NO10G03670, NO10G03670 (gene) Nannochloropsis oceanica

Overview
NameNO10G03670
Unique NameNO10G03670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5237
Alignment locationchr10:1058126..1063362 +

Link to JBrowse

Properties
Property NameValue
DescriptionAcid sphingomyelinase-like phosphodiesterase 3b
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1058126..1063362 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_apaH
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO10G03670 vs. NCBI_GenBank
Match: EWM25563.1 (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 583.2 bits (1502), Expect = 1.100e-162
Identity = 280/405 (69.14%), Postives = 326/405 (80.49%), Query Frame = 0
Query:   69 PTVTYTRGTLNISAPSASSFSPSSIISPTSRLWRLTAG-EQRGFHLLQSGAVLAVAALCLGVGVLIGQSQSQVSLNSSYDINPFSHQQLQDAQAEWPAQPLLGNAWTPQDVQSVFTAYHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMRRVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFYRLRDPAKNLRLLVLNSGLWSPRYDNADLPRSLPDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTP 473
            PT+T T   L       S FS +S +   S  WR   G  +R  HLL +  +L V A  LGVG  IGQS++ +S  S   +  F    L   +A+WP   LLGN W+P+DV+ +FTAYHFTDAHIEPLYDK  V KG CR PDCCKKG+N+CEAFTY+E ELPTLGCDPPVSLLEGVLEAM+AVDP+VSYVLFTGDMNAHHLC E+LVRTTQ EFMRRV+RALP++PFVYAIGNNDLWPN+KNSEHNFEALYQ+QLKHCPQCA+FQG +EE+ +NA  FR+ G+YR RD AK++R+LV+NSGLW+PRYDN+DLP +LPD HMDWVE EL+AAKEGGE+VV+ISHIPPGHVRHS DW+ER+LDRYI LCTR+ GTI AQ YGHHSKEYIRSFSPEVGVL SAGVTP
Sbjct:   58 PTITRTASNLR---TGNSFFSAASAL--PSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRA-ISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTP 456          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: EWM25564.1 (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 583.2 bits (1502), Expect = 1.100e-162
Identity = 280/405 (69.14%), Postives = 326/405 (80.49%), Query Frame = 0
Query:   69 PTVTYTRGTLNISAPSASSFSPSSIISPTSRLWRLTAG-EQRGFHLLQSGAVLAVAALCLGVGVLIGQSQSQVSLNSSYDINPFSHQQLQDAQAEWPAQPLLGNAWTPQDVQSVFTAYHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMRRVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFYRLRDPAKNLRLLVLNSGLWSPRYDNADLPRSLPDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTP 473
            PT+T T   L       S FS +S +   S  WR   G  +R  HLL +  +L V A  LGVG  IGQS++ +S  S   +  F    L   +A+WP   LLGN W+P+DV+ +FTAYHFTDAHIEPLYDK  V KG CR PDCCKKG+N+CEAFTY+E ELPTLGCDPPVSLLEGVLEAM+AVDP+VSYVLFTGDMNAHHLC E+LVRTTQ EFMRRV+RALP++PFVYAIGNNDLWPN+KNSEHNFEALYQ+QLKHCPQCA+FQG +EE+ +NA  FR+ G+YR RD AK++R+LV+NSGLW+PRYDN+DLP +LPD HMDWVE EL+AAKEGGE+VV+ISHIPPGHVRHS DW+ER+LDRYI LCTR+ GTI AQ YGHHSKEYIRSFSPEVGVL SAGVTP
