NO10G04060.1, NO10G04060.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G04060.1
Unique NameNO10G04060.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3434
Alignment locationchr10:1211595..1217867 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1211595..1217867 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO10G04060.1 vs.
Match: EWM25611.1 (origin recognition complex subunit 1, partial [Nannochloropsis gaditana])

HSP 1 Score: 484.6 bits (1246), Expect = 8.400e-133
Identity = 265/351 (75.50%), Postives = 293/351 (83.48%), Query Frame = 0 
Query:  672 PLSSSPASSRGGLYIAGFPGTGKTATVHHVLGRLRKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPARALAKLSDFFTSS----RTAASASSSAASRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAFQVCRHAIDLKRRLLSASADATAAAAAAETSSSSPSTNKENVAAAPNPHAPVPVPAAAGEGGGKEKEKLKGPLVDIILINQAARELQQKPIFKAVQDGLTDAQVLLLIAIIRSTLDSGR 1019
            P SS+ ASSRGGLYIAGFPGTGKTATVHHVL RLR+ERRDLGFTHCEINGLTLSN +QAY LLWAALTDQREA + PARAL+KL+DFFT      R+  S++S + SRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYN LEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASIL+TRLGGLVP+VIDDQCIQMCSRKVANVSGDLRKAFQVCR+AIDLKRR LS+ +   ++ AA E +    +                  PA++     KE E+ K PLVDI LINQAARELQ+KPIF+AVQ+GLTDAQVL+LI IIRST++SGR
Sbjct:    4 PSSSTSASSRGGLYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGA------------------PASSPGADRKEVEERK-PLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 335
The following BLAST results are available for this feature:
BLAST of NO10G04060.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25611.18.400e-13375.50origin recognition complex subunit 1, partial [Nan... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G04060NO10G04060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G04060.1NO10G04060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G04060.1.cds1NO10G04060.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds2NO10G04060.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds3NO10G04060.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds4NO10G04060.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds5NO10G04060.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds6NO10G04060.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds7NO10G04060.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds8NO10G04060.