NO11G00170, NO11G00170 (gene) Nannochloropsis oceanica

Overview
NameNO11G00170
Unique NameNO11G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1819
Alignment locationchr11:74427..76245 -

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Properties
Property NameValue
DescriptionAnkyrin repeat family protein with DHHC zinc finger domain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:74427..76245 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO11G00170 vs. NCBI_GenBank
Match: EWM25212.1 (hypothetical protein Naga_101022g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 87.0 bits (214), Expect = 1.400e-13
Identity = 109/267 (40.82%), Postives = 135/267 (50.56%), Query Frame = 0
Query:  120 GSVSLASFLLSRGASLLATDDEGYTPLICACYFK--RERLIALFLSSIPPSLP------PSCHVDLPLVADVLH-VGKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKDAAAAAFAQKCLEEAMREGERAWMMRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDNQHLMTDVEDXXXXXXXXSGMKRMTAVLTFVMDSDERRKGLCKDLFQELMDFVQVRWAGRV 378
            G+  L ++L     S L T       LI  C F       I  ++ +IPPSL       P       L +  L+ V  T   +     F   + L  + G ADPT+ D+RG+TPLD+L W RW D   A  AQ+ LEEA+RE +R  ++RAG         XXXXXXXXXXXXXXXXXXXXXX                     T           XXXXXXXX   +++ AVL FV+DS E R GLC DLF+ELM+  QVRWA RV
Sbjct:   50 GNPLLFNYLYIYHPSPLDTHPPSQVILIFLCLFVYILPSCIITYIHAIPPSLTLTLPSRPVSSFSACLCSSFLYDVDATFAPVL----FLPPLFLPSSSGGADPTVVDDRGKTPLDILHWQRWNDVTGAVTAQRLLEEALREPDRVRIVRAG--RKAREGGXXXXXXXXXXXXXXXXXXXXXXREEFGGGGQVHGRERKVDARMTKRASXXXXXXXXXXXXXXXXXREKVRAVLKFVLDS-EMRPGLCPDLFEELMEMTQVRWAERV 309          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_021339216.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X1 [Mizuhopecten yessoensis] >XP_021339217.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X1 [Mizuhopecten yessoensis] >OWF37232.1 Ankyrin-3 [Mizuhopecten yessoensis])

HSP 1 Score: 71.2 bits (173), Expect = 7.800e-9
Identity = 53/176 (30.11%), Postives = 80/176 (45.45%), Query Frame = 0
Query:   77 TLLVHACYYNKEEIAKYLVDRKGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLI-ALFLSSIPPSLPPS-----------------CHVDL--------PLVADVLHV-GKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPL 226
            T L+ A   ++ E+A  L     + V  T R G+T+LHYAA NG+  + + L+  GAS  + D++G TPL  AC      ++  + L+    S+  S                 CH+D+        P + D   V GKT L +AC     + + L L +  ADP   D   +TPL
Sbjct:  166 TPLIMAARESRTEVAALLCQHSSSDVNLTDRQGRTALHYAACNGNDEMTAILIQGGASSNSVDEDGITPLYTACKHGHTAVVRRILLAGADKSISMSSRSNNNGFYPLHIAVLQCHIDVVRLLCHTNPAMVDTRTVTGKTPLILAC-HNGRRDIVLFLLRCGADPNANDSFHQTPL 340          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_021339218.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X2 [Mizuhopecten yessoensis])

HSP 1 Score: 71.2 bits (173), Expect = 7.800e-9
Identity = 53/176 (30.11%), Postives = 80/176 (45.45%), Query Frame = 0
Query:   77 TLLVHACYYNKEEIAKYLVDRKGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLI-ALFLSSIPPSLPPS-----------------CHVDL--------PLVADVLHV-GKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPL 226
            T L+ A   ++ E+A  L     + V  T R G+T+LHYAA NG+  + + L+  GAS  + D++G TPL  AC      ++  + L+    S+  S                 CH+D+        P + D   V GKT L +AC     + + L L +  ADP   D   +TPL
Sbjct:   85 TPLIMAARESRTEVAALLCQHSSSDVNLTDRQGRTALHYAACNGNDEMTAILIQGGASSNSVDEDGITPLYTACKHGHTAVVRRILLAGADKSISMSSRSNNNGFYPLHIAVLQCHIDVVRLLCHTNPAMVDTRTVTGKTPLILAC-HNGRRDIVLFLLRCGADPNANDSFHQTPL 259          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: PDM73535.1 (Ankyrin repeat-containing protein [Pristionchus pacificus])