Sbjct:   58 PTITRTASNLR---TGNSFFSAASAL--PSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRA-ISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTP 456          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: PFX20861.1 (Sphingomyelinase phosphodiesterase D [Stylophora pistillata])

HSP 1 Score: 126.3 bits (316), Expect = 3.500e-25
Identity = 83/286 (29.02%), Postives = 135/286 (47.20%), Query Frame = 0
Query:  186 HFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVD--PDVSYVLFTGDMNAHHLCTE----DLVRTTQEEFMRRVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALL-----FRSAGFYRLRDPAKNLRLLVLNSGLWSPRYD-NADLPRSLPDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRH--SEDWSERYLDRYITL-CTRYVGTIAAQFYGHHSKEYIR 457
            HF+D H +P YDK   ++  CR     KK  N    +T    +   +GCD P+ L++  L+A++ V    DVS++L TGD++ H + T       V     +   R +   PN+P    +GNNDL P +    ++ +   +L     P       P + ++   L+     F   G+Y     +  + LLVLNS  WS   D NA++ +      + W+E +L+ A   G+KV+++ HIP G   +     W   Y  RY++L   +Y   + AQF+ H  K+  R
Sbjct:   84 HFSDIHYDPFYDKTIPQRSFCR-----KKISNSTAKYT---AQYGRIGCDSPIDLVQNSLDAIQNVSKMEDVSFILLTGDLSGHGMWTSYAGPHRVLDNIAQVSNRTHARFPNIPIFPVVGNNDL-PGHYVLPNSSDWYKELLTSWAPLILCSSCPNDVKKPTTLVVLEESFLEGGYYNASIASGKIVLLVLNSLYWSVAVDHNAEIFQKAV-QQLTWIEYQLEIAAMRGQKVILVGHIPAGIDTYDGKSYWFSNYTSRYVSLVAEKYSSFVTAQFFAHSHKDDFR 359          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: XP_022798179.1 (sphingomyelinase phosphodiesterase D-like [Stylophora pistillata])

HSP 1 Score: 126.3 bits (316), Expect = 3.500e-25
Identity = 83/286 (29.02%), Postives = 135/286 (47.20%), Query Frame = 0
Query:  186 HFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVD--PDVSYVLFTGDMNAHHLCTE----DLVRTTQEEFMRRVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALL-----FRSAGFYRLRDPAKNLRLLVLNSGLWSPRYD-NADLPRSLPDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRH--SEDWSERYLDRYITL-CTRYVGTIAAQFYGHHSKEYIR 457
            HF+D H +P YDK   ++  CR     KK  N    +T    +   +GCD P+ L++  L+A++ V    DVS++L TGD++ H + T       V     +   R +   PN+P    +GNNDL P +    ++ +   +L     P       P + ++   L+     F   G+Y     +  + LLVLNS  WS   D NA++ +      + W+E +L+ A   G+KV+++ HIP G   +     W   Y  RY++L   +Y   + AQF+ H  K+  R
Sbjct:   84 HFSDIHYDPFYDKTIPQRSFCR-----KKISNSTAKYT---AQYGRIGCDSPIDLVQNSLDAIQNVSKMEDVSFILLTGDLSGHGMWTSYAGPHRVLDNIAQVSNRTHARFPNIPIFPVVGNNDL-PGHYVLPNSSDWYKELLTSWAPLILCSSCPNDVKKPTTLVVLEESFLEGGYYNASIASGKIVLLVLNSLYWSVAVDHNAEIFQKAV-QQLTWIEYQLEIAAMRGQKVILVGHIPAGIDTYDGKSYWFSNYTSRYVSLVAEKYSSFVTAQFFAHSHKDDFR 359          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: XP_003471149.2 (acid sphingomyelinase-like phosphodiesterase 3b isoform X1 [Cavia porcellus])

HSP 1 Score: 117.5 bits (293), Expect = 1.600e-22
Identity = 81/305 (26.56%), Postives = 130/305 (42.62%), Query Frame = 0
