NO11G00830, NO11G00830 (gene) Nannochloropsis oceanica

Overview
NameNO11G00830
Unique NameNO11G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2862
Alignment locationchr11:329067..331928 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeroxisome membrane anchor protein Pex14p
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:329067..331928 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO11G00830 vs. NCBI_GenBank
Match: EWM25114.1 (Peroxisome membrane anchor protein Pex14p [Nannochloropsis gaditana])

HSP 1 Score: 215.7 bits (548), Expect = 5.500e-52
Identity = 234/770 (30.39%), Postives = 289/770 (37.53%), Query Frame = 0 
Query:    1 MNTGRAVADENAEDDCASSFGGGEDSTALEFLTVPIVAQMHVSSRITFLESKGFNETEISAALHLTDEEFQRNPHIMHRSPQTGPGAAVGEGREGDMTTKEVAEGSHAGDQSWSPSSPSANS----WSHLMDGGTQHTAPWGESLALQCQAQSQTLSLVPAAGFIPSRSLRPPALRGPVQDDRGIGVLSTMMAAVEVEKLTLQSRNSFRAEIGGCRFP-HQHPLQSLSQQHQXXXXTSRPVSPSVPAQHPCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHAYGSRSVPRGRIHYPHHPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQVGRQECHSGCEGLSSPYFIPPQLHPHHQEHQISLGGY------YDGSRGIPAADIGFPWHARRRETRCTHKIYNIGEPDYFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHCSAGGEQLEGASSSPTLEAGGAG------GGKEKVVPNIYPSWEAATHNPVTNKGSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELGLYMADIFYETETGPTMMALFDKLICRVAERCPSRLQEFREEALKSLAQLMQACEEREEQQERGREALKTSGQRGKPVRNAAKRLGKSRTEARKLGAMIAHYRS 754
            MN GR V D +  +  A    G E  TALEFLTVP VA+  +SSRI FL+SKGF ETEIS AL L  E      +    SP T   A V       +  K  A G  A   +W+ S  SA++     SH  D  T            Q  A  Q   +   + F PS++ R   LRG  QD   +G +S MMAA+ V K ++Q    FRA+  G      +H +     Q +    +S   S       P                                                                                                 A  S  VP G      +P                                                                           G +   S   G+ S  ++    H H+ ++  S   +      + G+  IP  + G+P +AR  E R  HK  + G  +                                                       H  A G   +   SS    +G A        GK+K   + +P+ + +THN +T++GSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELGLYMADIFYETETGPTMMAL+DKL  RV+ERCP  L  FREEAL+S                        SGQRGKPVRNAAKRLGKSRTE RKLGAMIAHYRS
Sbjct:    1 