NO11G00470, NO11G00470 (gene) Nannochloropsis oceanica

Overview
NameNO11G00470
Unique NameNO11G00470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1955
Alignment locationchr11:212414..214368 +

Link to JBrowse

Properties
Property NameValue
DescriptionMembrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:212414..214368 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005892acetylcholine-gated channel complex
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005892acetylcholine-gated channel complex
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR033438MOLO1
IPR018957Znf_C3HC4_RING-type
IPR001841Znf_RING
Homology
BLAST of NO11G00470 vs. NCBI_GenBank
Match: KXZ41529.1 (hypothetical protein GPECTOR_413g260 [Gonium pectorale])

HSP 1 Score: 141.7 bits (356), Expect = 5.800e-30
Identity = 135/377 (35.81%), Postives = 186/377 (49.34%), Query Frame = 0
Query:   52 WSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDVVEEA-EGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDG---------GVLMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDFGXXXXXXXXXXXXXXXXXGLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSILGCGHAYCRSCLLMALERERVPRCPICRRTLDE 419
            W+   +PNP  + +        +CG   V     TS++CDPD ++S + A  V  ++  I   L     G  G         +   +G QV VAL+ ++K+  H  +E A +  A  LH  WGVGD  C NGVLL +SR DR +YIS G G   LLT D +  ++ DV+ LLR G +D          G+ +A  +V    D G     +      V  L   A  S A W +R++   RR Y D + KLE+++R+Q+ L+    A S+    SCP+CLEDF      XXXXXXXXXXXX    XXXXXXXXXX                             +L CGHA+C  C+   L++++V  CPICRR +DE
Sbjct:   22 WTPRNYPNPMRDVE--------TCGRRGV-----TSWVCDPDGVISYESANVVEGLIKKIHAGLPPFSLGPCG---------RAGPQGFQVAVALMFRMKKDGHPDIESATKAMATGLHDRWGVGDRRCDNGVLLLVSRSDRQLYISTGAGATQLLTYDVLGDILEDVRPLLRKGSYDDAIERAVMDIGLALAGRRVEPQPDRGNSFSKDDGIALGVFALAAGAMFSAAFWNDRRR---RRRYNDCRSKLEKLKRDQAALR----AGSYNP-TSCPVCLEDFTPEPGAXXXXXXXXXXXXXXXXXXXXXXXXXXPL---------------------------VLPCGHAFCEPCISKWLDQKKV-TCPICRRPIDE 340          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: XP_015761989.1 (PREDICTED: uncharacterized protein LOC107341078 [Acropora digitifera])

HSP 1 Score: 138.7 bits (348), Expect = 4.900e-29
Identity = 110/393 (27.99%), Postives = 179/393 (45.55%), Query Frame = 0
Query:   26 LLLLALSPSFLLLTHAQPDTPGYREGWSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLK-RTKHDVVEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDFGXXXXXXXXXXXXXXXXXGLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSILGCGHAYCRSCLLMALERERVPRCPICRRTLD 418
            ++ LA+   FLL+   Q +     E W+  +FPNPT N +        +CG      +   S++CDP+++LS + A  + E+L ++R      C        +G+ P      G Q+GVA++++++  +   V + AE FA+ LH  WGVG+  C +G +L +S  DR +Y+S G+G   +LTDD+ID ++ ++K  LR  ++D  V +AV K+ E V  G         G ++  LV++  +  A++   ++  D    E+   KL+RI+ E+ R +      S+E  +SCPICLE+F                                                             +L CGH YC  CL   L+      CPICRR+ D
Sbjct:    6 VVFLAVCGIFLLVQRGQSN-----EQWAKEEFPNPTINLE--------ACG-----RRGKVSWICDPESILSYESANNIEELLYSVRKNTNSGC-------SKGENP------GFQIGVAVLNRMRSNSDESVAKTAEKFAKHLHDSWGVGNAGCDDGAVLLISTDDRQVYMSTGRGATKVLTDDQIDLIIEEMKPHLRDKNYDKSVEVAVTKMGE-VFSGKVLESSLDYGLILFFLVIVTGVGLAIYLVHRRDQD---IENCTLKLQRIQDERDRAK-----HSYE-TKSCPICLEEF------------------------------------------------------EPETPTKLLACGHKYCEPCLTKWLQEHST--CPICRRSSD 301          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: XP_020603526.1 (uncharacterized protein LOC110042486 [Orbicella faveolata])