Query:  185 YHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMRR----VNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFYR--LRDPAKNLRLLVLNSGLWSPRYDNADLPRSL--PDDHMDWVEAELQAAKEGGEKVVMISHIPPG---HVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTPSAEAPW 479
            +H +D H++P Y   Q     C +               YN        CD P +L+   + AMK ++P+  ++ +TGD +  H+  E L      E + R    +  A P+     A+GN+D  P N+   H+    +Q+     P             ++  LF+   FY   L DP+   R++VLN+ L+   Y N  L   L  P     W+++ L  A   GEKV +I H+PPG     R    + + +   Y+ +  ++   IA QF+GHH  +  R F  + G   SA       +PW
Sbjct:   24 WHISDLHLDPNYTVSQDPLRVCPSAG---------TQMVYNPGPWGDYLCDSPWALVNSSVYAMKEIEPNPDFIFWTGD-DTPHVPDEKLGEAAVLEIVERLTSLIREAFPDTKVYAAMGNHDFHPKNQFPVHSNNIYHQVAELWRPWL---------NNESVNLFKEGAFYSELLPDPSSPGRIVVLNTNLY---YSNNQLTADLADPSQQFQWLDSVLTNASHAGEKVYIIGHVPPGFFEKTRKKAWFRDGFNKEYLKMVQKHHHVIAGQFFGHHHTDSFRMFYDDAGAPISAMFLAPGVSPW 306          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: OCA44596.1 (hypothetical protein XENTR_v90004858mg [Xenopus tropicalis])

HSP 1 Score: 117.1 bits (292), Expect = 2.100e-22
Identity = 84/311 (27.01%), Postives = 137/311 (44.05%), Query Frame = 0
Query:  185 YHFTDAHIEPLYDKDQVRKGTCRN------PDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMR----RVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFY--RLRDPAKNLRLLVLNSGLWSPRYDNADLPRSL--PDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSED---WSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTPSAEAPW 479
            +H TD H++P Y      +  C +      PD  + G  L               CD P  L+   + AMK++ P+  ++L+TGD +  H+  E L      E +R     + +  P      A+GN+D  P ++   HN  ++Y        + + F  P  + E +   FR   +Y   L+D     R++VLN+ L+   YD+  L  ++  P D   W+E +L  A   GEKV ++ H+PPG+     D   + E +  RYI +  ++   I  QF+GHH  +  R F  + G   S+        PW
Sbjct:   24 WHLTDLHLDPNYSVTSDPRKVCPSAGDQLVPDAGQWGNYL---------------CDSPRILINSSINAMKSILPNPDFILWTGD-DTPHVPNEQLGEDAVLEIIRWLTNLIQQTFPTTKVYSALGNHDFHPKSQLPPHN-NSIYD-------RISEFWSPWLKNE-SLPSFRKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEDQLNNANLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRYIEIIQKHHRVIQGQFFGHHHTDSFRMFYSDSGTPVSSMFIAPGVTPW 306          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: XP_017947302.1 (PREDICTED: acid sphingomyelinase-like phosphodiesterase 3b [Xenopus tropicalis])

HSP 1 Score: 117.1 bits (292), Expect = 2.100e-22
Identity = 84/311 (27.01%), Postives = 137/311 (44.05%), Query Frame = 0
Query:  185 YHFTDAHIEPLYDKDQVRKGTCRN------PDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMR----RVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFY--RLRDPAKNLRLLVLNSGLWSPRYDNADLPRSL--PDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSED---WSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTPSAEAPW 479
