NO11G00930, NO11G00930 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G00930
Unique Name	NO11G00930
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1795
Alignment location	chr11:359371..361165 -

Link to JBrowse

Properties


Property Name	Value
Description	ubiquitin-specific protease 6

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:359371..361165 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
GO:0005515	protein binding
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016579	protein deubiquitination
GO:0009056	catabolic process
GO:0006464	cellular protein modification process

Vocabulary: **INTERPRO**
Term	Definition
IPR029071	Ubiquitin-rel_dom
IPR038765	Papain_like_cys_pep_sf
IPR028889	USP_dom
IPR001394	Peptidase_C19_UCH
IPR000626	Ubiquitin-like

Homology

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BLAST of NO11G00930 vs. NCBI_GenBank
Match: XP_005856297.1 (hypothetical protein NGA_2103000, partial [Nannochloropsis gaditana CCMP526] >EKU20077.1 hypothetical protein NGA_2103000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 868.6 bits (2243), Expect = 9.800e-249
Identity = 431/524 (82.25%), Postives = 461/524 (87.98%), Query Frame = 0

Query:    1 MGPAKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKLIVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFTGTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQSRGHFMQQDADEFLNELLTSLAANLREAYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK--EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYKGTGGVEDEKASA 523
            M P KVQIKWNKQTF++VPLD T  AL FKQHV ELTGVPV RQKLM KG WKLALKDD+DLSKL +KDGA V L+GTADVVKEP EKVVFVEDMAQADQAK+GAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALN +TGTG N+QPFLTNALKDT NLLDG TEPVPPMQFVMLLRQQFPQFAQQSRGH     ADEF+NELLTSLAANLR+AY LP+LEDAGNFVDAL GMEVEDTL+CAE+EAE  V+KRD VRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQS VLGR+AVWNKTTRI+RLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITR +EVD+ILGK   K  + +G +  D                   L+AALAMSMA+SA+A V P PCGPGLP+DFKG+YELFGVVTHKGRTADGGHYMGWVRQKGD+WLVFDDEDVSECKT+EVLQLSGGGDWHMAYLCFYR+KGTGGV DEK S+
Sbjct:   13 MAPTKVQIKWNKQTFSEVPLDTTGTALTFKQHVYELTGVPVPRQKLMCKGAWKLALKDDDDLSKLSIKDGAAVTLIGTADVVKEPVEKVVFVEDMAQADQAKTGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNRYTGTGANEQPFLTNALKDTFNLLDGNTEPVPPMQFVMLLRQQFPQFAQQSRGHXXXXXADEFMNELLTSLAANLRDAYGLPSLEDAGNFVDALFGMEVEDTLSCAESEAEKPVVKRDHVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSEVLGRDAVWNKTTRIARLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITRGREVDDILGKDSKKKGDGLGGDGGDPXXXXXXXXXXXXXXXXXXLQAALAMSMADSADAAVPPAPCGPGLPMDFKGLYELFGVVTHKGRTADGGHYMGWVRQKGDDWLVFDDEDVSECKTAEVLQLSGGGDWHMAYLCFYRFKGTGGVADEKGSS 536

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BLAST of NO11G00930 vs. NCBI_GenBank
Match: EWM25148.1 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Nannochloropsis gaditana])

HSP 1 Score: 868.6 bits (2243), Expect = 9.800e-249
Identity = 431/524 (82.25%), Postives = 461/524 (87.98%), Query Frame = 0

