NO11G00140, NO11G00140 (gene) Nannochloropsis oceanica

Overview
NameNO11G00140
Unique NameNO11G00140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1432
Alignment locationchr11:63031..64462 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:63031..64462 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM26413.1 (hypothetical protein Naga_101468g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 226.5 bits (576), Expect = 1.700e-55
Identity = 114/192 (59.38%), Postives = 136/192 (70.83%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECTLILDPDFNAFKVVEAATGAP 384
            + +KRVF+A    D CAPETL VT LAYLVNATDL+ YCA PLA PAV+ VRY   KK          TCAPTPAP+VNPA PF LFG+GQRCL+A +LAPF  DRRL +  +G  +    +  +HR L   I TP++CF YCS+NG ES PFFFNWNTVT+QCFCCG  CTLI+DP F+A++V   AT AP
Sbjct:  148 KGNKRVFKAKAKVDACAPETLTVTGLAYLVNATDLTTYCATPLASPAVLNVRYSKAKKV--------ATCAPTPAPTVNPAQPFVLFGDGQRCLEASRLAPF-DDRRLLSSSNGR-EYAHSIHREHRHLQ-SIATPSDCFTYCSLNGGESVPFFFNWNTVTSQCFCCGNVCTLIVDPAFSAYEVTMDATSAP 328          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM25605.1 (hypothetical protein Naga_100543g1 [Nannochloropsis gaditana])

HSP 1 Score: 203.8 bits (517), Expect = 1.200e-48
Identity = 104/193 (53.89%), Postives = 131/193 (67.88%), Query Frame = 0
Query:  195 KRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKK--TGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDG-ELDSLSDVGGK-HRRLP-VQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECTLILDPDFNAFKVVEAATGA 383
            K +F+  V  ++CA E L V  LAY++NATD +  C+  LA P  +R+RYP  +K   GK     P+TCAPTPAP+ NP+ PF  FG GQRCL+A +LAPF  DRRL   +D  ++   S V  K HR L  V I TP +C+ YCS+NG ES PFFFNWNT TTQCFCCGG+CTLILDP+F+ F+V+  AT A
Sbjct:  112 KHLFRVKVGVENCASEALAVRVLAYVLNATDSATECSQSLANPLNLRIRYPASQKYGLGKKKQKMPMTCAPTPAPTTNPSAPFVPFGVGQRCLEASRLAPF-EDRRLKGQEDTIKISEDSKVDDKIHRPLGLVAIQTPFDCYTYCSLNGGESAPFFFNWNTATTQCFCCGGQCTLILDPEFDTFQVLIPATAA 303          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM21515.1 (hypothetical protein Naga_100317g3 [Nannochloropsis gaditana])

HSP 1 Score: 191.0 bits (484), Expect = 7.800e-45
Identity = 93/184 (50.54%), Postives = 118/184 (64.13%), Query Frame = 0
Query:  195 KRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECTLILDPDFNAFKVVEA 379
            +++F   V ADDCAP+ L++ ALAYL NAT  + +C VPL++P V+ +RY   K+T         TC PTPAPS+N A PF  FG GQRC +A +LAPF   R    L+ G L   + V     R    IDTP +C+EYCS+NG    PFFFNWNTV ++C CC GECTLI DP F+AFKV+ A
Sbjct:  115 RKLFHVKVQADDCAPKQLEINALAYLANAT--TTHCTVPLSKPEVLNIRYAESKRT--------TTCVPTPAPSINLAEPFVPFGLGQRCAEASRLAPFGDRRLQEHLERGRLQDNTRVISARARHLQGIDTPQQCYEYCSLNGGAPAPFFFNWNTVASECLCCAGECTLIRDPAFDAFKVIVA 288          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM23483.1 (putative lipase, partial [Nannochloropsis gaditana])