            +H TD H++P Y      +  C +      PD  + G  L               CD P  L+   + AMK++ P+  ++L+TGD +  H+  E L      E +R     + +  P      A+GN+D  P ++   HN  ++Y        + + F  P  + E +   FR   +Y   L+D     R++VLN+ L+   YD+  L  ++  P D   W+E +L  A   GEKV ++ H+PPG+     D   + E +  RYI +  ++   I  QF+GHH  +  R F  + G   S+        PW
Sbjct:   32 WHLTDLHLDPNYSVTSDPRKVCPSAGDQLVPDAGQWGNYL---------------CDSPRILINSSINAMKSILPNPDFILWTGD-DTPHVPNEQLGEDAVLEIIRWLTNLIQQTFPTTKVYSALGNHDFHPKSQLPPHN-NSIYD-------RISEFWSPWLKNE-SLPSFRKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEDQLNNANLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRYIEIIQKHHRVIQGQFFGHHHTDSFRMFYSDSGTPVSSMFIAPGVTPW 314          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: XP_003986567.1 (acid sphingomyelinase-like phosphodiesterase 3a isoform X2 [Felis catus])

HSP 1 Score: 116.7 bits (291), Expect = 2.800e-22
Identity = 90/336 (26.79%), Postives = 144/336 (42.86%), Query Frame = 0
Query:  163 WPAQPLLGNAWTPQ-DVQSVFTAYHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAH---HLCTEDLVRTTQEEFMRRVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFYRLR-DPAKNLRLLVLNSGL-WSPRYDNADLPRSLPDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSED---WSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTPSAEAPWLSLEKKMRRIP 490
            W   P  G    P+    +V   +H TD H++P Y         C +     KG N      + ++      CD P  L+    + +K    + S++++TGD   H   H  + D V          +    PN+    A+GN+D WP ++        L  +  K     A    P  + E    L R  GFY  +  P  NLR++ LN+ L + P      L ++ P +  +W+E  L  +++  EKV +I+HIP G+V HS +     E Y ++ I +  RY   IA QFYGH  ++ I   S + G   ++     A  P  S+ +K+   P
Sbjct:   15 WRGSPAFGLPLAPESSAPAVGQFWHVTDLHLDPTYHITDDHTKVCAS----SKGANASNPGPFGDVL-----CDSPYYLILSAFDFIKNSGQEASFMIWTGDSPPHVPVHELSTDSVINVIANMTTTIQSVFPNLQVFPALGNHDYWPQDQ--------LPVVTSKVYNAVANLWEPWLDEEAIHTL-RKGGFYSQKVSPNLNLRIISLNTNLYYGPNI--MTLNKTDPANQFEWLEKTLNTSQQNKEKVYIIAHIPVGYVPHSRNITSMRELYNEKLIDIFRRYSNVIAGQFYGHTHRDSIMVLSDKKGRPVNSLFVAPAVTPVKSVAEKLTNNP 330          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: OCT92068.1 (hypothetical protein XELAEV_18015125mg [Xenopus laevis])

HSP 1 Score: 116.3 bits (290), Expect = 3.700e-22
Identity = 76/305 (24.92%), Postives = 133/305 (43.61%), Query Frame = 0
Query:  185 YHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMR----RVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFY--RLRDPAKNLRLLVLNSGLWSPRYDNADLPRSL--PDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSED---WSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTPSAEAPW 479