Query:    1 MGPAKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKLIVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFTGTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQSRGHFMQQDADEFLNELLTSLAANLREAYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK--EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYKGTGGVEDEKASA 523
            M P KVQIKWNKQTF++VPLD T  AL FKQHV ELTGVPV RQKLM KG WKLALKDD+DLSKL +KDGA V L+GTADVVKEP EKVVFVEDMAQADQAK+GAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALN +TGTG N+QPFLTNALKDT NLLDG TEPVPPMQFVMLLRQQFPQFAQQSRGH     ADEF+NELLTSLAANLR+AY LP+LEDAGNFVDAL GMEVEDTL+CAE+EAE  V+KRD VRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQS VLGR+AVWNKTTRI+RLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITR +EVD+ILGK   K  + +G +  D                   L+AALAMSMA+SA+A V P PCGPGLP+DFKG+YELFGVVTHKGRTADGGHYMGWVRQKGD+WLVFDDEDVSECKT+EVLQLSGGGDWHMAYLCFYR+KGTGGV DEK S+
Sbjct:    1 MAPTKVQIKWNKQTFSEVPLDTTGTALTFKQHVYELTGVPVPRQKLMCKGAWKLALKDDDDLSKLSIKDGAAVTLIGTADVVKEPVEKVVFVEDMAQADQAKTGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNRYTGTGANEQPFLTNALKDTFNLLDGNTEPVPPMQFVMLLRQQFPQFAQQSRGHXXXXXADEFMNELLTSLAANLRDAYGLPSLEDAGNFVDALFGMEVEDTLSCAESEAEKPVVKRDHVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSEVLGRDAVWNKTTRIARLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITRGREVDDILGKDSKKKGDGLGGDGGDPXXXXXXXXXXXXXXXXXXLQAALAMSMADSADAAVPPAPCGPGLPMDFKGLYELFGVVTHKGRTADGGHYMGWVRQKGDDWLVFDDEDVSECKTAEVLQLSGGGDWHMAYLCFYRFKGTGGVADEKGSS 524

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BLAST of NO11G00930 vs. NCBI_GenBank
Match: ETI47977.1 (hypothetical protein F443_07914 [Phytophthora parasitica P1569])

HSP 1 Score: 502.7 bits (1293), Expect = 1.400e-138
Identity = 268/517 (51.84%), Postives = 349/517 (67.50%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLRE-AYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDKEDMGDESKD-----IAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F DV +D T P   FK  +  LT VPVERQKLM K  WK  LKDD DLS L  + DG  +ML+G+A+VV++P E +VF+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L   L + A  L +L    N VDAL GME+++ L C ET+ EPAV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S V G NAVW KT RI+RLP+YLCVQFMRF+WKATPDS+DHAGVKCK LR ++FP TLD++DFC+  L+  + I R++  ++IL +  DK   G++ +D         +    D   EE+KAAL  A A+SM        SP   G  LP+DF+G YELF ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFQDVVVDKTAPVAVFKAQLYALTSVPVERQKLMSKA-WKGMLKDDVDLSTLDKLVDGTGIMLMGSAEVVQKPKEPIVFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSVDLANNFTTALKDMYGQLDGSVDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQTLTQPAGGLKSLGATNNVVDALFGMEMDEKLECTETDMEPAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSEVKGGNAVWKKTMRINRLPKYLCVQFMRFYWKATPDSRDHAGVKCKMLRPISFPLTLDVYDFCSDELKATMKIARDRNAEKILNEFKDK-PAGEKKEDXXXXXXXXXEDAAMDGLSEEDKAALETARALSMGAK-----SP---GIDLPIDFQGNYELFAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 503

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BLAST of NO11G00930 vs. NCBI_GenBank
Match: ETL94500.1 (hypothetical protein L917_07560 [Phytophthora parasitica])