HSP 1 Score: 190.3 bits (482), Expect = 1.300e-44
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSA----LDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVVEAATGAPSA 386
            +  KR F+  V AD+CAP+TL V A AYLVNATD S  C  PLA PA+V+VRY   K           TCAPTPAP++NP  PF L GEGQR  Q G+LAPF  DRRLSA       G + S    G +H +    IDTP  C+EYCS+N  E  PF F+WNTVT+QCFCC G CT L+ DPDFN ++ +   T +P++
Sbjct:  115 KGGKRRFRVKVKADECAPDTLAVDAFAYLVNATDAS--CITPLASPAIVKVRYSKLKNA--------ATCAPTPAPTINPTQPFVLLGEGQRFSQGGRLAPF-QDRRLSAHPGSSKHGGIMSFGRAGDRHLQ---SIDTPEACYEYCSLNSGEVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDFNVYEALLPKTSSPTS 299          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: XP_005852708.1 (hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526] >EKU23125.1 hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 184.9 bits (468), Expect = 5.600e-43
Identity = 99/199 (49.75%), Postives = 125/199 (62.81%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSAL----DDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVVEAATGAPSA 386
            +  KR ++  + AD+CAPETL V A AYLVNATD S  C  PLA PA+V+VRY   K           TCAPTPAP++NP  PF L G+GQR  Q G+LAPF  DRRLSA       G + +L   G +H +    IDTP  C+EYCS+N  E  PF F+WNTVT+QCFCC G CT L+ DPD N ++ +   T +P++
Sbjct:  246 KGGKRRYRVNMKADECAPETLAVDAFAYLVNATDAS--CITPLASPAIVKVRYSKLKNA--------ATCAPTPAPTINPTQPFVLLGKGQRFSQGGRLAPF-QDRRLSAYPASSKHGSIMALGQAGHRHLQ---SIDTPQACYEYCSLNSGEVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDSNVYEALLPKTCSPTS 430          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: XP_005853450.1 (hypothetical protein NGA_0436200, partial [Nannochloropsis gaditana CCMP526] >EKU22911.1 hypothetical protein NGA_0436200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 183.7 bits (465), Expect = 1.300e-42
Identity = 100/185 (54.05%), Postives = 117/185 (63.24%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSA----LDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFN 372
            +  KR F+  V AD CAPETL V A AYLVNATD S  C  PLA PA ++VRY   K           TCAPTPAP++NP  PF L GEGQR  Q G+LAPF  DRRLSA       G + +L   G +H +    IDTP  C+EYCS+NG +  PF F+WNTVT+QCFCC G CT L+ DPDFN
Sbjct:   34 KGGKRRFRVKVKADKCAPETLAVDAFAYLVNATDAS--CITPLASPATLKVRYSKLKNA--------ATCAPTPAPTINPTQPFVLLGEGQRFSQGGRLAPF-QDRRLSAHPGSSKHGGIMALGQAGDRHLQ---SIDTPEACYEYCSLNGGKVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDFN 204          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20143.1 (hypothetical protein Naga_101529g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 178.7 bits (452), Expect = 4.000e-41
Identity = 96/186 (51.61%), Postives = 116/186 (62.37%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGE--LDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFK 375
            +  KRVF+A V  + CAPETL VT LAY  NAT  S +C  PL  P ++ VRY   KK+         TCAPTPAP+VNP  PF LFGEGQR  Q G LAPF   RRLS   D +   D+       +R+LP  I TP +CFEYCS+N N S+PF F+WN V TQCFCC   CT LI DPD++ ++
Sbjct:  115 KGGKRVFRAKVAVEKCAPETLVVTGLAYFANAT--STFCETPLTNPEILHVRYGKFKKS--------ATCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPF-NTRRLSMHSDSDEVRDASQTRRAVNRQLPPVIATPEDCFEYCSLNANVSSPFLFSWNRVATQCFCCLSVCTPLIFDPDYDVYE 289          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20109.1 (hypothetical protein Naga_101756g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 176.8 bits (447), Expect = 1.500e-40
Identity = 99/190 (52.11%), Postives = 124/190 (65.26%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVVEAAT 381
            +  KRVF+A V+ D+CAPE L +T LAYL NAT  + +C  PLA P V+RVRY      GK  S + VTCAPTPAP+VNP  PF LFGEGQR  Q G LAPF+ +RRLS +  G     S     +R+L   I T   C+EYCS+N N S+PFFFNWN VT++CFCC   CT  I DP ++ ++V+  AT
Sbjct:  115 KGGKRVFRAKVVVDECAPEMLVITGLAYLANAT--ATFCETPLASPEVLRVRY------GK--SKRSVTCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFS-ERRLS-MHPGP----SKTHVANRQLQA-IGTTEACYEYCSLNANVSSPFFFNWNRVTSECFCCLSTCTPFIFDPAYDVYEVIIPAT 287          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20327.1 (hypothetical protein Naga_100406g12, partial [Nannochloropsis gaditana])