            +H TD H++P Y      +  C +           +    +  +     CD P  L+   + AMK++ P   ++L+TGD +  H+  E L      E ++     + +  P      A+GN+D  P ++   HN    Y++     P           + ++ + F+   +Y   L+D     R++VLN+ L+   YD+  L  ++  P D   W+E +L  A   GEKV ++ H+PPG+     D   + E +  R+I +  ++ G I  QF+GHH  +  + F  E G   S+        PW
Sbjct:   24 WHLTDLHLDPNYTVTSDPRKVCPSAG---------DQLVTDAGQWGNYLCDSPRVLINSSIYAMKSILPKPDFILWTGD-DTPHVPNEQLGEEAVLEIIKWLTNLIQQIFPTTKVYSALGNHDFHPKSQLPPHNNSIYYRISEFWSPWL---------KNESVISFQKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEEQLNNAYLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRFIEIIQKHHGVIQGQFFGHHHTDSFKMFYSESGTPISSMFIAPGVTPW 306          
BLAST of NO10G03670 vs. NCBI_GenBank
Match: XP_018104968.1 (PREDICTED: acid sphingomyelinase-like phosphodiesterase 3b [Xenopus laevis])

HSP 1 Score: 116.3 bits (290), Expect = 3.700e-22
Identity = 76/305 (24.92%), Postives = 133/305 (43.61%), Query Frame = 0
Query:  185 YHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMR----RVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFY--RLRDPAKNLRLLVLNSGLWSPRYDNADLPRSL--PDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSED---WSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTPSAEAPW 479
            +H TD H++P Y      +  C +           +    +  +     CD P  L+   + AMK++ P   ++L+TGD +  H+  E L      E ++     + +  P      A+GN+D  P ++   HN    Y++     P           + ++ + F+   +Y   L+D     R++VLN+ L+   YD+  L  ++  P D   W+E +L  A   GEKV ++ H+PPG+     D   + E +  R+I +  ++ G I  QF+GHH  +  + F  E G   S+        PW
Sbjct:   12 WHLTDLHLDPNYTVTSDPRKVCPSAG---------DQLVTDAGQWGNYLCDSPRVLINSSIYAMKSILPKPDFILWTGD-DTPHVPNEQLGEEAVLEIIKWLTNLIQQIFPTTKVYSALGNHDFHPKSQLPPHNNSIYYRISEFWSPWL---------KNESVISFQKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEEQLNNAYLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRFIEIIQKHHGVIQGQFFGHHHTDSFKMFYSESGTPISSMFIAPGVTPW 294          
The following BLAST results are available for this feature:
BLAST of NO10G03670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25563.11.100e-16269.14acid sphingomyelinase-like phosphodiesterase 3b [N... [more]
EWM25564.11.100e-16269.14acid sphingomyelinase-like phosphodiesterase 3b [N... [more]
PFX20861.13.500e-2529.02Sphingomyelinase phosphodiesterase D [Stylophora p... [more]
XP_022798179.13.500e-2529.02sphingomyelinase phosphodiesterase D-like [Styloph... [more]
XP_003471149.21.600e-2226.56acid sphingomyelinase-like phosphodiesterase 3b is... [more]
OCA44596.12.100e-2227.01hypothetical protein XENTR_v90004858mg [Xenopus tr... [more]
XP_017947302.12.100e-2227.01PREDICTED: acid sphingomyelinase-like phosphodiest... [more]
XP_003986567.12.800e-2226.79acid sphingomyelinase-like phosphodiesterase 3a is... [more]