HSP 1 Score: 501.5 bits (1290), Expect = 3.200e-138
Identity = 267/517 (51.64%), Postives = 349/517 (67.50%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLRE-AYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDKEDMGDESKD-----IAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F DV +D T P   FK  +  LT VPVERQKLM K  WK  LKDD DLS L  + DG  +ML+G+A+VV++P E +VF+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L   L + A  L +L    N VDAL GME+++ L C ET+ EPAV+K+++  KLVCNI       ++ N+L EG+++ LEGTIEK S V G NAVW KT RI+RLP+YLCVQFMRF+WKATPDS+DHAGVKCK LR ++FP TLD++DFC+  L+  + I R++  ++IL +  DK   G++ +D         +    D   EE+KAAL  A A+SM        SP   G  LP+DF+G YELF ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFQDVVVDKTAPVAVFKAQLYALTSVPVERQKLMSKA-WKGMLKDDVDLSTLDKLVDGTGIMLMGSAEVVQKPKEPIVFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLANNFTTALKDMYGQLDGSVDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQTLTQPAGGLKSLGATNNVVDALFGMEMDEKLECTETDMEPAVVKKEKALKLVCNI------TIETNHLSEGIRIGLEGTIEKHSEVKGGNAVWKKTMRINRLPKYLCVQFMRFYWKATPDSRDHAGVKCKMLRPISFPLTLDVYDFCSDELKATMKIARDRNAEKILNEFKDK-PAGEKKEDXXXXXXXXXEDAAMDGLSEEDKAALETARALSMGAK-----SP---GIDLPIDFQGNYELFAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 503

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BLAST of NO11G00930 vs. NCBI_GenBank
Match: XP_008904641.1 (hypothetical protein PPTG_10896 [Phytophthora parasitica INRA-310] >ETK87906.1 hypothetical protein L915_07747 [Phytophthora parasitica] >ETL41326.1 hypothetical protein L916_07676 [Phytophthora parasitica] >ETN10204.1 hypothetical protein PPTG_10896 [Phytophthora parasitica INRA-310] >ETO76698.1 hypothetical protein F444_07963 [Phytophthora parasitica P1976] >ETP17780.1 hypothetical protein F441_07886 [Phytophthora parasitica CJ01A1] >KUF76952.1 Ubiquitin carboxyl-terminal hydrolase [Phytophthora nicotianae])

HSP 1 Score: 498.4 bits (1282), Expect = 2.700e-137
Identity = 266/516 (51.55%), Postives = 344/516 (66.67%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLRE-AYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK----EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F DV +D T P   FK  +  LT VPVERQKLM K  WK  LKDD DLS L  + DG  +ML+G+A+VV++P E +VF+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L   L + A  L +L    N VDAL GME+++ L C ET+ EPAV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S V G NAVW KT RI+RLP+YLCVQFMRF+WKATPDS+DHAGVKCK LR ++FP TLD++DFC+  L+  + I R++  ++IL +  DK    +                 D   EE+KAAL  A A+SM        SP   G  LP+DF+G YELF ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFQDVVVDKTAPVAVFKAQLYALTSVPVERQKLMSKA-WKGMLKDDVDLSTLDKLVDGTGIMLMGSAEVVQKPKEPIVFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLANNFTTALKDMYGQLDGSVDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQTLTQPAGGLKSLGATNNVVDALFGMEMDEKLECTETDMEPAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSEVKGGNAVWKKTMRINRLPKYLCVQFMRFYWKATPDSRDHAGVKCKMLRPISFPLTLDVYDFCSDELKATMKIARDRNAEKILNEFKDKPAGEKXXXXXXXXXXXXXXXAMDGLSEEDKAALETARALSMGAK-----SP---GIDLPIDFQGNYELFAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 503

[Close]

BLAST of NO11G00930 vs. NCBI_GenBank
Match: ETP45818.1 (hypothetical protein F442_07853 [Phytophthora parasitica P10297])

