NO10G04060, NO10G04060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G04060 vs. NCBI_GenBank
Match: EWM25611.1 (origin recognition complex subunit 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 439.1 bits (1128), Expect = 3.700e-119 Identity = 240/351 (68.38%), Postives = 255/351 (72.65%), Query Frame = 0 Query: 672 PLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFF----XXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDLKRRLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLVDIILINQAARELQQKPIFKAVQDGLTDAQVLLLIAIIRSTLDSGR 1019 P SS+ ASSRGGLYIAGFPGTGKTATVHHVL RLR+ERRDLGFTHCEINGLTLSN +QAY LLWAALTDQREA + PARAL+KL+DFF LDEMDYLVGKSLHTMEGKVIYN LEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASIL+TRLGGLVP+VIDDQCIQMCSRKVANVSGDLRKAFQVCR+AIDLKRR LS PLVDI LINQAARELQ+KPIF+AVQ+GLTDAQVL+LI IIRST++SGR Sbjct: 4 PSSSTSASSRGGLYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERK-------------------PLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 335
BLAST of NO10G04060 vs. NCBI_GenBank
Match: XP_005855377.1 (origin recognition complex subunit 1 [Nannochloropsis gaditana CCMP526] >EKU20976.1 origin recognition complex subunit 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 298.9 bits (764), Expect = 6.000e-77 Identity = 162/230 (70.43%), Postives = 171/230 (74.35%), Query Frame = 0 Query: 789 MDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDLKRRLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLVDIILINQAARELQQKPIFKAVQDGLTDAQVLLLIAIIRSTLDSGR 1019 MDYLVGKSLHTMEGKVIYN LEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASIL+TRLGGLVP+VIDDQCIQMCSRKVANVSGDLRKAFQVCR+AIDLKRR LS PLVDI LINQAARELQ+KPIF+AVQ+GLTDAQVL+LI IIRST++SGR Sbjct: 1 MDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERK-------------------PLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 211
BLAST of NO10G04060 vs. NCBI_GenBank
Match: XP_005764548.1 (hypothetical protein EMIHUDRAFT_104391 [Emiliania huxleyi CCMP1516] >EOD12119.1 hypothetical protein EMIHUDRAFT_104391 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 165.2 bits (417), Expect = 1.000e-36 Identity = 112/280 (40.00%), Postives = 142/280 (50.71%), Query Frame = 0 Query: 633 LPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDLKRR 913 LPCRE+E +E+ L +A+S LYI+G PGTGKTATVHH L L ER F E+NG+ LS+ Q Y LLW LT Q + ARA L F LDE+DYLV T VIYNL EW G L L+G+SNT+DLPER++ PRV SRL +RRV F PYSH ++A+I+ RL GL + + +++C+RKVA VSGD+R+A +VCR A L R Sbjct: 362 LPCREKEREELTTALRSAISG------------------------GGKGTSLYISGTPGTGKTATVHHALRLLAAERGLPPFRTLEVNGMKLSSPQQVYSLLWEGLTGQHAS---VARAQQLLDKRF---------SAPSKKRRCGAEVVVLLLDELDYLV-----TRTQSVIYNLFEWAT---SGHAPLALIGISNTMDLPERLL-PRVHSRLGIRRVSFLPYSHSEIAAIIADRLTGL--DAFEPKGVELCARKVAAVSGDIRRALEVCRLAAQLAER 594
BLAST of NO10G04060 vs. NCBI_GenBank
Match: KOO21425.1 (origin recognition complex subunit 1 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 160.2 bits (404), Expect = 3.300e-35 Identity = 113/308 (36.69%), Postives = 153/308 (49.68%), Query Frame = 0 Query: 607 LALLSQAEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFF--XXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDLKRR 913 L S+A ARL S+ P +PCRE+E EV+ L AA+ + + G LYI+G PGTGKTATVH L L + R L F +NG+ +S Q Y LLW LT Q + P+RAL L F LDE+DYLV T V+YNL EW + L+++G+SNT+DLPER++ PRV+SRL++RRV F PY + SI+ RLG L D +++C+RKVA+V+GD+R+A +VCR A + R Sbjct: 217 LGRFSEAAARLAPSAVP-------ERMPCREKERAEVIATLRAAVLE------------------------GALGGSLYISGTPGTGKTATVHQALRELTAD-RTLQFRSIFVNGMKMSTPFQVYALLWEGLTGQ---AVKPSRALELLERRFAAPTTSRLSFSKAVQQRRKGASEKVILILDELDYLV-----TSRQSVLYNLFEWSTRANA---ALVVVGISNTMDLPERLL-PRVESRLNIRRVNFHPYDRSALESIITDRLGTLDAFAAGDGGLELCARKVASVTGDVRRALEVCRLATQIAER 480