OCT92068.13.700e-2224.92hypothetical protein XELAEV_18015125mg [Xenopus la... [more]
XP_018104968.13.700e-2224.92PREDICTED: acid sphingomyelinase-like phosphodiest... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001222NSK001222Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03670.1NO10G03670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G03670.2NO10G03670.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|415848gene_3844Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100359g3gene4945Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03670.1NO10G03670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G03670.2NO10G03670.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03670 ID=NO10G03670|Name=NO10G03670|organism=Nannochloropsis oceanica|type=gene|length=5237bp
CAAAATATTACCCGGTTCATTCCTGGCATTCGACATCACCACGACGCACA
CACACACACGCGCACACAAACACACGCCGACGCCAATACAGAGGTGCCCG
ACATCACATAAACACAAGCATGGGCTGGTTAATCGCACGAGTACATTAAA
GTGAACTTGTGCTCCTTCTTGGCTTGACTGCGCTGCTTTGTCGATCCAAG
CTCGCTCCAGCAAACTGGGTGACGCGGTTTTTCCTTTCAGTGGTCAAGTC
ACCGAAAGTGAGGAAGGGTCTACGACATCTAAGGGCAGGAATTTTGTCTC
AAGACACCCGTGGAGACTGCTGGTGACTTTGCAAACACTTTCATTAAGTC
TTCGGAAGGACCCGGAATCCCCACGACCATTCCCTCATTCACGCCACATC
ACACCGCACCAACACAGCCACCGACCATGGTGCGTCGCAGTGGTAGCAGC
AGCGCCTTTTCTGGGAATGAAAACGGGGATTCCCTACCGCTAACACGTGC
CGATGGTCACCGTGGAAGCTATCAATCTATTCCCACGACCACTACCCCTC
TCGCAGCTAACAACAGTGCCAGCAGCAGCAGCAGCAGCATTGGGCATCAG
CAGGAGCACCAGCACGACGACGACAATCTGCCTACGGTGACCTACACCCG
AGGTACCCTGAATATCAGCGCTCCCTCTGCCTCTTCTTTCTCCCCTTCAT
CGATCATTTCCCCCACCTCCCGGCTCTGGCGTCTGACCGCGGGAGAACAA
CGTGGCTTCCACCTGCTGCAAAGCGGTGCTGTGTTGGCAGTGGCTGCATT
ATGTCTCGGTGTGGGTGTGCTGATCGGCCAATCGCAATCCCAAGTATCGC
TGAACAGCAGCTATGATATCAACCCTTTCTCCCACCAGCAGTTGCAGGAT
GCTCAGGCCGAGTGGCCTGCACAGCCCTTGCTTGGGAATGCATGGACTCC
TCAAGATGTCCAGTCGGTGTTCACGGCCTATCACTTCACCGATGCGCATA
TTGAACCGCTTTATGgtgcgtttatatatgtatgaacgaggggggaaccg
ttgcttccagcgggaagtttcgcctggagttctttttgggtttcacaccc
ttccctttcatctttccccttccctctgtcacatgcatttaaacgtgcct
ccctccctccctcccaccctatttcccctcctccctcccttcctaccccg
tttagACAAGGACCAAGTCCGTAAGGGCACCTGCCGCAACCCCGACTGCT
GTAAGAAGGGCAAAAACCTCTGCGAGGCCTTCACCTACAACGAGCTGGAG
CTCCCTACCCTGGGCTGCGACCCTCCCGTCTCCCTCCTGGAGGGAGTGTT
GGAAGCCATGAAGGCTGTCGACCCGGACGTGTCCTACGTGCTCTTTACAG
GCGACATGAATGCCCACCGTAAGTCCCGCCCTCCCTCCCCCTTTCCTTCT
TCCCCAACCCCCTCGAAAACACAAGCCATCATCCTCTTCTTCTCTCTCCT
TCCCTCCTCCTCTCGCTATTATCATCCTCTCCTTCCTCCCCTCCCTCCAC
CCTTCCCTCTCAACTTCTTAGATCTGTGCACCGAAGACCTGGTCCGGACA
ACCCAAGAGGAATTCATGCGCCGCGTAAATCGGGCTCTGCCCAACGTCCC
ATTCGTTTACGCGATTGGCAACgtaaggccctccctccctccctcccgta
tttcccccctcagtgtatcgaggcaaccgagctctacccaacatcccctt
ttccttggagccttccctccctccctcccttccttcctccctccctccct
ctagcccccctcaattcctcacgcccatttgcatgcattatccatcaccc
ttacacgatcgctcgcttctctcaattcctccctccctccctctctccct