MNPGRGVNDASTYNK-ARLCNGSEGVTALEFLTVPNVAKTPISSRIAFLKSKGFTETEISVALRLAGEVMCSGHNT--SSPATRQPACVD---RSIVDVKSEAWGPVARGHAWNSSFSSASARRTFQSHFGDSATTRVG----FSDRQAHAHHQN-GIFSGSAFPPSQAPR-GGLRGCGQD---VGEVSDMMAAINVAKSSMQGGAFFRAKSRGASHGLSEHYMPPRHAQGRLPTASSSSFSSRWSHTTP----------------------------------------------------------GGLQQGDPPYRLIEATESTEDAQGAGLAPPQRLFQSRPDATFSTGVPPGPSQNSRNP-----------------------------------------FHQDQSPPLFDITHQKQLHEHRPPTCAMPLAEMRGLKHDDSARSGIQSQDYLQAPAHNHNYQYYSSTSNFRPPNIAHCGAGDIPVTESGYPGYARHFEARRYHKTSSGGHAE----------------------------------------VPRGSEGGVMWRVRGHSFADGVDCDFPPSS----SGRADVQWQEQHGKDKRESSNHPTPDTSTHNTITSQGSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELGLYMADIFYETETGPTMMALYDKLERRVSERCPGHLTTFREEALQSXXXXXXXXXXXXXXXXXXXXXXXXSGQRGKPVRNAAKRLGKSRTEGRKLGAMIAHYRS 612
The following BLAST results are available for this feature:
BLAST of NO11G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25114.15.500e-5230.39Peroxisome membrane anchor protein Pex14p [Nannoch... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002188NSK002188Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00830.1NO11G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590921gene_4956Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g57gene5365Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00830.1NO11G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00830 ID=NO11G00830|Name=NO11G00830|organism=Nannochloropsis oceanica|type=gene|length=2862bp
AGGAGACAGGTAGGAGAACTTGGCGCGATCTCTGACAGGATCGGTGCAGG
ACCAAAGGCAAGAGGCCAACGTGCGAAGCAGGCGGATCGACACACACGAA
ATATCAACGGCTTGGCTCCGGGCGGGTCACGATTGCAGGGACACTGTGGT
GTGGCAATGAACACAGGAAGGGCCGTAGCGGACGAAAATGCAGAGGATGA
TTGCGCCAGCTCGTTCGGGGGTGGGGAAGACTCGACGGCCCTGGAATTTC
TGACGGTTCCTATCGTGGCCCAGATGCACGTGTCCTCTCGCATCACCTTC
CTCGAGAGCAAGGGCTTCAACGAGACGGAGATCAGCGCTGCCTTGCACCT
GACCGACGAGGAATTTCAAAGAAATCCACACATAATGCATCGCAGCCCAC
AGACGGGCCCGGGAGCAGCAGTGGGAGAAGGACGAGAAGGAGACATGACG
ACAAAAGAAGTAGCTGAGGGGTCGCACGCAGGCGACCAGTCCTGGAGCCC
GTCCAGTCCCAGCGCTAATTCGTGGTCGCATCTGATGGATGGGGGAACGC
AACATACCGCGCCTTGGGGGGAGTCGTTGGCGCTGCAATGTCAGGCTCAA
TCCCAGACGCTGTCCCTCGTCCCTGCTGCAGGCTTCATCCCTTCGCGCTC
GCTGCGGCCGCCAGCTTTGAGAGGCCCGGTCCAAGATGACCGAGGCATAG
GTGTGTTGTCGACCATGATGGCGGCCGTAGAGGTGGAGAAGCTGACGTTG
CAGAGCAGAAATTCTTTTCGGGCGGAGATTGGGGGATGCCGTTTCCCGCA
TCAACACCCGCTGCAATCATTGTCGCAGCAGCATCAGCAGCAGCAAGAGA
CTTCACGCCCAGTGTCTCCCTCCGTCCCTGCACAGCACCCTTGCAATCAG
CAGCAGCAACAGAAAATGCAGCAGCTACAGCAACAACAACAGAAAATGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGA
AAATGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGTGGAA
ATGCAGCAGCATCAGCAGCATCAGCAGCAAGTGCAGCAAATGCAGCACGG
TGGAGGAGGACAGCGAGGATTCACCTTGTACCCTCCCTACCACCACCACC
ACCACCTCCCGTCCCATCATCGTCACAAACACGCGTACGGCTCTCGCAGC
GTGCCCCGAGGTCGCATACATTACCCCCACCATCCCCAGCAGACGCAGCG
GCAGGACCAACAACGCCTCCTCTTCCACCTGAAACGTCAACAACAACAAC
AACAACAACAACAACAAGAACAAGAACAAGAACAAGAACAGCAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACCACAACAACAACAACAACCACTACTCCAACAACAACCGCTGGCTG