HSP 1 Score: 69.3 bits (168), Expect = 2.900e-8
Identity = 52/187 (27.81%), Postives = 77/187 (41.18%), Query Frame = 0
Query:   78 LLVHACYYNKEEIAKYLVDRKGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALF--------------------------LSSIPPSLPPSCHVDLPLVADVLHVGKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKDAAA 239
            L+ HA   N  E+ + L +  GA    T    + +LH AA NG+     FLL  G ++ A D  G+TPL+CA        I                             L ++       C+++     D  + G++ALH+A   + P  +  LL  G A P L+D  GR+PLD    + W D  A
Sbjct:  584 LVCHAAKMNNIELLEELKE-SGAVFSLTDYNSRNALHVAASNGNTEATKFLLQNGVNVHAKDQWGFTPLMCAVRSASMECIEAIRQAGGVIDGDHEEDGMELCYAASHGDLKTLKAYAAAGCNLN-----DTDYDGRSALHLAVTHRRPDAISFLLESG-AQPDLKDFFGRSPLDEAAAMGWADVIA 763          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_014231413.2 (ankyrin-1-like [Trichogramma pretiosum])

HSP 1 Score: 67.0 bits (162), Expect = 1.500e-7
Identity = 47/145 (32.41%), Postives = 70/145 (48.28%), Query Frame = 0
Query:  101 RVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKDAAAAAFAQKC 246
            +++A  + GKTSLH+A   G   L  FLL RG +    D +G TPL   C   R   + +F  S+   +  +  +D     D  ++G+T LH A  R   +  + LL +G ADP   +E G TPL ++    + D     F Q C
Sbjct:  312 QIDAQDKDGKTSLHWAIHYGIEKLTRFLLRRGVNPNLADSDGSTPLHYICNSHRGNWLRIFF-SVTDDMQQTVLID---ARD--NLGRTPLHWALSRGLDRVAEFLLRRG-ADPNSANEEGLTPLHIICNRNYNDDLLGIFFQIC 449          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_014228772.2 (ankyrin-1-like [Trichogramma pretiosum])

HSP 1 Score: 67.0 bits (162), Expect = 1.500e-7
Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 0
Query:   74 NGRTLLVHACYYNKEEIAKY---LVD--RKGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVL 229
            +G T L   C  N+ ++ +    +VD  RK  ++      G T LH A  +G V+    LL+RGA + + ++EG TPL   C   R  L+ LF   +        H     +     +G T LH+A      +  ++LLT+G ADP   ++ G TPL ++
Sbjct:  629 DGSTALHFICRDNRLDLLRLFFEIVDKHRKAVQINVRDSLGNTPLHLAVESGKVTTFKLLLTRGADVNSVNEEGSTPLHIMCRKSRIDLLTLFFKIVDK------HKKAVQINVRDSLGNTPLHLALKNGSLKTSEILLTRG-ADPNSANQEGSTPLHIM 781          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: GBG32111.1 (Ankyrin repeat domain-containing protein 50 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 66.2 bits (160), Expect = 2.500e-7
Identity = 56/154 (36.36%), Postives = 73/154 (47.40%), Query Frame = 0
Query:   75 GRTLLVHACYYNKEEIAKYLVDRKGARVEATTRTGKTSLHYAAIN---GSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPL 226
            G TLL  A  +  + I K L  R G +       G+T LH  A     G   LA +L+S+GAS+L  D+ GYTPL+ A       L+ +F          + H DL    DV   G TALH+A L      VQ+LL +G AD   +D  G  PL
Sbjct: 1132 GDTLLHRAVAHGSKRIVK-LSLRHGVKPNVKNNEGQTCLHALASKAYPGQDQLADYLMSKGASILVQDNAGYTPLMEAASRGHIGLVNVF----------TTHADLE-ARDV--EGNTALHLAALHDHWSIVQMLLEKG-ADRDCRDAAGAHPL 1270          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_007556277.1 (PREDICTED: inversin isoform X1 [Poecilia formosa] >XP_016528936.1 PREDICTED: inversin isoform X1 [Poecilia formosa])