HSP 1 Score: 133.7 bits (335), Expect = 1.600e-27
Identity = 107/367 (29.16%), Postives = 160/367 (43.60%), Query Frame = 0
Query:   52 WSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDVVEE-AEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDFGXXXXXXXXXXXXXXXXXGLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSILGCGHAYCRSCLLMALERERVPRCPICRRTLD 418
            W    FPNP        T    SCG      +   S++CDPD +L+ + A  V E+L ++       C             +  ++ G Q+GVA++ K++R   + VEE AE F + LH  WGVG   C +G +L LS +DR +Y+S GK    LL+DD+ID ++ ++K  LRG D+D  V +AV ++ E V  G         G ++    +IA +   ++   Q+  +R   E   RKL+RI+ E+ R    +  +S+E  +SCPICLE+F                                                             +L CGH YC  CL   LE      CPICR++ D
Sbjct:   30 WLKEDFPNP--------TKDLGSCG-----RRGEVSWICDPDKVLNYETANKVEELLYSVGKNTASGC-------------SSDKKPGFQIGVAVLKKMRRIPGESVEETAEKFTKHLHDSWGVGHAGCDDGAMLLLSILDRQVYVSTGKKAMELLSDDQIDIIIEEMKVYLRGKDYDKSVELAVVRMGE-VFSGKVLERPFDYGLIIFCAFLIAVVGAGLYIGHQQEQER---EKCTRKLKRIQEERDRANQSQ--KSYES-KSCPICLEEF------------------------------------------------------QPETKTRLLACGHKYCEPCLTKWLEDHAT--CPICRQSAD 307          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: PNW77823.1 (hypothetical protein CHLRE_10g453350v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 124.4 bits (311), Expect = 9.600e-25
Identity = 95/284 (33.45%), Postives = 141/284 (49.65%), Query Frame = 0
Query:   52 WSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTI-RGE---LKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDVVEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGV--------LMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDF 324
            +S   +PNP  +        TY CG      K  +S++CDPD +L+ + A  V  ++  I  GE   ++  C   G             Q G QV VAL+ ++ RT  D  E AE FAR+LH  WGVG   C NGVL FLS  DR +YIS G G ++ L+ D +  ++SD++ +LR G +   V        L   G+  E      P  W+   G  +   +V   + F+    R++   +R Y D K KL++++R+Q+ L+    A S+    SCP+CLEDF
Sbjct:   17 YSPDTYPNPMVD--------TYKCG-----RKGVSSWVCDPDGILTYESANVVEGVIKKIFEGETPYVRTYCGASG-------------QIGYQVAVALMRQM-RTTGDPAEYAETFARSLHDRWGVGSSECNNGVLFFLSLNDRQLYISTGAGAKHALSFDVLGDIISDIRPVLREGRFGDAVERGVVNIGLALAGRPVEPGANAKPWSWDDALGLGIFASIVGGLIYFSSRSARRQ---QRRYSDCKSKLDKLKRDQAALR----ANSYNP-TSCPVCLEDF 265          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: XP_005848067.1 (hypothetical protein CHLNCDRAFT_145285 [Chlorella variabilis] >EFN55965.1 hypothetical protein CHLNCDRAFT_145285 [Chlorella variabilis])

