NO11G01090, NO11G01090 (gene) Nannochloropsis oceanica

Overview
NameNO11G01090
Unique NameNO11G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1012
Alignment locationchr11:403568..404579 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:403568..404579 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO11G01090 vs. NCBI_GenBank
Match: XP_002297471.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86210.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 80.1 bits (196), Expect = 1.200e-11
Identity = 60/204 (29.41%), Postives = 97/204 (47.55%), Query Frame = 0
Query:  109 LLAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDN----------AAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAAC---------PLMQAAL-----EKADKQKIQ----------PVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKLGKLADAGLIQ 279
            LLA    + P L + + NP+F  +   + S+P+ TL R Q +N            + F++   G LGEHF  LG+++++++ Q K N            PL + AL     E+  ++K Q          P N  +   A  + V  IL + +LR++LLDP MQ ++Q  +  D      LH Y+ +     KL KL +AGL++
Sbjct:  282 LLAHISENHPNLERGMNNPKFMAVLHGMQSNPKETLERLQRENDGDNGDGSNEGVLEFVKEFCGVLGEHFVRLGEEEEEKAQQQKQNLQWSEPKVRELGPLEEKALHTHKIEQEKQRKEQSTTITKSASTPSNTTQTTNAMDDQVASILANDDLRSILLDPKMQQIMQECTSQD----GKLHYYMRHEEYGPKLRKLMEAGLLK 481          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: POM78569.1 (Plectin-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 73.6 bits (179), Expect = 1.100e-9
Identity = 49/170 (28.82%), Postives = 76/170 (44.71%), Query Frame = 0
Query:  122 KALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPLMQ-------------AALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKLGKLADAGLIQ 279
            KAL+NP F     ++  DP   +++YQ D A    LR  M  LG HFEELG   +  S + K+    P +Q              A+   D+ + Q +  +++   E+E V RIL++PEL   L D  +   L+    S       L +    P++  KL  L    ++Q
Sbjct:  137 KALQNPSFSKAIREMQQDPHTAILKYQKDPAVSTMLRDFMEFLGNHFEELGASTENASSEKKSERHPPSLQDLQLYDNQTTPRAPAIVDLDEARRQAIAGMQRTPEEEEQVQRILKNPELLAALSDGDLMQRLRGCQHSP----GELQRVAQDPVLGPKLRLLVQHNMVQ 302          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: XP_009533789.1 (hypothetical protein PHYSODRAFT_352430 [Phytophthora sojae] >XP_009540145.1 hypothetical protein PHYSODRAFT_551801 [Phytophthora sojae] >EGZ04400.1 hypothetical protein PHYSODRAFT_551801 [Phytophthora sojae] >EGZ11044.1 hypothetical protein PHYSODRAFT_352430 [Phytophthora sojae])

HSP 1 Score: 73.2 bits (178), Expect = 1.500e-9
Identity = 52/175 (29.71%), Postives = 78/175 (44.57%), Query Frame = 0
Query:  122 KALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPLM------------------QAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKLGKLADAGLIQ 279
            KAL+NP F     ++  DPQA +++YQ D A    LR  M  LG HFEELG  ++  S Q+      P +                    A+   D+ + Q +  +++   E+E V RIL +PEL   L D T+   L +  +S     S L +    P +  KL  L    ++Q
Sbjct:  143 KALQNPAFTTAIAEMQQDPQAAVLKYQKDPAVSTMLRDFMEFLGNHFEELGASEEAASPQSSATQHQPAVGRDLRVYNSNQTPPAASTPPAIVDLDETRRQVIAGMQRTPEEEEQVQRILENPELLAALSDGTLMQRLHACQQSP----SELQRLAQDPGLGPKLRLLVQHNMVQ 313          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: ETP52317.1 (hypothetical protein F442_02623 [Phytophthora parasitica P10297])

HSP 1 Score: 72.4 bits (176), Expect = 2.500e-9
Identity = 51/164 (31.10%), Postives = 78/164 (47.56%), Query Frame = 0
Query:  108 ELLAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPL---MQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKL 269
            EL  EK+  +P L +AL+NP F    +++  DP A +++YQ D A    LR  M  LG HFEE  +  Q   G   +N    L      A+   D+ + Q +  +++   E+E V RIL++PEL   L D  +   +    ES      + H     P++  KL
Sbjct:  149 ELFFEKLARNPKLAQALQNPSFSKSISEMQKDPAAAILKYQKDPAVSTMLRDFMEFLGNHFEE-QQDSQPLEGLRMSNKHKTLDFPKGPAIVDLDETQRQAIAGMQRSPEEEEQVQRILKNPELLAALSDGNLMQRIHDCQESPGELQRLAHD----PVLGPKL 307          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: KUG02162.1 (Plectin protein [Phytophthora nicotianae])

