NO11G00950, NO11G00950 (gene) Nannochloropsis oceanica

Overview
NameNO11G00950
Unique NameNO11G00950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length800
Alignment locationchr11:364059..364858 +

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Properties
Property NameValue
DescriptionAppr-1-p processing enzyme family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:364059..364858 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002589Macro_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_005856302.1 (hypothetical protein NGA_2111400, partial [Nannochloropsis gaditana CCMP526] >EKU20082.1 hypothetical protein NGA_2111400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 281.2 bits (718), Expect = 2.700e-72
Identity = 138/199 (69.35%), Postives = 166/199 (83.42%), Query Frame = 0
Query:    6 GQVAAAATTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQPSSR 205
            G+ AA+   R F LS++  LQI VGDLTK +V AIVNAANERMLGGGGVDGA+HRAAGP+LY+AC+AVPE+ PGVRCPTGEAR+TPGF+LPA +VVHTVGP+Y+ND  SA LLRA H SSL LA ++G+ SVAFPA+SCGIYGYP S+A+ IAV+SCIDF  EQ   SPL+NIEF+LFSQ+ + AWVAAAE+L   S+R
Sbjct:   41 GKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTR 239          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: EWM25092.1 (appr-1-p processing enzyme family protein [Nannochloropsis gaditana])

HSP 1 Score: 281.2 bits (718), Expect = 2.700e-72
Identity = 138/199 (69.35%), Postives = 166/199 (83.42%), Query Frame = 0
Query:    6 GQVAAAATTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQPSSR 205
            G+ AA+   R F LS++  LQI VGDLTK +V AIVNAANERMLGGGGVDGA+HRAAGP+LY+AC+AVPE+ PGVRCPTGEAR+TPGF+LPA +VVHTVGP+Y+ND  SA LLRA H SSL LA ++G+ SVAFPA+SCGIYGYP S+A+ IAV+SCIDF  EQ   SPL+NIEF+LFSQ+ + AWVAAAE+L   S+R
Sbjct:    6 GKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTR 204          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: PNW80955.1 (hypothetical protein CHLRE_07g336850v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 209.9 bits (533), Expect = 7.700e-51
Identity = 105/187 (56.15%), Postives = 138/187 (73.80%), Query Frame = 0
Query:   13 TTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELT 200
            ++R F L   T+L IK GD+T   V AIVNAANERMLGGGGVDGAIHRAAGP+L  AC  VPE+ PGVRCPTGEAR+TPGF L A  V+HTVGP+Y ND VSAPLL + ++SS+ LA+++G+AS++FP IS G++GYP  KAA++A++S  + +        ++ + F+LF Q  +  +V AAE LT
Sbjct:    2 SSRTFPLRQGTKLVIKQGDITVEDVDAIVNAANERMLGGGGVDGAIHRAAGPQLVRACAEVPEVYPGVRCPTGEARITPGFHLKARHVIHTVGPIYHNDRVSAPLLASAYRSSVELAAQQGLASLSFPGISTGVFGYPWDKAAQVALESVQEALVAAGEGCSVREVRFVLFGQPLYDHFVEAAEALT 188          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_005847605.1 (hypothetical protein CHLNCDRAFT_23080 [Chlorella variabilis] >EFN55503.1 hypothetical protein CHLNCDRAFT_23080 [Chlorella variabilis])

HSP 1 Score: 208.0 bits (528), Expect = 2.900e-50
Identity = 112/190 (58.95%), Postives = 133/190 (70.00%), Query Frame = 0
Query:   19 LSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEEL-TQPSSRGAE 208
            L+  T L ++ GDLTK A  AIVNAANERMLGGGGVDGAIHRAAGP L +AC+ VPE+  GVRCPTGEAR+T G  LPA  V+HTVGPVY N   SAPLL + ++SSL LA++ G+ +VAFPAISCGI+GYP  +AA IAV++C      Q     LQ I F LF Q    AW+ AAEE   QP+    E
Sbjct:   10 LTPTTLLVLRRGDLTKFAGDAIVNAANERMLGGGGVDGAIHRAAGPSLLEACRQVPEVRQGVRCPTGEARMTTGAGLPARNVIHTVGPVYHNAEASAPLLESAYRSSLQLANQHGLKTVAFPAISCGIFGYPFDEAAEIAVRTC------QQEAGQLQEIHFFLFGQPILDAWLQAAEEAQLQPAEERQE 193          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: KXZ54768.1 (hypothetical protein GPECTOR_4g838 [Gonium pectorale])