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds9NO10G04060.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds10NO10G04060.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds11NO10G04060.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds12NO10G04060.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds13NO10G04060.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds14NO10G04060.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds15NO10G04060.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds16NO10G04060.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds17NO10G04060.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04060.1.cds18NO10G04060.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G04060.1 ID=NO10G04060.1|Name=NO10G04060.1|organism=Nannochloropsis oceanica|type=mRNA|length=3434bp
ATGAAAGGGGACGCTACTTCACCTCTGACGCGTCGTTTCCGAATAACGGG
GGTGCAAACAGTCTTCTGTACTACAGCAGCGAGCGGTGGTCCTAATTTCC
GACCCGCGTCCTCTTATCATGCCTCCTCCCCGTCCTTGCAGACCCGGCTG
GGAATGGGGGAGCCTCCGGTGGCCCCGACTGCCATTACCGCCGCCACCAC
CCTTTCTACTACCGCTGCTGCCTGCTCCTCGAGCCAAAGGACAGGCGCTT
CCACAGCCTCAACCTCGACGGCTGCCACTACTAGTACCTCTTATTGCGGG
AGTGCTCCGGGTTATACAGAGGGGAGCAGCAGTGAGGAGGAAGAGGAAGG
AGGAGGGGGAGGAAAGCTCGCAGGGGCGGAAGCAACCTATGCAGCTTCTA
GTACGCGTACCTGTACTGATGCAGCTGTCGCTACCAATATATCAACAGCG
GCGGCAACGGCAGCACCATCGATGCGCGGAAGAAGAGGTAGCAACACCAG
CAGCAGAAGGGGGAGCGGGAGAGATAGTCGCGGAAACTCCCCGTGTCGCT
CCGTCGCCTCCTCCTCCTCGTCCTACCTGCAGGTGGACTCGGAGGAAGAT
GAGGAGGAGGATATCGAAGAGCAACGGCAACAGCGGTTGCAGCTCCAGGA
ACGATTGCAGCAGCAACGGTTGGAAAAGGCCTTGCAGCGTCAGCAGCAAA
AGCAGCAGCAGCAGCAGCGTGAGGAAGAAGACAGGGGGGAGCAGCACCAC
GAAAAGGAGCCAATAGGGGAAGAGGAAGACGAAGGGATGGAGCTCAGCCA
AGACCAGAATGAATATGGACGGGGGAAGGGGGGAATAGAGGGGGAAGGAG
AGGAGGAGGAAGAGGAGGAAAGCGAGGGAGTCCCGGCAGAACTGGTGGGG
CCTATAGGGGAAGGCTTGGAGGGCGATCAGTACTTCGAGGCCGTGATTTG
GCAGGGCCAACTCTTCAGGATGGGGGACTGTGTTGAGGTGCTTTTGGATG
GCTCGGGCAAAGAGGAGGCGACTACGGGCTATGCCGAGATCTTGTGGCTG
TGGCGGTCGGCGGCGGTGGCGGTGCAGGAAGAGCCTTCCTCGGACGCCGG
CTTCTCCTCTTCCTCCGACGACGACGACTACGACAAGGAGGAAAGTGACG
CACCCTCGTCTTCTTCCCTTCCTCCTCCTCCCACCTCCTGCGCCTCCTCG
CAAGAGGGCGAGGCCATGATGGAAGTGAGGTGGTTTTGGTCGCCCCAAGA
GCTGTTGGTCAAGAAGGAGGACCGGACGCAGTGCCTGCTTCGAGAGCTGT
TCGAGAGCGACCGCGTGGATGAGATACCGGTGCAATCCATCAACGACCGT
ATTCGTGTCGTCGCGCCCCGTGCTCGAGGGCAGAGCAGGAGGGAGGCCTG
GGGGCAGGAAGCGGAGGAGGAAGAGGTGTTTGTCTGCCGCCGGCTATACC