HSP 1 Score: 121.7 bits (304), Expect = 6.200e-24
Identity = 96/272 (35.29%), Postives = 142/272 (52.21%), Query Frame = 0
Query:   57 FPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDV-VEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMG-PPGFWE---RWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDF 324
            FPNP  + +        +CG      ++  S +CDPD+LLSK          D I G +K    G+     +  A    +Q G QV VA++ K++        E A+ FA ALH  WGVGD AC NG+L  LS  DR +Y+S GKG +  L D +I  V++D++G LR  D+DG V  A+  +   +  G P G  +    W G V +L V+ A    A+++  ++   +R Y + KR L +++REQ  L+S     ++   +SCPICLEDF
Sbjct:   34 FPNPKIDLQ--------ACG------RDVPSNVCDPDSLLSKAAK-------DYIEGVIKAIWNGDPPYKTQDCA---GKQAGYQVAVAVMRKMELPAGATPAEAAQDFAVALHEKWGVGDAACNNGILFLLSVDDRQVYVSTGKGAQEALPDAKIADVVADIRGELRAADYDGAVKKAIVDIGLGLAGGHPKGDGDGGVDWFG-VGILGVLAAVFGRAVFKSLRR---KREYRECKRMLAKLKREQENLRS----HAWSCPQSCPICLEDF 273          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: PRW57011.1 (glycoside hydrolase [Chlorella sorokiniana])

HSP 1 Score: 120.6 bits (301), Expect = 1.400e-23
Identity = 106/306 (34.64%), Postives = 144/306 (47.06%), Query Frame = 0
Query:   28 LLALSPSFLLLTHAQPDTPGYRE--GWSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDV-VEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMG---PPGFWERWGG----TVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDF 324
            L ALS   LLL       PG  E   WS   FPNP          +  +CG      +  T  +CDPDA+LS K         D I G L+    G+        A    +Q G QV VA++ K+         + A  FA+ LH  WGVGD AC NGVLL L+  DR +Y+S G G    L D +I+ ++ D++ LLR  D+DG V  AV      VD+G     G  +  GG     V    V  A    A ++  ++   +R Y + KR L +++REQ  L+S     ++   +SCPICLEDF
Sbjct:  494 LAALSSLALLLVL----LPGLAEAKAWSADSFPNP--------KQSPVACG----RLEGQTGAVCDPDAVLSAKSK-------DYISGVLQAIWDGD---KPYVTADCAGKQVGYQVAVAVMRKMDFAAGTAPADAARAFAKDLHARWGVGDAACNNGVLLLLAIDDRQVYVSTGTGSMKALPDGKIEDIVGDIRHLLRRQDYDGAVERAV------VDIGLSLAGGEIQSEGGVDWFAVAFFGVFAAVFGNACFKSVRR---KREYRECKRMLAKLKREQENLRS----HAWSCPQSCPICLEDF 760          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: KXJ24683.1 (WD repeat-containing protein 92 [Exaiptasia pallida])

HSP 1 Score: 119.4 bits (298), Expect = 3.100e-23
Identity = 107/386 (27.72%), Postives = 156/386 (40.41%), Query Frame = 0
Query:   34 SFLLLTHAQPDTPGYREGWSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKL----KRTKHDVVEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDFGXXXXXXXXXXXXXXXXXGLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSILGCGHAYCRSCLLMALERERVPRCPICRRT 416
            SFLL       T  +   W    FP+P  + +        SCG   V+     S++CDPD +L    A  + EML  +  +    C  E             +  G QVGVA++ K+    +R+K D+   A+ F   LH  WGVG+  C +GVLL +S  DR +YI+ G+  +  L+DD+ID ++S +K  LR   + G  L    ++   V  G     +  G T+  +  V+ FL             +R YE+   KL+RIERE++  ++ +   S     SCPICLEDF                                                             +L CGH YC  CL   LE      CPICR++
Sbjct:  391 SFLLSLFLSILTTSHGREWLKEHFPHPAKDRE--------SCGRLGVK-----SWICDPDGILKYDEANTLEEMLQHVATKTNSGCSSE------------SETPGYQVGVAVMRKMAVPAERSKEDL---AKDFXSHLHNNWGVGNYGCDDGVLLLMSIQDRQIYITTGRTAKERLSDDQIDIIISKMKSSLRQEKY-GKSLHLAAELMHQVFSGEK--LKXXGNTLYTVFWVVVFLCILFGSIIXSKYKQRQYENCHEKLKRIERERNAAKNSKQYMS----ASCPICLEDF------------------------------------------------------TPTMPTRLLLCGHKYCEPCLSKWLETNAT--CPICRQS 685          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: XP_020909220.1 (uncharacterized protein LOC110247164 [Exaiptasia pallida])