HSP 1 Score: 498.4 bits (1282), Expect = 2.700e-137
Identity = 266/516 (51.55%), Postives = 344/516 (66.67%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLRE-AYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK----EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F DV +D T P   FK  +  LT VPVERQKLM K  WK  LKDD DLS L  + DG  +ML+G+A+VV++P E +VF+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L   L + A  L +L    N VDAL GME+++ L C ET+ EPAV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S V G NAVW KT RI+RLP+YLCVQFMRF+WKATPDS+DHAGVKCK LR ++FP TLD++DFC+  L+  + I R++  ++IL +  DK    +                 D   EE+KAAL  A A+SM        SP   G  LP+DF+G YELF ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFQDVVVDKTAPVAVFKAQLYALTSVPVERQKLMSKA-WKGMLKDDVDLSTLDKLVDGTGIMLMGSAEVVQKPKEPIVFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLANNFTTALKDMYGQLDGSVDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQTLTQPAGGLKSLGATNNVVDALFGMEMDEKLECTETDMEPAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSEVKGGNAVWKKTMRINRLPKYLCVQFMRFYWKATPDSRDHAGVKCKMLRPISFPLTLDVYDFCSDELKATMKIARDRNAEKILNEFKDKPAGEKXXXXXXXXXXXXXXXTMDGLSEEDKAALETARALSMGAK-----SP---GIDLPIDFQGNYELFAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 503

[Close]

BLAST of NO11G00930 vs. NCBI_GenBank
Match: ETM47721.1 (hypothetical protein L914_07640 [Phytophthora parasitica])

HSP 1 Score: 496.5 bits (1277), Expect = 1.000e-136
Identity = 265/516 (51.36%), Postives = 344/516 (66.67%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLRE-AYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK----EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F DV +D T P   FK  +  LT VPVERQKLM K  WK  LKDD DLS L  + DG  +ML+G+A+VV++P E +VF+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L   L + A  L +L    N VDAL GME+++ L C ET+ EPAV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S V G +AVW KT RI+RLP+YLCVQFMRF+WKATPDS+DHAGVKCK LR ++FP TLD++DFC+  L+  + I R++  ++IL +  DK    +                 D   EE+KAAL  A A+SM        SP   G  LP+DF+G YELF ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFQDVVVDKTAPVAVFKAQLYALTSVPVERQKLMSKA-WKGMLKDDVDLSTLDKLVDGTGIMLMGSAEVVQKPKEPIVFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLANNFTTALKDMYGQLDGSVDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQTLTQPAGGLKSLGATNNVVDALFGMEMDEKLECTETDMEPAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSEVKGGDAVWKKTMRINRLPKYLCVQFMRFYWKATPDSRDHAGVKCKMLRPISFPLTLDVYDFCSDELKATMKIARDRNAEKILNEFKDKPAGEKXXXXXXXXXXXXXXXAMDGLSEEDKAALETARALSMGAK-----SP---GIDLPIDFQGNYELFAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 503

[Close]

BLAST of NO11G00930 vs. NCBI_GenBank
Match: OWZ17261.1 (Ubiquitin carboxyl-terminal hydrolase [Phytophthora megakarya])

HSP 1 Score: 495.4 bits (1274), Expect = 2.300e-136
Identity = 258/515 (50.10%), Postives = 346/515 (67.18%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLREAYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK----EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F+DV +D   P   FK  + +LT VP+ERQKLM K  WK  LKDD DL+ L  + DG  +ML+G+A+VV++P E +VF+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T+ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L  +L +   L +L    N VDAL G+E+++ + C E+E E AV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S VLGRNAVW KT RI+RLP+YLCVQFMRF+WKATP+S+DH GVKCK LR ++FP TLD++DFC+  L+  + I+R++  ++IL +  DK                      D   EE+KAAL  A A+SM        SP   G  LP+DF+G YEL+ ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFSDVVVDKAAPVAVFKAQLYDLTSVPMERQKLMSKA-WKGMLKDDVDLASLEKLVDGTGIMLMGSAEVVQKPKEPIVFIEDMTTQDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLANNFTSALKDMYGQLDGSLDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQSLTQPAGLKSLGPTNNVVDALFGLEMDEKIECTESEMETAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSDVLGRNAVWKKTMRINRLPKYLCVQFMRFYWKATPESRDHTGVKCKMLRPISFPLTLDVYDFCSDELKSTMKISRDRNAEKILNEFKDKPAGEXXXXXXXXXXXXXXXXAMDGLSEEDKAALETARALSMGAK-----SP---GIELPIDFQGNYELYAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 502