BLAST of NO10G04060 vs. NCBI_GenBank
Match: XP_003710500.1 (origin recognition complex subunit 1 [Magnaporthe oryzae 70-15] >EHA57888.1 origin recognition complex subunit 1 [Magnaporthe oryzae 70-15] >ELQ36977.1 origin recognition complex subunit 1 [Magnaporthe oryzae Y34]) HSP 1 Score: 154.5 bits (389), Expect = 1.800e-33 Identity = 114/302 (37.75%), Postives = 153/302 (50.66%), Query Frame = 0 Query: 613 AEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRL----RKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRG-LILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDL 910 A A+LH++S P SLPCRE E EV LEAA++D T S +YI+G PGTGKTATV V+ L R + D F EING+ +S+ QAY LLW AL QR + PA+AL L F +DE+D LV K+ +G V+YN W G R LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+++RL G+ ++D IQ SRKVA VSGD R+A +CR A++L Sbjct: 330 ARAQLHVASVP-------TSLPCREAEFSEVYSHLEAAITD--------GTGSC-----------------IYISGTPGTGKTATVREVVASLDHAVRNDELD-DFIFVEINGMKVSDPHQAYSLLWEALKGQR---VSPAQALDLLEREF-------------SNPSPRRVPCVVLMDELDQLVTKN----QG-VMYNFFNW----PGLRHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHEQLMKIIQSRLEGVPGNIVDPDAIQFASRKVAAVSGDARRALDICRRAVEL 573
BLAST of NO10G04060 vs. NCBI_GenBank
Match: ELQ68658.1 (origin recognition complex subunit 1, partial [Magnaporthe oryzae P131]) HSP 1 Score: 154.5 bits (389), Expect = 1.800e-33 Identity = 114/302 (37.75%), Postives = 153/302 (50.66%), Query Frame = 0 Query: 613 AEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRL----RKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRG-LILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDL 910 A A+LH++S P SLPCRE E EV LEAA++D T S +YI+G PGTGKTATV V+ L R + D F EING+ +S+ QAY LLW AL QR + PA+AL L F +DE+D LV K+ +G V+YN W G R LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+++RL G+ ++D IQ SRKVA VSGD R+A +CR A++L Sbjct: 163 ARAQLHVASVP-------TSLPCREAEFSEVYSHLEAAITD--------GTGSC-----------------IYISGTPGTGKTATVREVVASLDHAVRNDELD-DFIFVEINGMKVSDPHQAYSLLWEALKGQR---VSPAQALDLLEREF-------------SNPSPRRVPCVVLMDELDQLVTKN----QG-VMYNFFNW----PGLRHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHEQLMKIIQSRLEGVPGNIVDPDAIQFASRKVAAVSGDARRALDICRRAVEL 406
BLAST of NO10G04060 vs. NCBI_GenBank
Match: KFO76906.1 (Origin recognition complex subunit 1, partial [Cuculus canorus]) HSP 1 Score: 153.3 bits (386), Expect = 4.100e-33 Identity = 103/306 (33.66%), Postives = 154/306 (50.33%), Query Frame = 0 Query: 607 LALLSQAEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRKERRD---LGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDL 910 +++L +A RLH+S++P SLPCRE E Q++ F+E+ L D + G +YI+G PGTGKTATVH V+ RL++ D F E+NG+ L+ QAY + LT Q+ A LAKL + +DE+D L T + V+YNL +W A + LI+L ++NT+DLPERVM R+ SRL L R+ F+PY++ Q+ I+ +RL + + ++ IQ+ SRKVA +SGD R+ +CR A ++ Sbjct: 489 VSILEEARLRLHVSATP-------ESLPCREEEFQDIFNFVESKLID-------------------------GTGGCMYISGVPGTGKTATVHEVIRRLQQAAEDDDLPPFQFVEVNGMKLTEPHQAYVQILELLTGQKVTAAHAAVLLAKLFN----------------APGPKRKPTVLVVDELDL-----LWTRKQDVLYNLFDWPA---QKQSKLIVLAIANTMDLPERVMMNRIASRLGLTRMSFQPYTYQQLQQIISSRLNSM--KAFEEDAIQLVSRKVAALSGDARRCLDICRRATEI 736
BLAST of NO10G04060 vs. NCBI_GenBank