ACTCCACGCGCGCAGCCTTTCTGCCTCTGGGCCCGAAAGCCATGCTGCCC
GAGGCACGTCGAACACGTGGCATGAATTACTCGGCCCGGCGAGATCAAAC
CCCCCTCTTGCGAGTGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTGTG
CCGGCAGCTGTAGTGCTGCGGTCGACAAGACGGGAGGGAAAAGGAACCGA
AATGAGGAGGAGGGGGAGGAGGATGAGGGGCAGGAGGGGGAGGAGAAGGG
AGCGGGCGAGGGTGAGGATGCGGGAGAGGATGGCAGGAATAAGACCGGGA
AGAAGAAAGAGAGGAAGGGAGGGAGGGAGGGGGGGAGGGAGGGACGACTC
GAGGAGGAGAGTGAGGAACTCGCTCTCCTTTCGCAGGCGGAGGCCCGGCT
GCATTTGTCGTCGTCCCCCTGGAGTACTGCCACTAAGGCGGCGTCCTTGC
CGTGCCGAGAGCGGGAGACGCAGGAGGTGATGGAGTTCCTCGAGGCCGCC
CTCTCCGATTTCTACCAAGCCCGTCAACCTTCCTCCACCTCTTCCTCTCT
TGCTTCCTCCCTCCCCCTTTCCTCCTCACCCGCCTCGTCAAGAGGGGGCT
TGTATATTGCGGGCTTCCCGGGAACGGGCAAGACTGCCACGGTACACCAC
GTGTTGGGGCGGCTGAGAAAAGAGAGGCGAGACTTGGGCTTCACGCACTG
CGAGATTAATGGCCTCACGCTCTCTAATTCGTCGCAGGCCTACCCTCTGC
TATGGGCCGCTCTGACTGACCAGCGTGAGGCGGGCATGCCTCCTGCCCGG
GCCCTGGCCAAGCTCTCGGACTTCTTCACGAGTTCTCGGACTGCTGCCTC
TGCCTCGTCCTCGGCCGCCTCCCGCCAACGCCGCGCCCGGCCGGTGGTGG
TGGTGCTCGACGAGATGGACTATTTGGTGGGCAAGAGCCTGCACACCATG
GAGGGGAAGGTCATTTACAATTTGCTCGAGTGGGGTGCAGGAGGGGACGG
AGGGCGGCGGGGGCTCATTCTGCTGGGCCTTTCCAACACCGTGGACCTGC
CCGAGCGAGTCATGCAGCCACGAGTGCAGTCCCGCCTATCCCTCCGACGC
GTCCGCTTTGAGCCTTACTCCCACCTGCAGGTGGCGAGTATCTTGAAAAC
TCGGTTGGGCGGGCTCGTGCCGCGCGTGATCGATGACCAGTGCATTCAGA
TGTGTAGTCGCAAAGTGGCCAACGTCTCGGGGGACCTGCGGAAGGCCTTC
CAGGTCTGTCGTCACGCCATAGACCTCAAGCGCCGGCTCCTCTCCGCTTC
CGCTGATGCTACTGCTGCTGCTGCTGCTGCTGAAACCTCCTCCTCTTCGC
CTAGCACCAACAAGGAAAATGTTGCTGCTGCTCCGAACCCTCACGCTCCG
GTACCTGTCCCTGCAGCTGCTGGAGAGGGAGGTGGGAAAGAGAAGGAGAA
GCTGAAGGGGCCCTTGGTCGACATTATCCTGATCAACCAGGCCGCCCGTG
AGCTGCAGCAAAAACCCATTTTCAAGGCTGTGCAAGATGGACTGACCGAC
GCCCAGGTTCTTCTCCTCATTGCCATCATCCGCAGCACCCTCGACAGTGG
AAGGCTAGAAGCATCCATGCCCGAAGTGTACCGGCGGTGGCGCACCTCTC
TCTCCAAGATGAATCTGCATCCTCCCTCCCTGACCCCTTGCTACGGCGAG
GCCGTGGAGGTGGCCCAGCGCCTGGCCCTCGACGGCTTCCTTCGCCTGAG
TAAGACCGAGCAGGCGTGGGCGCCTTTTGTTACGCTCCAGTTGCAGTCGG
CGGACGTGGCCGAGGCCGTGCGCAAGGGTCGGCCCAAGGCAATGTACGAG
CTGCTGCCCAGCGAGCTCCGGGAGTGGAGCCACTGAGGATAGGGAGGAAG
GAAAGAAGGGAGGGATGATGGGAAGGACTGAACACAAAACAAAAGAAACC
CAAAGTACGCTCAAATCCAATGGCCAATGTCCCC
back to top

protein sequence of NO10G04060.1

>NO10G04060.1-protein ID=NO10G04060.1-protein|Name=NO10G04060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1112bp
MKGDATSPLTRRFRITGVQTVFCTTAASGGPNFRPASSYHASSPSLQTRL
GMGEPPVAPTAITAATTLSTTAAACSSSQRTGASTASTSTAATTSTSYCG