[Close]

BLAST of NO11G00930 vs. NCBI_GenBank
Match: POM61670.1 (Ubiquitin carboxyl-terminal hydrolase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 488.8 bits (1257), Expect = 2.100e-134
Identity = 259/516 (50.19%), Postives = 344/516 (66.67%), Query Frame = 0

Query:    4 AKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANL-REAYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDK----EDMGDESKDIAVADAGVADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            AKV +KW KQ F D+ +D   P   FK  + +LT VPVERQKLM K  WK  LKDD DLS L  + DG  VML+G+A+VV++P E ++F+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T ALKD  + LD + + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L  +L  +L R A  L +L    N VDAL G+E+++ L C E++ E AV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S VL RNAVW KT RI+RLP+YLCVQFMRF+WKATP+S+DH GVKCK LR ++FP TLD++DFC+  L+  + I+R++  ++IL +  DK    +                 D   EE+KAAL  A A+SM        SP   G  LP+DF+G YEL+ ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:    3 AKVSVKWGKQVFNDIVVDKAAPVAVFKAQLYDLTSVPVERQKLMSKA-WKGMLKDDVDLSTLDKLVDGTGVMLMGSAEVVQKPKEPIIFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLANNFTTALKDMYSQLDNSVDNITPSMFVSVLRRAYPQFAQQAPRTGGYMQQDSEEFLSTLFATLQQSLTRPAGGLKSLGPTSNVVDALFGLEMDEKLECTESDMEVAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSDVLNRNAVWKKTMRINRLPKYLCVQFMRFYWKATPESRDHTGVKCKMLRPISFPLTLDVYDFCSDELKATMKISRDRNAEKILNEFKDKPAGEKXXXXXXXXXXXXXXXAMDGLSEEDKAALETARALSMGAK-----SP---GIELPIDFQGNYELYAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 503

[Close]

BLAST of NO11G00930 vs. NCBI_GenBank
Match: XP_002908898.1 (ubiquitin carboxyl-terminal hydrolase, putative [Phytophthora infestans T30-4] >EEY57712.1 ubiquitin carboxyl-terminal hydrolase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 488.4 bits (1256), Expect = 2.800e-134
Identity = 259/515 (50.29%), Postives = 342/515 (66.41%), Query Frame = 0

Query:    5 KVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKGLWKLALKDDEDLSKL-IVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQAKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFT-GTGTNQQPFLTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQS--RGHFMQQDADEFLNELLTSLAANLRE-AYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEPAVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRNAVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPETLDMFDFCNKTLQDRLMITREKEVDEILGKGLDKEDMGDESKDIAVADAGVADVE----DEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGVVTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWHMAYLCFYRYK 511
            KV +KW KQ F DV +D + P    K  +  LT VPVERQKLM K  WK  LKDD DL+ L  + DG  +ML+G+A+VV++P E ++F+EDM   D A +G + PAGL NLGNTCY+N+TLQCLR V ELR+AL     G   +     T+ALKD    LDG+ + + P  FV +LR+ +PQFAQQ+   G +MQQD++EFL+ L ++L   L + A  L TL    N VDAL G+E+++ L C ET+ EPAV+K+++  KLVCNI       ++ N+L EG+K+ LEGTIEK S V G NAVW KT RI+RLP+YLCVQFMRF+WKATP+S+DHAGVKCK LR ++FP TLD++DFC+  L+  + I+R++  ++IL +  DK                          EE+KAAL  A A+SM        SP   G  LP+DF+G YELF ++THKGR+AD GHYM WVR +GD+W  +DD+DVS CKT ++++L GGGDWHMAYL FYR K
Sbjct:  305 KVSVKWGKQVFQDVVVDKSAPVAVLKAQLYTLTSVPVERQKLMSKA-WKGMLKDDVDLATLDKLVDGTGIMLMGSAEVVQKPKEPIIFIEDMTTKDIAATGTVYPAGLVNLGNTCYMNATLQCLRPVKELREALKAQPGGVSADLTNNFTSALKDMYGQLDGSLDSITPSMFVSVLRRAYPQFAQQAPRSGGYMQQDSEEFLSTLFSTLQQTLTQPAGGLKTLGPVNNVVDALFGLEMDEKLECTETDMEPAVVKKEKALKLVCNI------TIETNHLSEGIKIGLEGTIEKHSEVKGGNAVWKKTMRINRLPKYLCVQFMRFYWKATPESRDHAGVKCKMLRPISFPLTLDVYDFCSDELKATMKISRDRNAEKILNEFKDKXXXXXXXXXXXXXXXXXXXXXXXGLSEEDKAALETARALSMGAK-----SP---GIDLPIDFQGNYELFAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAK 804