TGCCGCAAGTAGGAAGGCAGGAATGTCACAGCGGCTGTGAAGGTTTATCT
TCGCCTTACTTCATTCCGCCTCAGCTGCACCCCCACCACCAAGAGCACCA
GATCTCGTTGGGTGGATACTATGATGGATCAAGGGGCATTCCGGCGGCGG
ATATTGGCTTTCCATGGgtatgttgtgatcgttggtcgaatgggagtaaa
ggtgaagaagaaaggagggcggggagaggagaagaatgaattctaccatg
tgtaaatggcatggaatgggattatccctttgaaaacatgcataactcac
tttctctttctattcatgcgtacatctgatcacagCATGCCCGTCGGCGT
GAGACGCGCTGTACTCACAAAATTTACAACATCGGAGAGCCCGACTATTT
CTACAGGTATGACACAAGCAGCAGCACAAGCAGCAGCAGCAGTAGCAGCA
AGAACAATAGTAATTTCAACCCCGAGCCTACCAGCACCAGCAGTACCCGC
ACCCGCAGCAGCAGCACCCGCAGCAGCAGCAGCAGCAGCAGCACCAGCAG
GCAGTACAGGCATTGTTCAGCGGGCGGAGAGCAGCTGGAAGGTGCCAGCA
GCAGCCCAACGCTGGAGGCAGGCGGGGCTGGTGGTGGGAAGGAGAAGGTC
GTGCCCAATATCTACCCGTCTTGGGAGGCAGCGACACACAACCCGGTCAC
CAATAAGGGGAGTGACGATGCCTTGCCCTGGTTTAAGACCATCGCCAGTG
GTCGCGTCCAGAAGCATTTGATGCGGTTCGTGAACAATTTCATCTCCCAG
CAGGACCTGGAGGACGAGTTGGGGTTGTATATGGCCGACATTTTCTACGA
GACAGAGACCGGGCCGACCATGATGGCACTCTTCGACAAGCTAATATGTC
GCGTAGCTGAGCGTTGCCCCAGCCGCCTTCAGGAATTTCGGGAGGAAGCC
TTAAAGAGCCTGGCGCAGCTCATGCAGGCTTGCGAAGAGCGGGAGGAGCA
GCAGGAGCGGGGTCGTGAGGCGCTCAAGACTTCGGGTCAGCGCGGTAAGC
CTGTGCGAAACGCTGCCAAGCGCTTGGGGAAGTCGCGCACCGAGGCTCGT
AAACTTGGTGCTATGATTGCTCACTACCGATCCTTGCCTAGCGAGGATGG
GGAAGACGAGAAGGGAGGACAGATTGGTGGGACAGGGGAGGATGAGATGA
GTGTGCTGAAAGGGCTTCCATTTAACCCTGTGCCAATGATGGGCAGCAAC
CTCAACGAGGACAAGGGCGGACAGCAAGACGGAGCCGGGGAGGCGAAGGG
GCGGCAGGCCCGTTTGCACTTTTTGGAGGACGAAGAGGACCAGAATGAGG
AGGAGGACGTGTGGGATGACGACTATGATTTGGAGGAGGTGGAGGACGAG
GAGAAGAAATAA
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protein sequence of NO11G00830.1

>NO11G00830.1-protein ID=NO11G00830.1-protein|Name=NO11G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=846bp
MNTGRAVADENAEDDCASSFGGGEDSTALEFLTVPIVAQMHVSSRITFLE
SKGFNETEISAALHLTDEEFQRNPHIMHRSPQTGPGAAVGEGREGDMTTK
EVAEGSHAGDQSWSPSSPSANSWSHLMDGGTQHTAPWGESLALQCQAQSQ
TLSLVPAAGFIPSRSLRPPALRGPVQDDRGIGVLSTMMAAVEVEKLTLQS
RNSFRAEIGGCRFPHQHPLQSLSQQHQQQQETSRPVSPSVPAQHPCNQQQ
QQKMQQLQQQQQKMQQQQQQQQQQQQQQQQQKMQQQEEEEEEEEKEVEMQ
QHQQHQQQVQQMQHGGGGQRGFTLYPPYHHHHHLPSHHRHKHAYGSRSVP
RGRIHYPHHPQQTQRQDQQRLLFHLKRQQQQQQQQQQEQEQEQEQQQQQQ
QQQQQQQQQQQQQQQQPQQQQQPLLQQQPLAVPQVGRQECHSGCEGLSSP
YFIPPQLHPHHQEHQISLGGYYDGSRGIPAADIGFPWHARRRETRCTHKI
YNIGEPDYFYRYDTSSSTSSSSSSSKNNSNFNPEPTSTSSTRTRSSSTRS
SSSSSSTSRQYRHCSAGGEQLEGASSSPTLEAGGAGGGKEKVVPNIYPSW
EAATHNPVTNKGSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELG
LYMADIFYETETGPTMMALFDKLICRVAERCPSRLQEFREEALKSLAQLM
QACEEREEQQERGREALKTSGQRGKPVRNAAKRLGKSRTEARKLGAMIAH
YRSLPSEDGEDEKGGQIGGTGEDEMSVLKGLPFNPVPMMGSNLNEDKGGQ
QDGAGEAKGRQARLHFLEDEEDQNEEEDVWDDDYDLEEVEDEEKK*
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Synonyms
Publications