SAPGYTEGSSSEEEEEGGGGGKLAGAEATYAASSTRTCTDAAVATNISTA
AATAAPSMRGRRGSNTSSRRGSGRDSRGNSPCRSVASSSSSYLQVDSEED
EEEDIEEQRQQRLQLQERLQQQRLEKALQRQQQKQQQQQREEEDRGEQHH
EKEPIGEEEDEGMELSQDQNEYGRGKGGIEGEGEEEEEEESEGVPAELVG
PIGEGLEGDQYFEAVIWQGQLFRMGDCVEVLLDGSGKEEATTGYAEILWL
WRSAAVAVQEEPSSDAGFSSSSDDDDYDKEESDAPSSSSLPPPPTSCASS
QEGEAMMEVRWFWSPQELLVKKEDRTQCLLRELFESDRVDEIPVQSINDR
IRVVAPRARGQSRREAWGQEAEEEEVFVCRRLYHSTRAAFLPLGPKAMLP
EARRTRGMNYSARRDQTPLLRVPPPSLPPSLPCAGSCSAAVDKTGGKRNR
NEEEGEEDEGQEGEEKGAGEGEDAGEDGRNKTGKKKERKGGREGGREGRL
EEESEELALLSQAEARLHLSSSPWSTATKAASLPCRERETQEVMEFLEAA
LSDFYQARQPSSTSSSLASSLPLSSSPASSRGGLYIAGFPGTGKTATVHH
VLGRLRKERRDLGFTHCEINGLTLSNSSQAYPLLWAALTDQREAGMPPAR
ALAKLSDFFTSSRTAASASSSAASRQRRARPVVVVLDEMDYLVGKSLHTM
EGKVIYNLLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRR
VRFEPYSHLQVASILKTRLGGLVPRVIDDQCIQMCSRKVANVSGDLRKAF
QVCRHAIDLKRRLLSASADATAAAAAAETSSSSPSTNKENVAAAPNPHAP
VPVPAAAGEGGGKEKEKLKGPLVDIILINQAARELQQKPIFKAVQDGLTD
AQVLLLIAIIRSTLDSGRLEASMPEVYRRWRTSLSKMNLHPPSLTPCYGE
AVEVAQRLALDGFLRLSKTEQAWAPFVTLQLQSADVAEAVRKGRPKAMYE
LLPSELREWSH*
back to top

mRNA from alignment at chr10:1211595..1217867-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G04060.1 ID=NO10G04060.1|Name=NO10G04060.1|organism=Nannochloropsis oceanica|type=mRNA|length=6273bp|location=Sequence derived from alignment at chr10:1211595..1217867- (Nannochloropsis oceanica)
ATGAAAGGGGACGCTACTTCACCTCTGACGCGTCGTTTCCGAATAACGGG
GGTGCAAACAGTCTTCTGTACTACAGCAGCGAGCGGTGGTCCTAATTTCC
GACCCGCGTCCTCTTATCATGCCTCCTCCCCGTCCTTGCAGGTACAGTCA
TCCCGGACGGGAAACGGGGCCATCTCGAGAAGCCGGAGGATGGCGGGCAC
TTTTTTTTAACGTCTCTTTTGTCCTTTGTTTCGATACCTTCCTCTCTTCT
CTCCTTCCCCCTTCCTCGACGAACCAAGGCAGAGGCACATCACGACGTTT
CGACAAATGCACGTGTTAAGCAAGGGAGCAAGTCCCACCAGTTTTGGCAC
AATATTAAACTAGGCGACACCTCATCCCTCGTCTTCTTTATTCTCATTCT
TCTTCACCTCTTGTCCATCCCAACATACAGACCCGGCTGGGAATGGGGGA
GCCTCCGGTGGCCCCGACTGCCATTACCGCCGCCACCACCCTTTCTACTA
CCGCTGCTGCCTGCTCCTCGAGCCAAAGGACAGGCGCTTCCACAGCCTCA
ACCTCGACGGCTGCCACTACTAGTACCTCTTATTGCGGGAGTGCTCCGGG
TTATACAGAGGGGAGCAGCAGTGAGGAGGAAGAGGAAGGAGGAGGGGGAG
GAAAGCTCGCAGGGGCGGAAGCAACCTATGCAGCTTCTAGTACGCGTACC
TGTACTGATGCAGCTGTCGCTACCAATATATCAACAGCGGCGGCAACGGC
AGCACCATCGATGCGCGGAAGAAGAGGTAGCAACACCAGCAGCAGAAGGG
GGAGCGGGAGAGATAGTCGCGGAAACTCCCCGTGTCGCTCCGTCGCCTCC
TCCTCCTCGTCCTACCTGCAGGTGGACTCGGAGGAAGATGAGGAGGAGGA
TATCGAAGAGCAACGGCAACAGCGGTTGCAGCTCCAGGAACGATTGCAGC