HSP 1 Score: 65.5 bits (158), Expect = 4.300e-7
Identity = 54/176 (30.68%), Postives = 81/176 (46.02%), Query Frame = 0
Query:   75 GRTLLVHACYYNKEEIAKYLVDRKGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGK-TALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKDAAAAAFAQKCLEEA 250
            GRT L++    ++ + A+ L+ + GA V  T  + +++LH AA  G+V     LLSR A+ L  D EG TPL  A      + +AL L  I P              D     K TALH +     P+ V+LL+    ++  + D  G+ P   L W      A+A    +C+ EA
Sbjct:   47 GRTPLMYCVLADRLDCAEVLL-KSGASVNKTDHSQRSALHLAAQKGNVRFLKLLLSRRANCLQKDLEGMTPLHLATRHPSPKALALLLKHIGPG-----------EVDTQDKNKQTALHWSAFYNRPEHVRLLIKHD-SNIGIPDSEGKIP---LHWAAHSQEASATQTVRCILEA 206          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_014234507.1 (uncharacterized protein LOC106657483 [Trichogramma pretiosum] >XP_014234508.1 uncharacterized protein LOC106657483 [Trichogramma pretiosum] >XP_014234509.1 uncharacterized protein LOC106657483 [Trichogramma pretiosum])

HSP 1 Score: 65.5 bits (158), Expect = 4.300e-7
Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 0
Query:   90 IAKYLVDR---KGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGKTALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKD 236
            IAK L+D      A +   T +G+T+LHYA +NGS  L +  L  GA++ A + +G  PL  A  F+  ++  L L             +  +V    + G T LH A  ++  + VQLLL  G AD   +D  G TPL +   L + D
Sbjct:  126 IAKLLLDTGPDSKALLNECTDSGETALHYAIMNGSRELLTLFLQYGANVNAKNRDGKCPLFFAIEFENTKIAKLLLKH-----------EATIVNSKTNHGITPLHEAITQRAEKNVQLLLDYG-ADVNAKDIYGNTPLHIAARLNYLD 262          
BLAST of NO11G00170 vs. NCBI_GenBank
Match: XP_014885347.1 (PREDICTED: inversin isoform X1 [Poecilia latipinna] >XP_014885356.1 PREDICTED: inversin isoform X1 [Poecilia latipinna])