HSP 1 Score: 119.4 bits (298), Expect = 3.100e-23
Identity = 107/386 (27.72%), Postives = 156/386 (40.41%), Query Frame = 0
Query:   34 SFLLLTHAQPDTPGYREGWSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKL----KRTKHDVVEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDFGXXXXXXXXXXXXXXXXXGLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSILGCGHAYCRSCLLMALERERVPRCPICRRT 416
            SFLL       T  +   W    FP+P  + +        SCG   V+     S++CDPD +L    A  + EML  +  +    C  E             +  G QVGVA++ K+    +R+K D+   A+ F   LH  WGVG+  C +GVLL +S  DR +YI+ G+  +  L+DD+ID ++S +K  LR   + G  L    ++   V  G     +  G T+  +  V+ FL             +R YE+   KL+RIERE++  ++ +   S     SCPICLEDF                                                             +L CGH YC  CL   LE      CPICR++
Sbjct:   10 SFLLSLFLSILTTSHGREWLKEHFPHPAKDRE--------SCGRLGVK-----SWICDPDGILKYDEANTLEEMLQHVATKTNSGCSSE------------SETPGYQVGVAVMRKMAVPAERSKEDL---AKDFXSHLHNNWGVGNYGCDDGVLLLMSIQDRQIYITTGRTAKERLSDDQIDIIISKMKSSLRQEKY-GKSLHLAAELMHQVFSGEK--LKXXGNTLYTVFWVVVFLCILFGSIIXSKYKQRQYENCHEKLKRIERERNAAKNSKQYMS----ASCPICLEDF------------------------------------------------------TPTMPTRLLLCGHKYCEPCLSKWLETNAT--CPICRQS 304          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: XP_022792860.1 (uncharacterized protein LOC111331908 [Stylophora pistillata])

HSP 1 Score: 115.5 bits (288), Expect = 4.500e-22
Identity = 103/405 (25.43%), Postives = 171/405 (42.22%), Query Frame = 0
Query:   18 LINFALRLLLLLALSPSFLLLTHAQPDTPGYREGWSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDVVEE-AEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPPGFWERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKR---KLERIEREQSRL-QSLELAESFEGLESCPICLEDFGXXXXXXXXXXXXXXXXXGLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSILGCGHAYCRSCLLMALERERVPRCPICRRTLD 418
            ++  A   ++ L +  +F  L         Y+E      FPNPT + K        +CG          S++CDP+ +LS + A  + E+L ++       C             +   + G Q+GVA++++++    + +EE  + FA+ LH  WGVG   C +G +L +S +DR +Y+S GK    LL+DD+ID ++ ++K  ++   +D GV  AV ++ E V  G         G ++  +++I  +   +      Y+  +  ++ KR   KL+RI+ E+ R  QS +  ES    +SCPICLE+F                                                             +L CGH YC  CL   LE      CPICR++ D
Sbjct:    1 MVRMANASVMFLVILAAFCFLQEGTATREWYKE-----DFPNPTIDVK--------ACG-----RNGKVSWICDPENILSYQAANKIEELLYSVVKNTASGC-------------SNDDKPGFQIGVAVLNRMRGIPGEYIEETTKTFAKHLHDSWGVGHTGCNDGTVLLISILDRQLYVSTGKRAMELLSDDQIDIIIEEMKPYMKKKHYDQGVEHAVVRMGE-VFSGKVLERSANYGLIIFCVLLIIIVGVGL------YIGHKQEQEHKRCEGKLKRIQDERDRARQSQKTYES----KSCPICLEEF------------------------------------------------------QPETKTRLLACGHKYCEPCLTKWLEDHAT--CPICRQSAD 307          
BLAST of NO11G00470 vs. NCBI_GenBank
Match: PSC70754.1 (glycoside hydrolase [Micractinium conductrix])