AGCAACGGTTGGAAAAGGCCTTGCAGCGTCAGCAGCAAAAGCAGCAGCAG
CAGCAGCGTGAGGAAGAAGACAGGGGGGAGCAGCACCACGAAAAGGAGCC
AATAGGGGAAGAGGAAGACGAAGGGATGGAGCTCAGCCAAGACCAGAATG
AATATGGACGGGGGAAGGGGGGAATAGAGGGGGAAGGAGAGGAGGAGGAA
GAGGAGGAAAGCGAGGGAGTCCCGGCAGAACTGGTGGGGCCTATAGGGGA
AGGCTTGGAGGGCGATCAGTACTTCGAGGCCGTGATTTGGCAGGTAGGGA
CTGTGATGGAAAGAAGGCGGGAGGGCGGGAGGGAGAGAGATACCTCCTCA
GGGAAAGTCGCTTTGTGTGAGATGATTGGTACATTCAGATAGTGGAACAA
AAGCCTTCCTCCCTCCTCACCCTCCTTCCCTCCATCCCTCGCTCTCTCCT
CCCCCAAGGGCCAACTCTTCAGGATGGGGGACTGTGTTGAGGTGCTTTTG
GATGGCTCGGGCAAAGAGGAGGCGACTACGGGCTATGCCGAGATCTTGTG
GCTGTGGCGGTCGGCGGCGGTGGCGGTGCAGGAAGAGGTATATGGAGGGA
GGGGAGGAGGGAGAGAAGGAGAGAGCGCAGTGAGCGTAAGGGGAAACTTA
ATGTAAATATGTATTTATCGGGAATGCCCTTCGGCTGAGGCTAAGTTAGG
AACATGAATTGCTGTCTCAGGATCATCGGTGATTGTCATTTACCCTCTTC
CTTCCCATTACAGCCTTCCTCGGACGCCGGCTTCTCCTCTTCCTCCGACG
ACGACGACTACGACAAGGAGGAAAGTGACGCACCCTCGTCTTCTTCCCTT
CCTCCTCCTCCCACCTCCTGCGCCTCCTCGCAAGAGGGCGAGGCCATGAT
GGAAGTGAGGTGGTTTTGGTCGCCCCAAGAGCTGTTGGTCAAGAAGGAGG
ACCGGACGCAGTGCCTGCTTCGAGAGCTGTTCGAGAGCGACCGCGTGGAT
GAGATACCGGTGGTAAGGAGGGAGGGAGGGAGGGAGAGGGAGGGGGGGGG
ATGTAAGAGGGAGGAGAGGGCCCACCCGGAGCCTGAATTGAAATGTGTTT
GAAAACGACCGCGTGGATGAGATACCAGTCTAAGCGCCTTCCCTCCCTCC
CTCCCTCCCTCCCTCTCCCTCTCTTACCCTCCGAACTCTCTTCCATTCAT
TCTCTCCATCCCTGCTCCCTGCCCCCCTACCTCCCTTCCACAGCAATCCA
TCAACGACCGTATTCGTGTCGTCGCGCCCCGTGCTCGAGGGCAGAGCAGG
AGGGAGGCCTGGGGGCAGGAAGCGGAGGAGGAAGAGGTGTTTGTCTGCCG
CCGGCTATACCACTCCACGCGCGCAGCCTTTCTGCCTCTGGGCCCGAAAG
CCATGCTGCCCGAGGTAGGGAGGGAGGAAGGGAGGGAGGGAGGGGCGTGC
CAGGAAAGTCGATCTTTCTTTGGCCCGCCGAGACACATTTTGACTCTCTT
CCCTCCTTCCTTCCCTCCCTCCTTCCTTTCCCCTCTTCCCTAGGCACGTC
GAACACGTGGCATGAATTACTCGGCCCGGCGAGATCAAACCCCCCTCTTG
CGAGTGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTGTGCCGGCAGCTG
TAGTGCTGCGGTCGACAAGACGGGAGGGAAAAGGAACCGAAATGAGGAGG
AGGGGGAGGAGGATGAGGGGCAGGAGGGGGAGGAGAAGGGAGCGGGCGAG
GGTGAGGATGCGGGAGAGGATGGCAGGAATAAGACCGGGAAGAAGAAAGA
GAGGAAGGGAGGGAGGGAGGGGGGGAGGGAGGGACGACTCGAGGAGGAGA
GTGAGGAACTCGCTCTCCTTTCGCAGGCGGAGGCCCGGCTGCATTTGTCG
TCGTCCCCCTGGAGTACTGCCACTAAGGCGGCGTCCTTGCCGTGCCGAGA
GCGGGAGACGCAGGAGGTGAGGGAGGGAGGAAGGGAGGGATGGGGAGGGA
GGGGACGTACGCTGCGGACGTATTGATTTGTGTCTTATCATACAATCTCT
TTTTGACTACTCATGCTTTTGGCCATTCGCGTTTCTTCCCTCCCTCCCCT
CCATCTCTCCCTCCCTCCTCTTCTTACAGGTGATGGAGTTCCTCGAGGCC
GCCCTCTCCGATTTCTACCAAGCCCGTCAACCTTCCTCCACCTCTTCCTC
TCTTGCTTCCTCCCTCCCCCTTTCCTCCTCACCCGCCTCGTCAAGAGGGG