Match: KFV58501.1 (Origin recognition complex subunit 1 [Tyto alba]) HSP 1 Score: 153.3 bits (386), Expect = 4.100e-33 Identity = 106/305 (34.75%), Postives = 152/305 (49.84%), Query Frame = 0 Query: 608 ALLSQAEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRK--ERRDL-GFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDL 910 ++L +A RLH+S+ P SLPCRE E Q++ F+E+ L D + G +YI+G PGTGKTATVH V+ L++ E DL F EING+ L++ QAY + LT Q+ A LAKL +DE+D L T + V+YNL +W LI+L ++NT+DLPER+M RV SRL L R+ F+PY++ Q+ I+ +RL G+ R ++ IQ+ SRKVA +SGD R+ +CR A ++ Sbjct: 482 SILEEARLRLHVSAVP-------ESLPCREEEFQDIYNFVESKLID-------------------------GTGGCMYISGVPGTGKTATVHEVISSLQQAAENDDLPSFQFVEINGMKLTDPHQAYVQILELLTGQKVTATHAAVLLAKL----------------FSTPGPKRKTTVMVVDELDL-----LWTRKQNVMYNLFDWPT---QKHSKLIILAIANTMDLPERIMMNRVASRLGLTRMSFQPYTYKQLQQIISSRLNGM--RAFEEDAIQLVSRKVAALSGDARRCLDICRRATEI 728
BLAST of NO10G04060 vs. NCBI_GenBank
Match: XP_009560195.1 (PREDICTED: origin recognition complex subunit 1 [Cuculus canorus]) HSP 1 Score: 153.3 bits (386), Expect = 4.100e-33 Identity = 103/306 (33.66%), Postives = 154/306 (50.33%), Query Frame = 0 Query: 607 LALLSQAEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRKERRD---LGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDL 910 +++L +A RLH+S++P SLPCRE E Q++ F+E+ L D + G +YI+G PGTGKTATVH V+ RL++ D F E+NG+ L+ QAY + LT Q+ A LAKL + +DE+D L T + V+YNL +W A + LI+L ++NT+DLPERVM R+ SRL L R+ F+PY++ Q+ I+ +RL + + ++ IQ+ SRKVA +SGD R+ +CR A ++ Sbjct: 480 VSILEEARLRLHVSATP-------ESLPCREEEFQDIFNFVESKLID-------------------------GTGGCMYISGVPGTGKTATVHEVIRRLQQAAEDDDLPPFQFVEVNGMKLTEPHQAYVQILELLTGQKVTAAHAAVLLAKLFN----------------APGPKRKPTVLVVDELDL-----LWTRKQDVLYNLFDWPA---QKQSKLIVLAIANTMDLPERVMMNRIASRLGLTRMSFQPYTYQQLQQIISSRLNSM--KAFEEDAIQLVSRKVAALSGDARRCLDICRRATEI 727
BLAST of NO10G04060 vs. NCBI_GenBank
Match: XP_009971043.1 (PREDICTED: origin recognition complex subunit 1 [Tyto alba]) HSP 1 Score: 153.3 bits (386), Expect = 4.100e-33 Identity = 106/305 (34.75%), Postives = 152/305 (49.84%), Query Frame = 0 Query: 608 ALLSQAEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAALSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRK--ERRDL-GFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDL 910 ++L +A RLH+S+ P SLPCRE E Q++ F+E+ L D + G +YI+G PGTGKTATVH V+ L++ E DL F EING+ L++ QAY + LT Q+ A LAKL +DE+D L T + V+YNL +W LI+L ++NT+DLPER+M RV SRL L R+ F+PY++ Q+ I+ +RL G+ R ++ IQ+ SRKVA +SGD R+ +CR A ++ Sbjct: 482 SILEEARLRLHVSAVP-------ESLPCREEEFQDIYNFVESKLID-------------------------GTGGCMYISGVPGTGKTATVHEVISSLQQAAENDDLPSFQFVEINGMKLTDPHQAYVQILELLTGQKVTATHAAVLLAKL----------------FSTPGPKRKTTVMVVDELDL-----LWTRKQNVMYNLFDWPT---QKHSKLIILAIANTMDLPERIMMNRVASRLGLTRMSFQPYTYKQLQQIISSRLNGM--RAFEEDAIQLVSRKVAALSGDARRCLDICRRATEI 728 The following BLAST results are available for this feature:
BLAST of NO10G04060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G04060 ID=NO10G04060|Name=NO10G04060|organism=Nannochloropsis oceanica|type=gene|length=6273bpback to top protein sequence of NO10G04060.4 >NO10G04060.4-protein ID=NO10G04060.4-protein|Name=NO10G04060.4|organism=Nannochloropsis oceanica|type=polypeptide|length=1019bpback to top protein sequence of NO10G04060.3 >NO10G04060.3-protein ID=NO10G04060.3-protein|Name=NO10G04060.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1019bpback to top protein sequence of NO10G04060.2 >NO10G04060.2-protein ID=NO10G04060.2-protein|Name=NO10G04060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1073bpback to top protein sequence of NO10G04060.1 >NO10G04060.1-protein ID=NO10G04060.1-protein|Name=NO10G04060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1112bpback to top Synonyms
Publications
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