HSP 1 Score: 206.1 bits (523), Expect = 1.100e-49
Identity = 101/193 (52.33%), Postives = 138/193 (71.50%), Query Frame = 0
Query:    6 GQVAAAATTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEEL 199
            G   A A  +V+ L+   +L +K GD+T  +V AIVNAANERMLGGGGVDGAIHRAAGP+L  AC  V E+ PGVRCPTGEAR+T GF+LPA  V+HTVGP+YEND VSAPLL + ++SS+ LA   G+ S++FP IS G++GYP  KAA++AV +  + +        ++ + F++F++  +  +V AAE+L
Sbjct:   23 GAGPAMAPEKVYPLAHGAKLVLKTGDITTESVDAIVNAANERMLGGGGVDGAIHRAAGPQLVRACAEVKEVEPGVRCPTGEARITRGFQLPAKHVIHTVGPIYENDRVSAPLLASAYRSSVQLAQENGLVSMSFPGISTGVFGYPFDKAAQVAVSTVDEAVAAAGEGGSVKEVRFVIFNRPLYDEFVTAAEKL 215          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: OQR98262.1 (hypothetical protein ACHHYP_08929 [Achlya hypogyna])

HSP 1 Score: 203.8 bits (517), Expect = 5.500e-49
Identity = 101/186 (54.30%), Postives = 134/186 (72.04%), Query Frame = 0
Query:   13 TTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEEL 199
            TTR + LS    + + VGD+T+ A  A+VNAANERMLGG GVDGAIH+AAGP+LY+AC+ VP++   VRCP GEAR+TP F LPA+ V+HTVGPVY  +  +  LLR+ + S+L LA     A+VAFPAISCG+Y YP S AA IA+++C++F     + + LQ IEF++F+ +   AW AAA EL
Sbjct:    2 TTRTYLLSPTCAVAVSVGDITRWAGDAVVNAANERMLGGSGVDGAIHKAAGPQLYEACEQVPQVRRSVRCPVGEARITPAFRLPATHVIHTVGPVYRPNSNAPALLRSAYLSALALAHEHHCATVAFPAISCGVYHYPLSAAATIALEACVEFTAA--NPNRLQLIEFVMFTTQTHAAWTAAAAEL 185          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: PSC74698.1 (O-acetyl-ADP-ribose deacetylase MACROD2 [Micractinium conductrix])

HSP 1 Score: 203.0 bits (515), Expect = 9.400e-49
Identity = 107/179 (59.78%), Postives = 125/179 (69.83%), Query Frame = 0
Query:   19 LSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEE 198
            LS  TRL I+ GDLTK    AIVNAANERMLGGGGVDGAIHRAAGP L +ACK VPE+  GVRCP GEAR+TPG +LPA  V+HTVGPVY +   SAPLL   + SSL LA+   +  VAFPAISCG++GYP  ++A IAV++       Q     LQ I F LF Q+   AW+AAA E
Sbjct:    9 LSPTTRLAIRRGDLTKFDGCAIVNAANERMLGGGGVDGAIHRAAGPALLEACKQVPEVRRGVRCPRGEARVTPGGDLPARHVIHTVGPVYSSPATSAPLLEGAYASSLRLANEHKLERVAFPAISCGVFGYPLDESAEIAVRT------SQREAGSLQEIHFFLFGQKELDAWLAAARE 181          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: PNH05962.1 (hypothetical protein TSOC_007710 [Tetrabaena socialis])

HSP 1 Score: 199.9 bits (507), Expect = 8.000e-48
Identity = 95/176 (53.98%), Postives = 130/176 (73.86%), Query Frame = 0
Query:   24 RLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELT 200
            +L +K GD+T+ +  AIVNAANERMLGGGGVDGAIHRAAGP L  AC   PE++PGVRCPTGEAR+T GF LPA  V+HTVGP+Y+ND VSAPLL A ++SSL LA + G+ S++FP IS G+YGYP  KAA++++ +  + +    +   L+ + F++F +E F  +  AA+ ++
Sbjct:   68 KLIVKQGDITRESTDAIVNAANERMLGGGGVDGAIHRAAGPGLVRACAEHPEVSPGVRCPTGEARITGGFNLPARHVIHTVGPIYDNDRVSAPLLAAAYRSSLRLALQHGLTSISFPGISTGVYGYPYDKAAQVSMAAVDEVLAGAGAAGSLREVHFVMFGEELFDEFADAAQRIS 243          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_011399527.1 (Macro domain-containing protein [Auxenochlorella protothecoides] >KFM26589.1 Macro domain-containing protein [Auxenochlorella protothecoides])