GCTTGTATATTGCGGGCTTCCCGGGAACGGGTACGGGAGTAAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGGCTAGGACAAGTATAATAGAGTGCTCC
CTTCTCAATGTTCTTACCTTTTCTTCCTCCCTTCCTCCCTCCCTAGGCAA
GACTGCCACGGTACACCACGTGTTGGGGCGGCTGAGAAAAGAGAGGCGAG
ACTTGGGCTTCACGCACTGCGAGATTAATGGCCTCACGCTCTCTAATTCG
TCGCAGGTCAAGAGGAAGAGGAAGGAGGGCGGGAGGGCGGGAAGGAGGAC
GATGCTCCGGAGTCTGCGGCGAAACCAATGGAATGCTGCGTCTTAGCCCA
CCACCTGACCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCTCTAACA
GGCCTACCCTCTGCTATGGGCCGCTCTGACTGACCAGCGTGAGGCGGGCA
TGCCTCCTGCCCGGGCCCTGGCCAAGCTCTCGGACTTCTTCACGAGTTCT
CGGACTGCTGCCTCTGCCTCGTCCTCGGTGGGTATTGGGGAAGAAGGGAG
GAAAGGAGGGAAGAAGAGGGAAGGAGGGGAAGAGACTCTGCCCGTACACC
GCTCTAACACTCACCCATCGACCACGTCCTCTCCCCCTCCTCTCAGGCCG
CCTCCCGCCAACGCCGCGCCCGGCCGGTGGTGGTGGTGCTCGACGAGATG
GACTATTTGGTGGGCAAGAGCCTGCACACCATGGAGGGGAAGGTAGGTAG
GTAGGTAGGTAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGAAATTGTCCC
GTTTCAGGTGGTGCCGATAGGGACAGTGTATTCGGCTGAGGGCAGGGAGA
GGGAAAATGCGTCCACGTACTCCTCCTTGACCATCCGTCCCCCCCCCCCT
TCCTCCCAAGGTCATTTACAATTTGCTCGAGTGGGGTGCAGGAGGGGACG
GAGGGCGGCGGGGGCTCATTCTGCTGGGCCTTTCCAACACCGTGGACCTG
CCCGAGCGAGTCATGCAGGTAGGGAGGGAGGGAGGGCGGGAGGGAGGGTA
CGGGGGATGGGGGAGTGTAAGAGGAATGGAAATAGAGCATGTCTCACTCA
TACGTCTTCTCTGTATCCTTTATCTTGTTGCGCCCGTCCAGCCACGAGTG
CAGTCCCGCCTATCCCTCCGACGCGTCCGCTTTGAGCCTTACTCCCACCT
GCAGGTAGTTGGGAGGGGGCAAGGAGGGAGGGGAAGGGGAAGAAGGGAAA
GAGGGAGGGAAGAGAAGGAGGATGGGAGGAGAGAAATACTCGCGGATTTC
AACTCTCCACCAACAACGCCCCCTGCCTCCTTCCCTCCCTCTCTCCTTCC
CTCCCTCCCTGGCTGCCTTTTGCAGGTGGCGAGTATCTTGAAAACTCGGT
TGGGCGGGCTCGTGCCGCGCGTGATCGATGACCAGTGCATTCAGATGTGT
AGTCGCAAAGTGGCCAACGTCTCGGGGGACCTGCGGAAGGCCTTCCAGGT
AGAGAGGGAGGGAGGGAGGGAGGGCAAAGGAGAGGGAGAGAGAGAGGGAG
AAAGAGAGAGGACAAGGAACCGCGCCCGCATCCGCAAATCACTCCTCTCC
ATCATCATGATTCACTAGGTCTGTCGTCACGCCATAGACCTCAAGCGCCG
GCTCCTCTCCGCTTCCGCTGATGCTACTGCTGCTGCTGCTGCTGCTGAAA
CCTCCTCCTCTTCGCCTAGCACCAACAAGGAAAATGTTGCTGCTGCTCCG
AACCCTCACGCTCCGGTACCTGTCCCTGCAGCTGCTGGAGAGGGAGGTGG
GAAAGAGAAGGAGAAGCTGAAGGGGCCCTTGGTCGACATTATCCTGATCA
ACCAGGCCGCCCGTGAGCTGCAGGTAGGGAGAGTATAAGGGAGGAAGGGA
GGGAGGAAGGGATGGGTTTGAATAAAAGCGCTTCTTCCTAATTCTCGGTA
GTAGGTCAGGAGGCTCTTTTGATATTTACCCGCATTTCTCCCCTTTCCTC
CCCTTCCTCCTTCCCTTCCTCCCTCCCCCCCTCCCTCACCTCCTTACCTG
TCCAGCAAAAACCCATTTTCAAGGCTGTGCAAGATGGACTGACCGACGCC
CAGGTTCTTCTCCTCATTGCCATCATCCGCAGCACCCTCGACAGTGGAAG
GTGAGGTGGGACGGAGAGAGAGACATGGGCGGGGAGGAAGGAAGAGGAGG