The following BLAST results are available for this feature:

BLAST of NO11G00930 vs. NCBI_GenBank

BLAST of NO11G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005856297.1	9.800e-249	82.25	hypothetical protein NGA_2103000, partial [Nannoch...	[more]
EWM25148.1	9.800e-249	82.25	Peptidase C19, ubiquitin carboxyl-terminal hydrola...	[more]
ETI47977.1	1.400e-138	51.84	hypothetical protein F443_07914 [Phytophthora para...	[more]
ETL94500.1	3.200e-138	51.64	hypothetical protein L917_07560 [Phytophthora para...	[more]
XP_008904641.1	2.700e-137	51.55	hypothetical protein PPTG_10896 [Phytophthora para...	[more]
ETP45818.1	2.700e-137	51.55	hypothetical protein F442_07853 [Phytophthora para...	[more]
ETM47721.1	1.000e-136	51.36	hypothetical protein L914_07640 [Phytophthora para...	[more]
OWZ17261.1	2.300e-136	50.10	Ubiquitin carboxyl-terminal hydrolase [Phytophthor...	[more]
POM61670.1	2.100e-134	50.19	Ubiquitin carboxyl-terminal hydrolase [Phytophthor...	[more]
XP_002908898.1	2.800e-134	50.29	ubiquitin carboxyl-terminal hydrolase, putative [P...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL115	nonsL115	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR010	ncniR010	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR018	ngnoR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002180	NSK002180	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO11G00930.1	NO11G00930.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|590959	gene_4967	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100016g49	gene5372	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO11G00930.1	NO11G00930.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO11G00930 ID=NO11G00930|Name=NO11G00930|organism=Nannochloropsis oceanica|type=gene|length=1795bp
CACAACCAGTACTCCAAGCCCCTACAGTCAAACACGCACAATGGGGCCTG
CCAAGGTACAGATTAAGTGGAACAAACAGACTTTTACGGATGTCCCATTG
GACATCACTCAGCCCGCCTTGGCTTTCAAACAGCATGTCTCCGAGCTGAC
AGGCGTGCCCGTGGAGCGGCAAAAGCTCATGGGAAAGGGTTTGTGGAAGC
TAGCCCTCAAAGATGACGAGGACCTTTCCAAGCTCATCGTCAAGGACGGA
GCGGTAGTTATGCTGGTGGGAACGGCAGACGTGGTCAAAGAACCCGCGGA
GAAGGTAGTTTTTGTGGAGGACATGGCACAGGCCGATCAGGCCAAGTCTG
GTGCAATTCTCCCCGCGGGCCTGCGCAATCTCGGCAACACTTGCTATCTC