HSP 1 Score: 199.5 bits (506), Expect = 1.000e-47
Identity = 104/182 (57.14%), Postives = 125/182 (68.68%), Query Frame = 0
Query:   17 FTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEEL 199
            F LS  TRL I+  DLT     AIVNAANERMLGGGGVDGAIHRAAGP L  AC+AV E+ PGVRCPTGE RLT    LPA  V+HTVGPVY+    SAPLL + +++ L  A   G+AS+AFPAISCG+YGYP  +AARIA+ +C      ++    +Q + F LFS+    AW A A+EL
Sbjct:    4 FKLSPSTRLFIQRADLTTFRGDAIVNAANERMLGGGGVDGAIHRAAGPDLLRACRAVAEVRPGVRCPTGECRLTDAGALPARHVIHTVGPVYDGPATSAPLLASAYRACLCAARDAGLASIAFPAISCGVYGYPLREAARIALNTC------REEAGAVQEVHFFLFSEPTLEAWTAGAKEL 179          
BLAST of NO11G00950 vs. NCBI_GenBank
Match: CBJ28085.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 196.8 bits (499), Expect = 6.800e-47
Identity = 104/185 (56.22%), Postives = 128/185 (69.19%), Query Frame = 0
Query:   13 TTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEE 198
            T R+F L D + L I  GDLTK    A+VNAANE MLGGGGVDGAIHRAAG  L  AC  V   +  +RCPTGEAR+TPGF LPA FV+HTVGPVYEN  VSAPLLR+  ++SL L    GV SVAFPAISCG+YGYPA +AA IA+ + ++F      +  +  IEF+LF ++ +  ++  A E
Sbjct:   41 TRRLFKLKDSSVLAISGGDLTKWKGDAVVNAANEWMLGGGGVDGAIHRAAGRDLLKACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYENKEVSAPLLRSAIKNSLLLCKENGVKSVAFPAISCGVYGYPAGEAAEIAIDTMLEF------SEGIDLIEFVLFGKDTYNPFMKKASE 219          
The following BLAST results are available for this feature:
BLAST of NO11G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856302.12.700e-7269.35hypothetical protein NGA_2111400, partial [Nannoch... [more]
EWM25092.12.700e-7269.35appr-1-p processing enzyme family protein [Nannoch... [more]
PNW80955.17.700e-5156.15hypothetical protein CHLRE_07g336850v5 [Chlamydomo... [more]
XP_005847605.12.900e-5058.95hypothetical protein CHLNCDRAFT_23080 [Chlorella v... [more]
KXZ54768.11.100e-4952.33hypothetical protein GPECTOR_4g838 [Gonium pectora... [more]
OQR98262.15.500e-4954.30hypothetical protein ACHHYP_08929 [Achlya hypogyna... [more]
PSC74698.19.400e-4959.78O-acetyl-ADP-ribose deacetylase MACROD2 [Micractin... [more]
PNH05962.18.000e-4853.98hypothetical protein TSOC_007710 [Tetrabaena socia... [more]
XP_011399527.11.000e-4757.14Macro domain-containing protein [Auxenochlorella p... [more]
CBJ28085.16.800e-4756.22conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002178NSK002178Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00950.1NO11G00950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590966gene_4969Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g47gene5374Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00950.1NO11G00950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00950 ID=NO11G00950|Name=NO11G00950|organism=Nannochloropsis oceanica|type=gene|length=800bp
ATGGTTTTCAGTCGCGGTCAGGTCGCGGCGGCAGCGACGACGCGAGTCTT
TACCTTGAGTGACCAAACACGCCTGCAGATTAAGGTGGGAGATTTGACGA
AAGCGGCCGTTGGCGCCATAGTGAACGCGGCGAACGAGCGGATGTTGGGT
GGAGGCGGGGTGGACGGGGCCATCCATCGGGCAGCAGGGCCTAGGCTTTA
CGACGCGTGCAAGGCAGTGCCCGAAATCACGCCGGGTGTTCGTTGTCCTA
CGGGGGAAGCCCGCCTCACGCCAGGCTTTGAGTTGCCGGCATCTTTCGTC
GTGCATACGGTGGGTCCGGTGTACGAGAATGACTTTGTGTCGGCCCCCTT
GCTTCGGGCCTGTCACCAGAGCTCTCTCGGATTGGCCTCGAGAGAAGGTG
TGGCATCGGTGGCTTTCCCAGCCATTTCATGTGGAATCTACGGGTATCCG
GCATCGAAAGCTGCACGCATTGCTGTCCAAAGTTGCATTGACTTCATCAG
GGAACAGgtgagctgggggaaatgaggcgggataaggcatgcgcttgaag
aatgaagagagcaggaaaaaaatctttcttttgcgaaaagcgtgtgcacg
aatcccgccagtcgaagcagtattgaataaatgaatgatcacatccatat
aaatataaccagGATTCTACATCCCCGCTTCAAAACATCGAGTTTATCCT
ATTCTCACAAGAAAATTTCACTGCCTGGGTCGCTGCCGCGGAGGAGCTCA
CCCAACCTAGCTCCCGCGGCGCAGAAACCTGTCCAACCATCGAAAGCTGA
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protein sequence of NO11G00950.1

>NO11G00950.1-protein ID=NO11G00950.1-protein|Name=NO11G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=215bp
MVFSRGQVAAAATTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLG
GGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFV
VHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYP
ASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQ
PSSRGAETCPTIES*
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Synonyms
Publications