AAGATAGAAAGTGTGGGAGAATCGGACGCCACGTCAAGTACTTACAAATG
CATCCAACAAACCTACCCCCTTCCCTCCCTCCCTCTTTTCATCTTATTCT
GCCTCTAGGCTAGAAGCATCCATGCCCGAAGTGTACCGGCGGTGGCGCAC
CTCTCTCTCCAAGATGGTACATCTGAGAGCAAGGAGAGGGAGAGGAGGAT
GGAGAAGAAGGGGGAAAAAAATAGACAACTTAAAGGGCAGATGGTCATCT
TCATGCACACATGCATCCCCCTGACTCGTCTTTCGTCTTTTCCTCCCACC
CGCTCTTTCTCCCTTTCTAGAATCTGCATCCTCCCTCCCTGACCCCTTGC
TACGGCGAGGCCGTGGAGGTGGCCCAGCGCCTGGCCCTCGACGGCTTCCT
TCGCCTGAGTAAGACCGAGCAGGCGTGGGCGCCTTTTGTTACGCTCCAGT
TGCAGGTAGGAAGGGAGCGGGGAACGGAGGAAGGGATACTTTAGGTAATG
AGAAAGGTGGGGAAAAAGACGAATAAAGACCGAGAGTCACTGGTTCCTAC
TTGTGCCTTGTCCTCACGCTCTCACCTTCTCACCCCCTCCTCCCCCTCCT
CCTCCTCCCCCCCTCCTCCTCCCATTCCTTCGAACTCTTTCTTGCCCCCT
CTCCCGTTCCTACCCGACCCTCCATCCTCCCTAAGTCGGCGGACGTGGCC
GAGGCCGTGCGCAAGGGTCGGCCCAAGGCAATGTACGAGCTGCTGCCCAG
CGAGCTCCGGGAGTGGAGCCACTGAGGATAGGGAGGAAGGAAAGAAGGGA
GGGATGATGGGAAGGACTGAACACAAAACAAAAGAAACCCAAAGTACGCT
CAAATCCAATGGCCAATGTCCCC
back to top

Coding sequence (CDS) from alignment at chr10:1211595..1217867-

>NO10G04060.1 ID=NO10G04060.1|Name=NO10G04060.1|organism=Nannochloropsis oceanica|type=CDS|length=3336bp|location=Sequence derived from alignment at chr10:1211595..1217867- (Nannochloropsis oceanica)
ATGAAAGGGGACGCTACTTCACCTCTGACGCGTCGTTTCCGAATAACGGG
GGTGCAAACAGTCTTCTGTACTACAGCAGCGAGCGGTGGTCCTAATTTCC
GACCCGCGTCCTCTTATCATGCCTCCTCCCCGTCCTTGCAGACCCGGCTG
GGAATGGGGGAGCCTCCGGTGGCCCCGACTGCCATTACCGCCGCCACCAC
CCTTTCTACTACCGCTGCTGCCTGCTCCTCGAGCCAAAGGACAGGCGCTT
CCACAGCCTCAACCTCGACGGCTGCCACTACTAGTACCTCTTATTGCGGG
AGTGCTCCGGGTTATACAGAGGGGAGCAGCAGTGAGGAGGAAGAGGAAGG
AGGAGGGGGAGGAAAGCTCGCAGGGGCGGAAGCAACCTATGCAGCTTCTA
GTACGCGTACCTGTACTGATGCAGCTGTCGCTACCAATATATCAACAGCG
GCGGCAACGGCAGCACCATCGATGCGCGGAAGAAGAGGTAGCAACACCAG
CAGCAGAAGGGGGAGCGGGAGAGATAGTCGCGGAAACTCCCCGTGTCGCT
CCGTCGCCTCCTCCTCCTCGTCCTACCTGCAGGTGGACTCGGAGGAAGAT
GAGGAGGAGGATATCGAAGAGCAACGGCAACAGCGGTTGCAGCTCCAGGA
ACGATTGCAGCAGCAACGGTTGGAAAAGGCCTTGCAGCGTCAGCAGCAAA
AGCAGCAGCAGCAGCAGCGTGAGGAAGAAGACAGGGGGGAGCAGCACCAC
GAAAAGGAGCCAATAGGGGAAGAGGAAGACGAAGGGATGGAGCTCAGCCA
AGACCAGAATGAATATGGACGGGGGAAGGGGGGAATAGAGGGGGAAGGAG
AGGAGGAGGAAGAGGAGGAAAGCGAGGGAGTCCCGGCAGAACTGGTGGGG
CCTATAGGGGAAGGCTTGGAGGGCGATCAGTACTTCGAGGCCGTGATTTG
GCAGGGCCAACTCTTCAGGATGGGGGACTGTGTTGAGGTGCTTTTGGATG
GCTCGGGCAAAGAGGAGGCGACTACGGGCTATGCCGAGATCTTGTGGCTG
TGGCGGTCGGCGGCGGTGGCGGTGCAGGAAGAGCCTTCCTCGGACGCCGG