HSP 1 Score: 72.4 bits (176), Expect = 2.500e-9
Identity = 54/191 (28.27%), Postives = 82/191 (42.93%), Query Frame = 0
Query:  108 ELLAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQ-----------------QQQQSGQNKTNAACPL---MQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKLGKLADAGLIQ 279
            E   EK+  +P L +AL+NP F    +++  DP A +++YQ D A    LR  M  LG HFEELG                    Q   G   +N    L      A+   D+ + Q +  +++   E+E V RIL++PEL   L D  +   +    ES      + H     P++  KL  L    ++Q
Sbjct:  149 ERFFEKLARNPKLAQALQNPSFSKSISEMQKDPAAAILKYQKDPAVSTMLRDFMEFLGNHFEELGASAEAAKXXXXXXXXXXXXSQPLEGLRMSNKHKTLDFPKGPAIVDLDETRRQAIAGMQRSPEEEEQVQRILKNPELLAALSDGNLMQRIHDCQESPGELQRLAHD----PVLGPKLRLLVQHNMVQ 335          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: ETI54512.1 (hypothetical protein F443_02650 [Phytophthora parasitica P1569] >ETM54076.1 hypothetical protein L914_02527 [Phytophthora parasitica])

HSP 1 Score: 70.5 bits (171), Expect = 9.600e-9
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 0
Query:  108 ELLAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPL---MQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKL 269
            E   EK+  +P L +AL+NP F    +++  DP A +++YQ D A    LR  M  LG HFEE  +  Q   G   +N    L      A+   D+ + Q +  +++   E+E V RIL++PEL   L D  +   +    ES      + H     P++  KL
Sbjct:  149 ERFFEKLARNPKLAQALQNPSFSKSISEMQKDPAAAILKYQKDPAVSTMLRDFMEFLGNHFEE-QQDSQPLEGLRMSNKHKTLDFPKGPAIVDLDETRRQAIAGMQRSPEEEEQVQRILKNPELLAALSDGNLMQRIHDCQESPGELQRLAHD----PVLGPKL 307          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: XP_002902749.1 (plectin-like protein [Phytophthora infestans T30-4] >EEY55919.1 plectin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 70.5 bits (171), Expect = 9.600e-9
Identity = 54/168 (32.14%), Postives = 79/168 (47.02%), Query Frame = 0
Query:  108 ELLAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQ------------QQQQSGQ--------NKTNAACPLMQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVL 256
            E   EK+  +P L +AL+NP F    +++  DP A +++YQ D+A    LR  +  LG HFEELG              Q QQ  Q        NK  +  P  + A+   D+ + Q +  + +   E+E V  IL++PEL   L D  +   LQ+   S   RGS L
Sbjct:  150 ERFLEKLAHNPKLAQALQNPSFSKAISEIQQDPAAAILKYQKDSAVSAMLRDFIEFLGNHFEELGASAEAASSQKKPAPQPQQDSQPLEGLRMNNKLKSGDP-NRPAIVDLDETRRQAIAGMRRAPEEEEQVQHILKNPELLAALSDGNLMQRLQA---SMTERGSGL 313          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: XP_013408030.1 (uncharacterized protein LOC106172003 [Lingula anatina])

HSP 1 Score: 70.5 bits (171), Expect = 9.600e-9
Identity = 45/168 (26.79%), Postives = 81/168 (48.21%), Query Frame = 0
Query:  110 LAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPLMQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKLGKLADAGLI 278
            L  K+ ++ +L K L +P F    T+  ++PQA +++Y+ +     F +   G LG+HF  +   Q Q+   +  +   P      + AD       N  +   A+++ +  IL DPE+R +LLDP +Q + ++  +  +    +L      P    K+ KL DAGL+
Sbjct:  161 LLGKVENNEVLFKRLSDPSFTKALTEFQTNPQAAMLKYKDNQEVQQFFKEFCGLLGDHFSNMPDGQPQKPKTDTISTTMP-----SQGADISVRSSTNPNQPTAADEKKMQEILSDPEIRFVLLDPFIQQLFETLRKDPEKGQRMLS--TAQPAQQEKIQKLVDAGLL 321          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: GAY01588.1 (Hypothetical protein PINS_009430 [Pythium insidiosum])