HSP 1 Score: 176.8 bits (447), Expect = 1.500e-40
Identity = 97/189 (51.32%), Postives = 120/189 (63.49%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHR---RLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVV 377
            +  KR F+  V AD CAPETL V A AYL+NATD S  C  PLA PA+V+VRY           +K  TCAPTPAP+VNP  PF L GEG R  Q  +LAPF  DRRLS L  G ++   D+  ++    R    IDTP  C+EYCS+NG E  PF F+WN +T+QCFCC G CT LI+DPD+N ++ +
Sbjct:  146 KGGKRRFRVKVKADQCAPETLAVNAFAYLMNATDTS--CITPLANPAIVKVRY--------LKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPF-EDRRLS-LHTG-INRHEDIFARYHPEDRQLQSIDTPEACYEYCSLNGGEEVPFLFSWNIMTSQCFCCAGVCTPLIVDPDYNVYEAL 321          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20839.1 (secreted protein [Nannochloropsis gaditana])

HSP 1 Score: 172.9 bits (437), Expect = 2.200e-39
Identity = 96/190 (50.53%), Postives = 115/190 (60.53%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALD----DGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVV 377
            +  K  F+  V AD+CAPETL V A AYLVNAT  +A C  PL   A+V+VRY            K  TCAPTPAPS+NP  PF LFG GQR  Q G+LAPF  +RRLSA       G L +LS    +H +    IDTP  C+EYCS+N  E TPFFF+WN VT QCFCC   CT  + DPD N ++ +
Sbjct:  141 KGGKLRFRVKVKADECAPETLAVDAFAYLVNAT--AASCITPLVNAAIVKVRY--------SKLDKAATCAPTPAPSINPTQPFVLFGAGQRFSQGGRLAPF-QNRRLSARSGMNTHGTLAALSQPRDRHLQ---SIDTPEACYEYCSLNAGEETPFFFSWNIVTRQCFCCVAVCTPFVFDPDSNVYEAL 316          
The following BLAST results are available for this feature:
BLAST of NO11G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26413.11.700e-5559.38hypothetical protein Naga_101468g1, partial [Nanno... [more]
EWM25605.11.200e-4853.89hypothetical protein Naga_100543g1 [Nannochloropsi... [more]
EWM21515.17.800e-4550.54hypothetical protein Naga_100317g3 [Nannochloropsi... [more]
EWM23483.11.300e-4451.26putative lipase, partial [Nannochloropsis gaditana... [more]
XP_005852708.15.600e-4349.75hypothetical protein NGA_0705900, partial [Nannoch... [more]
XP_005853450.11.300e-4254.05hypothetical protein NGA_0436200, partial [Nannoch... [more]
EWM20143.14.000e-4151.61hypothetical protein Naga_101529g1, partial [Nanno... [more]
EWM20109.11.500e-4052.11hypothetical protein Naga_101756g1, partial [Nanno... [more]
EWM20327.11.500e-4051.32hypothetical protein Naga_100406g12, partial [Nann... [more]