CTTCTCCTCTTCCTCCGACGACGACGACTACGACAAGGAGGAAAGTGACG
CACCCTCGTCTTCTTCCCTTCCTCCTCCTCCCACCTCCTGCGCCTCCTCG
CAAGAGGGCGAGGCCATGATGGAAGTGAGGTGGTTTTGGTCGCCCCAAGA
GCTGTTGGTCAAGAAGGAGGACCGGACGCAGTGCCTGCTTCGAGAGCTGT
TCGAGAGCGACCGCGTGGATGAGATACCGGTGCAATCCATCAACGACCGT
ATTCGTGTCGTCGCGCCCCGTGCTCGAGGGCAGAGCAGGAGGGAGGCCTG
GGGGCAGGAAGCGGAGGAGGAAGAGGTGTTTGTCTGCCGCCGGCTATACC
ACTCCACGCGCGCAGCCTTTCTGCCTCTGGGCCCGAAAGCCATGCTGCCC
GAGGCACGTCGAACACGTGGCATGAATTACTCGGCCCGGCGAGATCAAAC
CCCCCTCTTGCGAGTGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTGTG
CCGGCAGCTGTAGTGCTGCGGTCGACAAGACGGGAGGGAAAAGGAACCGA
AATGAGGAGGAGGGGGAGGAGGATGAGGGGCAGGAGGGGGAGGAGAAGGG
AGCGGGCGAGGGTGAGGATGCGGGAGAGGATGGCAGGAATAAGACCGGGA
AGAAGAAAGAGAGGAAGGGAGGGAGGGAGGGGGGGAGGGAGGGACGACTC
GAGGAGGAGAGTGAGGAACTCGCTCTCCTTTCGCAGGCGGAGGCCCGGCT
GCATTTGTCGTCGTCCCCCTGGAGTACTGCCACTAAGGCGGCGTCCTTGC
CGTGCCGAGAGCGGGAGACGCAGGAGGTGATGGAGTTCCTCGAGGCCGCC
CTCTCCGATTTCTACCAAGCCCGTCAACCTTCCTCCACCTCTTCCTCTCT
TGCTTCCTCCCTCCCCCTTTCCTCCTCACCCGCCTCGTCAAGAGGGGGCT
TGTATATTGCGGGCTTCCCGGGAACGGGCAAGACTGCCACGGTACACCAC
GTGTTGGGGCGGCTGAGAAAAGAGAGGCGAGACTTGGGCTTCACGCACTG
CGAGATTAATGGCCTCACGCTCTCTAATTCGTCGCAGGCCTACCCTCTGC
TATGGGCCGCTCTGACTGACCAGCGTGAGGCGGGCATGCCTCCTGCCCGG
GCCCTGGCCAAGCTCTCGGACTTCTTCACGAGTTCTCGGACTGCTGCCTC
TGCCTCGTCCTCGGCCGCCTCCCGCCAACGCCGCGCCCGGCCGGTGGTGG
TGGTGCTCGACGAGATGGACTATTTGGTGGGCAAGAGCCTGCACACCATG
GAGGGGAAGGTCATTTACAATTTGCTCGAGTGGGGTGCAGGAGGGGACGG
AGGGCGGCGGGGGCTCATTCTGCTGGGCCTTTCCAACACCGTGGACCTGC
CCGAGCGAGTCATGCAGCCACGAGTGCAGTCCCGCCTATCCCTCCGACGC
GTCCGCTTTGAGCCTTACTCCCACCTGCAGGTGGCGAGTATCTTGAAAAC
TCGGTTGGGCGGGCTCGTGCCGCGCGTGATCGATGACCAGTGCATTCAGA
TGTGTAGTCGCAAAGTGGCCAACGTCTCGGGGGACCTGCGGAAGGCCTTC
CAGGTCTGTCGTCACGCCATAGACCTCAAGCGCCGGCTCCTCTCCGCTTC
CGCTGATGCTACTGCTGCTGCTGCTGCTGCTGAAACCTCCTCCTCTTCGC
CTAGCACCAACAAGGAAAATGTTGCTGCTGCTCCGAACCCTCACGCTCCG
GTACCTGTCCCTGCAGCTGCTGGAGAGGGAGGTGGGAAAGAGAAGGAGAA
GCTGAAGGGGCCCTTGGTCGACATTATCCTGATCAACCAGGCCGCCCGTG
AGCTGCAGCAAAAACCCATTTTCAAGGCTGTGCAAGATGGACTGACCGAC
GCCCAGGTTCTTCTCCTCATTGCCATCATCCGCAGCACCCTCGACAGTGG
AAGGCTAGAAGCATCCATGCCCGAAGTGTACCGGCGGTGGCGCACCTCTC
TCTCCAAGATGAATCTGCATCCTCCCTCCCTGACCCCTTGCTACGGCGAG
GCCGTGGAGGTGGCCCAGCGCCTGGCCCTCGACGGCTTCCTTCGCCTGAG
TAAGACCGAGCAGGCGTGGGCGCCTTTTGTTACGCTCCAGTTGCAGTCGG
CGGACGTGGCCGAGGCCGTGCGCAAGGGTCGGCCCAAGGCAATGTACGAG
CTGCTGCCCAGCGAGCTCCGGGAGTGGAGCCACTGA
back to top
Synonyms
Publications