HSP 1 Score: 65.5 bits (158), Expect = 4.300e-7
Identity = 54/176 (30.68%), Postives = 81/176 (46.02%), Query Frame = 0
Query:   75 GRTLLVHACYYNKEEIAKYLVDRKGARVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICACYFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGK-TALHIACLRQFPQGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKDAAAAAFAQKCLEEA 250
            GRT L++    ++ + A+ L+ + GA V  T  + +++LH AA  G+V     LLSR A+ L  D EG TPL  A      + +AL L  I P              D     K TALH +     P+ V+LL+    ++  + D  G+ P   L W      A+A    +C+ EA
Sbjct:   47 GRTPLMYCVLADRLDCAEVLL-KSGASVNKTDHSQRSALHLAAQKGNVRFLKLLLSRRANCLQKDLEGMTPLHLATRHPSPKALALLLKHIGPG-----------EVDTQDKNKQTALHWSAFYNRPEHVRLLIKHD-SNIGIPDSEGKIP---LHWAAHSQEASATQTVRCILEA 206          
The following BLAST results are available for this feature:
BLAST of NO11G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25212.11.400e-1340.82hypothetical protein Naga_101022g2, partial [Nanno... [more]
XP_021339216.17.800e-930.11serine/threonine-protein phosphatase 6 regulatory ... [more]
XP_021339218.17.800e-930.11serine/threonine-protein phosphatase 6 regulatory ... [more]
PDM73535.12.900e-827.81Ankyrin repeat-containing protein [Pristionchus pa... [more]
XP_014231413.21.500e-732.41ankyrin-1-like [Trichogramma pretiosum][more]
XP_014228772.21.500e-730.00ankyrin-1-like [Trichogramma pretiosum][more]
GBG32111.12.500e-736.36Ankyrin repeat domain-containing protein 50 [Auran... [more]
XP_007556277.14.300e-730.68PREDICTED: inversin isoform X1 [Poecilia formosa] ... [more]
XP_014234507.14.300e-732.89uncharacterized protein LOC106657483 [Trichogramma... [more]
XP_014885347.14.300e-730.68PREDICTED: inversin isoform X1 [Poecilia latipinna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR081ncniR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00170.1NO11G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|662712gene_10706Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101022g2gene5291Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00170.1NO11G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00170 ID=NO11G00170|Name=NO11G00170|organism=Nannochloropsis oceanica|type=gene|length=1819bp
ATGGCCGCCGCCCTCTTCCTCCCCACCCTCCATCCTTCCCTCCCTCCGGC
CCTCCACCTCCGCCTATTCGACGCTGTCCGCGAAGGGGCCCTAGACCGGT
TCGTCCGCCTTTTCTACCAAGCCGAGGCCACGCTGCTCTCCTCCTCCACG
CTGCTCTCCTCCTCCTCCTCCTCTTCCCTCCCTCCCAACCTCCTGCTAGA
ACGGCCCTCCCCTCAGCACAACGGCCGGACCCTCCTCGTGCATGCTTGCT
ATTACAACAAGGAAGAGATAGCCAAGTATCTGGTCGATAGAAAAGGTGCC
CGGGTGGAGGCAACGACGAGGACCGgtacataggaaggggaagagggagg
gagggagggagagagggagggaaggaggactattattcatcacacagggt
gattctcacccctccctcattccctgctttccttccttcctccttcccct
cagGCAAAACCTCCCTTCACTACGCCGCCATCAACGGCAGCGTCTCCCTA
GCTTCCTTCCTCCTCTCCCGCGGCGCGTCCCTCCTGGCCACCGACGACGA
AGGATACACGCCGCTCATCTGCGCCTGCTACTTCAAACGTGAACGCCTCA
TCGCACTCTTCCTCTCCTCCATCCCGCCCTCTCTTCCACCCTCTTGCCAC
GTCGACCTCCCCCTTGTGGCCGATGTGCTGCACGTGGGAAAGACAGCGCT
CCATATAGCATGTCTCAGGCAATTTCCTCAGGGGGTGCAGCTGCTGCTGA
CCCAAGgtaagctcttacttccctccttccttccctcccaccctcctttc
cttccttccttccttccttccttccagtctgccttcgtagagagtgtcat
tctcatgctccccttccgacatgcctcccttcctccatccctccttttgt
cttggccgtcaccatggtgcaagaggagggtgtcatcctcacctcccctt
ccctccttccttccctcccctcctccctgcctccttcagGCTGTGCCGAC
CCCACACTGCAAGACGAGAGAGGGAGAACTCCTCTTGATGTGCTCAAGTG
GCTGCGATGGAAGGATGCTGCTGCTGCTGCCTTTGCCCAAAAATGTCTGG
AGGAGGCCATGCGCGAGGGAGAGAGGGCATGGATGATGAGGGCGGGAAGG
AAGGCAAGGGAGGAGGGAAAGAGGGAGGGAGGGGTAGGAGGACTGAGTTG
TGGGGAGGAGGAAGAGAAGTTGGAAGGGGGGAAGGGGGATGACGTAGCTG
GAAAGGGGAGGGAGGAGCGACAGGAAGGGAGGAAGGGAGGGAGGGCGGGG
AGGACAGATAACCAGCACCTTATGACTGACGTAGAGGATGAAAACGAGGA
CGAGGACGAGGAAAGTGGAATGAAGCGGATGACAGCGGTATTGACCTTTG
TGATGGACAGTGATGAGCGTCGGAAGGGACTGTGTAAGGATTTATTCCAA
GAGCTGATGGATTTCGTGCAAGTCCGGTGGGCGGGGAGGGTGATGGAGGG
AAGGAAGGGAGGGAGGAGAGGGAGGTAGCAAGCGGTGATTTGCAGATACA
CATAAGACAACAAGAGAATAAGGAAGTCAATGTGGGTCAACAGACTCACG
AAAGGATTCAAGAAAGAAAAAGGTGGATCGAGAGGATACTCACAGGTCTG
TGAGCTTCTCAGGTAAAGAGATAGACAAGAGCGAGCAGTGTGAAAATGAA
ATGAGATGCATGTAAATAAAGCCCCTTCGCCTTCTTGGCGCACTTCATGA
AGGCTTCGTTTGTGGATAAAGAAGGAAAAAGACAAACACTTTGACAAGGA
GAGCAGCGGTGAAAAGTAT
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protein sequence of NO11G00170.1

>NO11G00170.1-protein ID=NO11G00170.1-protein|Name=NO11G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp
MAAALFLPTLHPSLPPALHLRLFDAVREGALDRFVRLFYQAEATLLSSST
LLSSSSSSSLPPNLLLERPSPQHNGRTLLVHACYYNKEEIAKYLVDRKGA
RVEATTRTGKTSLHYAAINGSVSLASFLLSRGASLLATDDEGYTPLICAC
YFKRERLIALFLSSIPPSLPPSCHVDLPLVADVLHVGKTALHIACLRQFP
QGVQLLLTQGCADPTLQDERGRTPLDVLKWLRWKDAAAAAFAQKCLEEAM
REGERAWMMRAGRKAREEGKREGGVGGLSCGEEEEKLEGGKGDDVAGKGR
EERQEGRKGGRAGRTDNQHLMTDVEDENEDEDEESGMKRMTAVLTFVMDS
DERRKGLCKDLFQELMDFVQVRWAGRVMEGRKGGRRGR*
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Synonyms
Publications