLEICQLVREKWKVENIVMIHRIGLVPIKEASIIIAISSPHRKESLDALQFAIDTLKAIVPIWKKEVYEDES 131          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: GAX83527.1 (hypothetical protein CEUSTIGMA_g10952.t1 [Chlamydomonas eustigma])

HSP 1 Score: 155.6 bits (392), Expect = 1.500e-34
Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   10 VADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHK 139
            V    +D+N+ V  V  P AGAI+TF GVTRDNF+GK V+RLEYE Y+PMA K +  IC+EI+ +W V  VAM HR GT  +GE SV IAISS HR+ ALEAV +AID +KA VP+WK+EF+ DGS  K
Sbjct:   10 VTSEPLDINAYVSFVSTPAAGAISTFSGVTRDNFDGKAVLRLEYEAYIPMAIKKLEEICMEIKRKWEVSRVAMAHRTGTVLIGEPSVIIAISSAHRKPALEAVHWAIDELKATVPIWKREFFEDGSLWK 138          
BLAST of NO11G01410 vs. NCBI_GenBank
Match: XP_001602197.2 (PREDICTED: molybdopterin synthase catalytic subunit [Nasonia vitripennis])

HSP 1 Score: 155.2 bits (391), Expect = 2.000e-34
Identity = 79/172 (45.93%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    1 MERLPDYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVRLEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAISSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGAHAWKVNAEWQGGDGVISKKEVK 173
            M  + D+V +  +Q+++N ++Q V  P  GA++TF+G TRDNF  K VV+LEYE Y PMA K M ++C +IR++W V  +A+ HRLG  PV EAS+ IAISSPHR+E+L+AV FAIDA+K +VP+WKKE Y +                   WK N E      V   KEV+
Sbjct:    1 MAEVKDFVGLRSSQLNVNDIIQIVISPSCGAVSTFIGTTRDNFEQKKVVKLEYEAYEPMAVKEMQSVCNKIRSQWNVEKIAIYHRLGEVPVTEASIVIAISSPHRQESLQAVQFAIDAVKTSVPIWKKEIYENDE---------------PQWKENKECSWASNVAQIKEVE 157          
The following BLAST results are available for this feature:
BLAST of NO11G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25081.11.200e-6371.86molybdenum cofactor synthesis isoform cra_a [Nanno... [more]
XP_012206934.14.200e-3755.70molybdopterin converting factor [Saprolegnia paras... [more]
XP_008604054.19.500e-3754.43molybdopterin converting factor, subunit 2 [Saprol... [more]
XP_011417725.11.200e-3656.92PREDICTED: molybdopterin synthase catalytic subuni... [more]
XP_022332763.16.100e-3649.67molybdopterin synthase catalytic subunit-like [Cra... [more]
XP_022328725.18.000e-3649.67molybdopterin synthase catalytic subunit-like [Cra... [more]
XP_011426503.11.000e-3555.38PREDICTED: molybdopterin synthase catalytic subuni... [more]
XP_009054817.18.900e-3554.62hypothetical protein LOTGIDRAFT_189273, partial [L... [more]
GAX83527.11.500e-3458.91hypothetical protein CEUSTIGMA_g10952.t1 [Chlamydo... [more]
XP_001602197.22.000e-3445.93PREDICTED: molybdopterin synthase catalytic subuni... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002125NSK002125Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01410.1NO11G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591149gene_5023Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100098g7gene5422Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01410.1NO11G01410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01410 ID=NO11G01410|Name=NO11G01410|organism=Nannochloropsis oceanica|type=gene|length=953bp
ATCCGACTGCACTGCGGGTGGCAATGACTCCTCCGATCATGGGCCGAGGA
GGGTCCAGAGCGGTCGCCGATGAATGAAGGCTTGTACCAGGTCGATTGAC
AATGAAACCCTGAGCATTGCATGCAAGCGTTTTGAGGCTGCCTGGCATAC
TGGCGATTGAAGTGGGTATCGACACTTTTGGGAGAGTGTTTAACTGATCT
CACACAACCTCCCCACCACCACTGTCCACATCACTACAGCGTCCCTCTCC
CTGATACCCGTGAGGACGATAACGACTAGAGAGCAGCAGCAAACGCAATG
GAGCGGTTACCAGACTATGTCCTGGTCGCTGACGCTCAGGTGGATTTGAA
TTCGCTGGTTCAGAGGGTTGGGGACCCTGGGGCAGGGGCCATTGCCACTT
TCCTGGGCGTAACACGGGACAATTTCAATGGCAAGCCCGTCGTCCGCCTT
GAGTACGAGGGCTACGTGCCCATGGCTGAAAAGGTGATGCATGCAATTTG
CGTCGAGgtaagaacgtgcgtgcatttgggtgtcatcatcaggttgcagc
cttatcattgtccctctccttcccacccctctagATCCGAAACCGGTGGG
CCGTCCTTTCCGTTGCCATGGAGCACCGGCTTGGCACTTGCCCAGTAGGG
GAGGCAAGCGTGGGAATCGCAATTTCATCTCCGCATCGGCGCGAAGCTCT
GGAAGCAGTTGCATTTGCGATAGATGCCATCAAGGCGAATGTCCCTGTAT
GGAAGAAGGAGTTCTACGCTGATGGCAGCTACCACAAAGGACCGGATGGG
TCGTGCATCGAGTGTGCCGGGGCACATGCATGGAAAGTTAATGCAGAATG
GCAGGGTGGGGATGGAGTGATCAGCAAGAAGGAAGTGAAAAAAGCGAGGC
AGGAAGATGACCTCTCTGTAAATCAAAATGAAATATGAAACAATTTGGCC
ATG
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protein sequence of NO11G01410.1

>NO11G01410.1-protein ID=NO11G01410.1-protein|Name=NO11G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MERLPDYVLVADAQVDLNSLVQRVGDPGAGAIATFLGVTRDNFNGKPVVR
LEYEGYVPMAEKVMHAICVEIRNRWAVLSVAMEHRLGTCPVGEASVGIAI
SSPHRREALEAVAFAIDAIKANVPVWKKEFYADGSYHKGPDGSCIECAGA
HAWKVNAEWQGGDGVISKKEVKKARQEDDLSVNQNEI*
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Synonyms
Publications