HSP 1 Score: 112.5 bits (280), Expect = 3.800e-21
Identity = 94/277 (33.94%), Postives = 133/277 (48.01%), Query Frame = 0
Query:   52 WSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKGAIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKLKRTKHDVVEEAEG-FARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGKGVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPP---GFWERWGGTVVMLLVVIAFL-SFAMWQERQKYLDRRGYEDAKRKLERIEREQSRLQSLELAESFEGLESCPICLEDF 324
            W+   FP+  G    +      +CG   V+     + LCDPD LLS K         D + G +     GE       QA      +G QV VA++  L         EA   FA+ LH  WGVGD AC NGVL  LS  DR +YI+ G G    L DDRI  ++SD++  LR  ++D  V  AV  +   ++ G P   G  + +G   V  L V AF+   A ++  +K   +R + + K+ L +++REQ  L+S     ++    SCPICLEDF
Sbjct:  477 WTPASFPDINGPGGPA------ACGRPGVD----RTALCDPDGLLSAKSK-------DYVEGVINAITSGE---PPYTQASCGDSMQGYQVAVAVMRSLLVPSGQAPGEAAAQFAKELHTRWGVGDKACNNGVLFLLSVDDRQVYINTGTGAARALGDDRIQDIVSDIRPQLRAQEYDAAVERAVVDIGLSLEGGHPKGDGSIDFFG---VAFLGVFAFIFGNAAFKSLRK---KRQHSECKKMLAKLKREQENLRS----HAWSCPASCPICLEDF 723          
The following BLAST results are available for this feature:
BLAST of NO11G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KXZ41529.15.800e-3035.81hypothetical protein GPECTOR_413g260 [Gonium pecto... [more]
XP_015761989.14.900e-2927.99PREDICTED: uncharacterized protein LOC107341078 [A... [more]
XP_020603526.11.600e-2729.16uncharacterized protein LOC110042486 [Orbicella fa... [more]
PNW77823.19.600e-2533.45hypothetical protein CHLRE_10g453350v5 [Chlamydomo... [more]
XP_005848067.16.200e-2435.29hypothetical protein CHLNCDRAFT_145285 [Chlorella ... [more]
PRW57011.11.400e-2334.64glycoside hydrolase [Chlorella sorokiniana][more]
KXJ24683.13.100e-2327.72WD repeat-containing protein 92 [Exaiptasia pallid... [more]
XP_020909220.13.100e-2327.72uncharacterized protein LOC110247164 [Exaiptasia p... [more]
XP_022792860.14.500e-2225.43uncharacterized protein LOC111331908 [Stylophora p... [more]
PSC70754.13.800e-2133.94glycoside hydrolase [Micractinium conductrix][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR067ncniR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00470.1NO11G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674580gene_10275Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00470.1NO11G00470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00470 ID=NO11G00470|Name=NO11G00470|organism=Nannochloropsis oceanica|type=gene|length=1955bp
ATGGCCCAGCGCCTCTCTCCACACCCGAGAACCCGGCGGCCTTGCACACC
CCTCATCAACTTCGCACTCCGTCTCCTCCTTCTTCTGGCTTTGAGTCCCT
CGTTCCTCCTCCTCACCCATGCGCAACCCGACACGCCGGGGTACCGCGAG
GGATGGAGTTTAACCCAATTTCCCAACCCGACGGGCAACAGCAAGAACAG