AACTCTACACTGCAGTGCTTGCGATACGTGCCGGAGCTCCGACAAGCTCT
GAACCTGTTCACGGGCACGGGCACCAACCAACAACCCTTCTTGACGAACG
CCCTCAAGGACACGCTCAACCTGCTGGACGGTACTACCGAGCCCGTACCG
CCGATGCAGTTCGTCATGCTTCTGCGCCAGCAATTTCCGCAATTCGCCCA
GCAATCTCGGGGCCACTTTATGCAGCAGGATGCGGATGAGTTTTTGAATG
AGCTGCTAACCTCGCTGGCCGCTAATCTGCGCGAGGCGTACGTGCTGCCC
ACGCTGGAGGACGCGGGAAACTTCGTGGACGCTCTGCTGGGCATGGAGGT
GGAGGACACCCTGACCTGTGCTGAGACGGAGGCAGAGCCGGCTGTGCTTA
AACGCGACCAAGTGCGTAAGCTGGTGTGCAACATTCAGGGCGGTGCGGGC
AGCGACGTGAAGATAAACTACCTGCATGAGGGCGTCAAGCTAGCGCTGGA
GGGCACCATCGAGAAGCAGAGCGCGGTGCTGGGCCGGAACGCGGTCTGGA
ACAAGACAACGCGCATTTCACGCTTGCCCCGCTACCTGTGCGTACAGTTT
ATGCGCTTCTTCTGGAAGGCTACTCCGGACAGCCAGGACCACGCCGGTGT
CAAATGCAAGTCCCTTCGCACCGTTACCTTTCCCGAGACCCTGGACATGT
TCGACTTCTGCAACAAGACGCTGCAGGATCGGCTTATGATCACGCGTGAG
AAGGAAGTAGACGAAATCTTGGGTAAGGGTCTGGATAAGGAGGACATGGG
CGATGAAAGCAAGGACATTGCCGTGGCCGACGCTGGGGTTGCCGACGTTG
AGGACGAGGAGGAGAAGGCCGCGCTGCGAGCGGCGCTAGCCATGTCCATG
GCGGAGTCGGCGAACGCGGTTGTGTCTCCTACACCGTGCGGACCCGGACT
GCCTCTGGATTTCAAGGGCATTTACGAGCTATTCGGCGTGGTGACGCACA
AGGGTCGGACAGCAGACGGCGGACACTACATGGGCTGGGTCCGGCAGAAG
GGCGATAACTGGCTAGTCTTCGACGACGAGGACGTGTCGGAGTGCAAGAC
GTCTGAAGTACTACAGCTCTCAGGGGGCGGGGACTGGCATATGGCGTACC
TCTGCTTCTATCGCTACAAGGGCACAGGAGGTGTCGAAGACGAGAAGGCC
TCTGCGGCAGCGGCTGAGAAGTGAAACACTTGTAAGGGCGACGGAAGCTT
GGAGAGCGAAATATTCGAGAACTATGGCAGGAACTACAGTTTCAAAAGCA
GGCCGCTGTTTATGTAGGATACTTGAATGGAAAACGGCTGAAATAGGTCA
GGACCAGCACGCGAAGAGAAGGAAAGTTACGATAAACGAATGAGA

protein sequence of NO11G00930.1

>NO11G00930.1-protein ID=NO11G00930.1-protein|Name=NO11G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=528bp
MGPAKVQIKWNKQTFTDVPLDITQPALAFKQHVSELTGVPVERQKLMGKG
LWKLALKDDEDLSKLIVKDGAVVMLVGTADVVKEPAEKVVFVEDMAQADQ
AKSGAILPAGLRNLGNTCYLNSTLQCLRYVPELRQALNLFTGTGTNQQPF
LTNALKDTLNLLDGTTEPVPPMQFVMLLRQQFPQFAQQSRGHFMQQDADE
FLNELLTSLAANLREAYVLPTLEDAGNFVDALLGMEVEDTLTCAETEAEP
AVLKRDQVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSAVLGRN
AVWNKTTRISRLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFPET
LDMFDFCNKTLQDRLMITREKEVDEILGKGLDKEDMGDESKDIAVADAGV
ADVEDEEEKAALRAALAMSMAESANAVVSPTPCGPGLPLDFKGIYELFGV
VTHKGRTADGGHYMGWVRQKGDNWLVFDDEDVSECKTSEVLQLSGGGDWH
MAYLCFYRYKGTGGVEDEKASAAAAEK*

Synonyms

Publications