HSP 1 Score: 69.7 bits (169), Expect = 1.600e-8
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 0
Query:  123 ALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPLMQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTM 238
            AL+NP F     DL  DP+A ++++  D A    L+  M  +G HFEELGK  ++   +   ++  PL    +   D  + Q + ++ +  AE+E V RILR+PEL   L D ++
Sbjct:  122 ALKNPHFMSAINDLQRDPKAAILKHGKDPAVSAMLKDFMEFMGSHFEELGKAAEKDEKKVSEDSQQPLPPPPIVDLDAVRRQAIEEMPRAPAEEEQVQRILRNPELLAALSDASL 236          
BLAST of NO11G01090 vs. NCBI_GenBank
Match: GBG23851.1 (Stress-induced-phosphoprotein 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 68.6 bits (166), Expect = 3.600e-8
Identity = 44/169 (26.04%), Postives = 76/169 (44.97%), Query Frame = 0
Query:  110 LAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHDNAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPLMQAALEKADKQKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKNRGSVLHKYIPYPIIAAKLGKLADAGLIQ 279
            L E+IL++P+L + + +PR   +F  +  +P A +  Y     A  F+   M  LGEHF E+G + ++Q  Q    A  P +                  +++   Q  V ++L   +LR +L DP  Q V+Q  +       + L +Y+  P    +   + D GLI+
Sbjct:  387 LQERILANPILARGMADPRSAALFQRIQENPTAAMKEYGTTPDARAFIEEFMKTLGEHFTEMGTELEKQQVQAAVEATAPAVMT----------------QEEAKVQREVKKVLARDDLREILSDPETQAVMQKCAADP----TKLQEYMQDPKWRNRFALMRDNGLIR 535          
The following BLAST results are available for this feature:
BLAST of NO11G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 16
Match NameE-valueIdentityDescription
XP_002297471.11.200e-1129.41predicted protein [Thalassiosira pseudonana CCMP13... [more]
POM78569.11.100e-928.82Plectin-like protein [Phytophthora palmivora var. ... [more]
XP_009533789.11.500e-929.71hypothetical protein PHYSODRAFT_352430 [Phytophtho... [more]
ETP52317.12.500e-931.10hypothetical protein F442_02623 [Phytophthora para... [more]
KUG02162.12.500e-928.27Plectin protein [Phytophthora nicotianae][more]
ETI54512.19.600e-930.49hypothetical protein F443_02650 [Phytophthora para... [more]
XP_002902749.19.600e-932.14plectin-like protein [Phytophthora infestans T30-4... [more]
XP_013408030.19.600e-926.79uncharacterized protein LOC106172003 [Lingula anat... [more]
GAY01588.11.600e-833.91Hypothetical protein PINS_009430 [Pythium insidios... [more]
GBG23851.13.600e-826.04Stress-induced-phosphoprotein 1 [Aurantiochytrium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002162NSK002162Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01090.1NO11G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671172gene_4987Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01090.1NO11G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01090 ID=NO11G01090|Name=NO11G01090|organism=Nannochloropsis oceanica|type=gene|length=1012bp
CACCCATACACAAAAGTATGCATTCAATTGCACAGAAATGTATTGAGACT
GACGACAGCAGCGCTCTTACGCTCCTGGAAGAAATGATGATGGCGGCCAC
CATCACCACGGGGTCTAGGCTATTACCACCCCCTAAGTCCACAAAAGCTG
ACAATGCCTCTTTTGGTAGCAGTTTAAAGGCGGGCTTCCTCACCAAGTCT
TCCTCGCGAGATGCACAGTATCATAACAGCAGTAGTAGCGGCAGCAGCAG
CAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCGACAACAACACCCAAA
TCGCTGTTTCCATGTCCTCGCCCTCGTCTGCATCAGCAGAGTTATTGGCT
GAGAAGATCTTGTCTTCCCCTTTGCTTCGAAAGGCCCTCGAGAATCCTCG
CTTCCAAGTCATTTTTACCGACCTCGGCTCCGACCCGCAAGCTACCCTTG
TCCGCTATCAGCATGACAACGCCGCCATGGGTTTCCTGAGAGGGCTCATG
GGGGCTTTAGGCGAGCATTTTGAAGAGTTGGGAAAGCAGCAGCAGCAGCA
GTCAGGCCAGAACAAGACCAACGCCGCATGTCCCTTGATGCAGGCAGCTC
TCGAGAAGGCAGATAAGCAGAAAATTCAGCCGGTGAATGATCTCGAACAA
GACAAGGCAGAGCAAGAGGCCGTCAATCGCATTTTGCGTGACCCAGAGCT
GCGGAACCTTCTTCTCGATCCAACGATGCAGACGGTACTTCAAAGCTTTT
CAGAGAGCGATAAGAATAGGGGCTCGGTGTTACACAAGTACATTCCATAC
CCGATCATCGCCGCCAAGCTGGGTAAGCTTGCTGATGCGGGCCTTATTCA
GACTAAATGATAACATGCGAAGTGACAGGAAGATAGCTCTGAATGTAGGC
GACAGAGGCACTGTAAGCGCAATCTTTTGTGGAAGCAATAAATTGCTTTT
AACACAGTTACCAGCACCTAACCGAGACAATCCTGTTAAAAAGAATGTCG
CCTCGCTTCCCC
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protein sequence of NO11G01090.1

>NO11G01090.1-protein ID=NO11G01090.1-protein|Name=NO11G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MHSIAQKCIETDDSSALTLLEEMMMAATITTGSRLLPPPKSTKADNASFG
SSLKAGFLTKSSSRDAQYHNSSSSGSSSSSSSSNSSSSSDNNTQIAVSMS
SPSSASAELLAEKILSSPLLRKALENPRFQVIFTDLGSDPQATLVRYQHD
NAAMGFLRGLMGALGEHFEELGKQQQQQSGQNKTNAACPLMQAALEKADK
QKIQPVNDLEQDKAEQEAVNRILRDPELRNLLLDPTMQTVLQSFSESDKN
RGSVLHKYIPYPIIAAKLGKLADAGLIQTK*
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Synonyms
Publications