CAAGACTAGCACCACCTACAGCTGCGGGGCTTTCCACGTGGAGGCGAAAG
AAAGCACGTCTTTCCTCTGTGACCCAGACGCGCTATTGTCGAAAAAAGGT
GCGATCGCCGTGCATGAAATGCTGGATACCATCCGAGGCGAGTTGAAGGT
TTCATGTCCCGGAGAGGGGGGGGGCGGGGAGGAAGGACAAGCGCCGGCGC
AACAGCAACAAAAGGGCTTGCAAGTCGGAGTTGCCCTGGTGCATAAATTG
AAGAGGACGAAGCATGACGTGGTGGAGGAAGCAGAGGGCTTCGCGCGGGC
GTTGCATGGTATGTGGGGGGTGGGGGATCTGGCGTGCCAGAACGGGGTGC
TACTATTCCTATCCCGCGTGGACAGAACCATGTATATATCTCGAGGTAAG
GGCGTCGAGAATTTATTGACAGACGACAGGATCGACCAGGTGATGAGTGA
TGTGAAGGGCCTTCTGAGAGGGGGTGATTGGGACGGGGGGGTGTTAATGG
CAGTGGGGAAAGTGGCCGAGTGGGTCGATATGGGCCCACCGGGCTTCTGG
GAGAGATGGGGAGGGACGGTGGTGATGCTCTTGGTGGTGATTGCATTCCT
ATCGTTCGCGATGTGGCAGGAAAGACAGAAGTATTTGGATCGGAGAGGGT
ATGAAGACGCAAAGAGGAAATTGGAGAGGATTGAGAGGGAGCAGTCACGG
TTGCAGTCCCTCGAGCTGGCCGAGTCGTTTGAAGGGTTGGAGAGCTGCCC
CATCTGCTTGGAAGATTTCGGGGAGGAGGAGGGGAAGGAGGAGGAGGAGG
AAGAGAGGGAAGAGGAGAGGCAGGGGTTGGTGAGGAGGAGTGGGAGTGGG
GAAGAGAAGGGGGAGAGGGAGAGCGAGGGCGAGGAGGTAATATTGGGGGA
GGGAAGGAGGAGGAGGAGGGAGAAGAAGGGGAGTGATGGGAAGCGGGTCA
GTATATTGGGATGTGGGCATGCGTATTGTCGGAGCTGTTTACTGATGGCA
TTGGAGAGGGAGAGGGTGCCACGTTGTCCCATTTGTAGGAGGACGCTCGA
TGAAGGGATGAGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGCAGGAG
GAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGAGGAGATGGAGGAG
TGGATAGGGGGGAAGGAGAGGGAAGAGGGACTGGAGGAGGAGGAGGAGGA
GGGGGTGGTGGTGAAGGGACAAGAGCAGGGACGAGTGGAGGGCCATGTCG
GGTAGATGACAGCAGCAGTAACAGAAGCCGCAGTAGTGGTGTAGGCATTG
GGTCTACGATCTCCTTGGGACGAGGAAGGGGAGGAGGAGGAGGGGCTAGA
GCAAGAAGATTGTTTGCAGAGGCAGAGATTTTGTATCGGCTTAGCCAGTT
GCAGCGACAACACCCTAACATTGTGCGGCCGGAGATGGTTACACGATGGA
CTCAACCAGGGGGGTATACAGGCAGATTTACCGCTGATGCGAGCTTTGTC
GATGCAAATCCGCGTGTGCAATTTGCGCGACAGCAGGCTCACTATGGGTC
GTCGGTGCGGATGGGCGGGATAGGGGCAGGGGAGAGGAGGGGGTTTGGAG
GAGGGATGAGCAGTGGGGGTAGGGGAAGTCGGTGGTAGAGGGGAATTGAA
GGGAGGAAAGAAGAAAAGAAAGAGTGAGAATGAATGGGTGATAGATGGAC
AACAAAAGAAATAGAGTGACAAGTAAGACAATGGATGACTGAACATAGAA
AGAAG
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protein sequence of NO11G00470.1

>NO11G00470.1-protein ID=NO11G00470.1-protein|Name=NO11G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MAQRLSPHPRTRRPCTPLINFALRLLLLLALSPSFLLLTHAQPDTPGYRE
GWSLTQFPNPTGNSKNSKTSTTYSCGAFHVEAKESTSFLCDPDALLSKKG
AIAVHEMLDTIRGELKVSCPGEGGGGEEGQAPAQQQQKGLQVGVALVHKL
KRTKHDVVEEAEGFARALHGMWGVGDLACQNGVLLFLSRVDRTMYISRGK
GVENLLTDDRIDQVMSDVKGLLRGGDWDGGVLMAVGKVAEWVDMGPPGFW
ERWGGTVVMLLVVIAFLSFAMWQERQKYLDRRGYEDAKRKLERIEREQSR
LQSLELAESFEGLESCPICLEDFGEEEGKEEEEEEREEERQGLVRRSGSG
EEKGERESEGEEVILGEGRRRRREKKGSDGKRVSILGCGHAYCRSCLLMA
LERERVPRCPICRRTLDEGMSGGGGGGGGGGAGGGGGGGGGGGGREEMEE
WIGGKEREEGLEEEEEEGVVVKGQEQGRVEGHVG*
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Synonyms
Publications