EWM20839.12.200e-3950.53secreted protein [Nannochloropsis gaditana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR081ncniR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00140.1NO11G00140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00140.1NO11G00140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00140 ID=NO11G00140|Name=NO11G00140|organism=Nannochloropsis oceanica|type=gene|length=1432bp
ATGTCCCGTTGCGAACCCGGGGCTCTGTTCCACAATGCGGTACTGCTCCA
ACTTGTAGGGTCGATCAATCATGGGCACACCCACGGGATACTTGACGAAC
GTGGCCACGGCAATTCCCTGGATGTTAACTGTATGGTGCGGACCTTCCTC
CAACACAATCGAAAAGAGGCTCGGGAAGTGCCTCTTAGTGTCACAGGCGA
ACTCCCAGTGGGGACGAATCCAGCGGGTTCCATTCATGAGGAGTGGATGC
GTAGGATTAATCAGAAAGCCTGGGGCAAGCTCACATACGTCGATCATCGC
GCCGCCACCATTCACGCCCAAGGGAGCCTCAACAAGAGAAAGCATCTTGG
CATGGATATGGAGGTTGTGCGGGTCGACCGAGACGAGGTCGCCTCTGCGA
AGTGCATGAACGGGCTTAGACGTGCCATCCGCCATGACCACGAGTGCGTC
CTTGTTGAAGCAAGGTTGAACAgtaggtgcgggagtcgcactaggcgtgg
ccgtcggagatgtagtaggcgtggccgttggagatgcagtagGCGTGGCC
GTCGGAGATGCAGTAGGCGTGGCAGTAGGAGAAGTAGTAGGCGTGGCTGT
TGGAGAGGCCGAGGGAGAAGCCGAAGGGCTGCTTGAGGGCGACGAGAGCT
CCAAGCGTGTCTTCCAGGCCGTGGTGATCGCCGACGACTGTGCCCCTGAG
ACGCTGGATGTCACTGCCCTGGCGTACCTTGTCAACGCCACGGACCTGTC
CGCTTACTGTGCTGTACCCTTGGCCGAGCCCGCGGTCGTGCGTGTGCGGT
ATCCAGGCGACAAGAAGACGGGCAAACACGCTTCGTCGAAACCTGTCACA
TGCGCGCCGACCCCGGCCCCGAGCGTCAACCCCGCAACTCCCTTCCAACT
TTTTGGTGAGGGGCAGCGATGCTTGCAGGCAGGGCAACTGGCGCCTTTTG
CTCCAGATCGCCGTCTGTCGGCCCTAGATGATGGGGAACTTGATTCGCTA
AGCGATGTTGGTGGCAAGCACCGTCGACTGCCTGTGCAGATTGATACCCC
GACGGAGTGCTTCGAATACTGCTCGATCAATGGGAATGAATCGACTCCGT
TTTTCTTCAACTGGAACACGGTGACCACTCAGTGCTTTTGCTGCGGTGGA
GAATGTACTTTGATTCTTGACCCTGATTTCAATGCCTTCAAGGTGGTCGA
GGCCGCTACTGGGGCTCCCTCTGCGTCGCCCTCAAGCAGCCCTTCGGCTT
CTCCCTCGGGCAGCCCTACAACTGCCCCTACCGCGAGCCCATCTTCATCG
CCATCTGCATCTGCCTCGGGCAGTCCGACCCAATCTCCAACGGCCACGCC
TACTACATCCCCGACTGCCACGCCTACGACAGCCCCGACGGCCACGCCTA
CTACATCTCCGACGGCGAATAGTCCAATTTGA
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protein sequence of NO11G00140.1

>NO11G00140.1-protein ID=NO11G00140.1-protein|Name=NO11G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MSRCEPGALFHNAVLLQLVGSINHGHTHGILDERGHGNSLDVNCMVRTFL
QHNRKEAREVPLSVTGELPVGTNPAGSIHEEWMRRINQKAWGKLTYVDHR
AATIHAQGSLNKRKHLGMDMEVVRVDRDEVASAKCMNGLRRAIRHDHECV
LVEARLNSVAVGDAVGVAVGEVVGVAVGEAEGEAEGLLEGDESSKRVFQA
VVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKT
GKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLS
ALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNT
VTTQCFCCGGECTLILDPDFNAFKVVEAATGAPSASPSSSPSASPSGSPT
TAPTASPSSSPSASASGSPTQSPTATPTTSPTATPTTAPTATPTTSPTAN
SPI*
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Synonyms
Publications