ccctcccctttccctcagAACGACCTCTGGCCGAACAACAAGAATTCAGA
GCATAATTTCGAGGCCCTTTATCAGCTTCAGCTTAAGCATTGTCCTCAGT
GTGCGCTCTTTCAAGgtaaaaaaagaagggaagaagggatggagagagag
agtgatggataagaggaaaggctatctgtggatccatttaattgaaatcc
accgccttttcttaccttcgcaccttccctcccgccctcccaacctccct
cccgcccttattcctttcccagGTCCCAAAGAAGAAAGGGAAAAGAATGC
CCTTCTCTTTCGTTCCGCGGGTTTTTATCGTCTCCGAGATCCAGCCAAGA
ACCTACGCCTGTTGGTTCTTAACAGCGGGCTATGGTCCCCGCGGTACGAC
AACGCCGACTTGCCCCGCTCTTTGCCGGACGATCACATGgtatgtgcgtg
atggttggtcggttgctgggtctctggtttattcgtttgtgcttgatttt
gcgttgtttgcttggattgtgcgtggtttttcgtggtttgctttcccttt
tctccttccttcttgccatttatttcgtgcgccccgagggtgtgcggggg
ctgctgcaagatgagtgtcaatacgggcctcgctcactcttttccaaagg
aagcgcacatggcatctggcattatcgaccttgccttgtatgtcgtcgtg
tctggacgagaaacacccgtttctttccctctgtcttttcgtttcaggca
tccggtacctttcgtatctttcctcgagctgtcgcaggctctcccttttt
ctccgtcttcttttcggcctttcactcctcttccttccgctaccgctgct
gctgctgccgctgcttcatactctttttggtcttaatgcccgcgcacctc
atcctttttcttcccttccctcctccctttctacctcctctctctccagG
ACTGGGTTGAAGCCGAGCTGCAGGCCGCGAAGGAGGGAGGGGAGAAGGTC
GTCATGATCTCCCACATCCCTCCCGGGCACGTCCGACATTCAGAGGATTG
GAGTGAGAGGTACCTCGACCGGTACATCACCCTCTGCACgtaaggaggga
gggaaggagggagtgatggagggagatagggcgggcgggcgggaggaggg
ttggggttggcctcgtggacatgccgttcgtatttcactttcataccgtt
acccaggctccttacaccttgccctgcctccctttctccctccccccctc
ccttcctcccttccttcctctctccccctcagTCGGTATGTAGGCACGAT
TGCGGCCCAATTCTACGGGCATCATAGCAAGGAGTACATCCGCTCCTTCT
CGCCCGAGGTGGGCGTGTTGTGCTCCGCAGGTGTCACCCCCTCGGCGGAG
GCTCCTTGGCTTTCCCTGGAGAAAAAGATGCGGCGAATCCCACGTTCCGC
CATTTGGTATTCACTGAGAAAGgtatagtggctgggctttggcgccggtg
ccctcccttcctccctcccattctgcctctctctttcacacatatccttc
ctacttcctggtggaggtgtttacgggagaggatatgtacattcctacca
acaaatataaacttgtatgtgcgttttacaagaggcggtatcaacgtcgg
gttgcgcgtttccccatcgctcgctcctcatacgcatgtccctccttcct
tccctccccctccctccttccctccctccttcctccctccttccctccct
agGCCTTTACGACATGTGGTCATTTTACCTGGACCTGTCGAGCGGCGAGA
ACGACCACCTGGCTGTCCCAGGGAAGAGGTCCGGGGAGAAAGAGAAAGAC
AAGAAGAATTTGGCCGTCCTCCCGCGTGGTGAAGACACAGGGGAGGAAGG
GAAGGAGAGGGGGGTGTTTCTCCCCTCGTCGAGTCGAAAGGACAAGGACC
GGGCAGCGTTTGTGGCGTCGTTGGAAAGGCGTGCAGGGACAGCGGGAGGG
GTCTCGACCAAGTTTATCTCGGCCATTAAGGCCGCGAATAGCAGGGGATG
Ggtgcgttgctggagaatgagagagaaagagaggaagggagggagggaaa
gagggaggcagattgggacgaaatatcagaaaaacgcagaagcttttcga
aagatcgtttcatccacggttctcaaagagttcaattttttatgtacccg
tgacttaccatacccgtccctccgcccctccctcccctcttctctccctt
ccaccctccccttggaacagGACCTCATGTACTCCTTCCGGGAGACCTAC
AAGTGTCCTGACGTTTCGCCTGCCTCCATCCACCTGGCTGCCCAGCGCAT
CGTCCGTGATTCCCACTACACTTCTCGGTATGAGATGTATCTGGGAGGGT
TGCACTCACCCTACCGACTCATCACCTGCGACGTGCATACCCGGACGTGG
GACTCCCAGGAGGTGGAGGAGTGCTTTGACAGCCTGTGTGTGTATGACGT
GAGCCAGGAATGCTCCGACTTTGATGGGCGGAAGAAATACCGGCAGTTGT
TTTAGAGACCTGAGGCCTTTGTTCGAGACCTCGGTTTCCTCAGTGGGACG
ATAAGGAGAAGGGTGGTGATGAGAGGATCATAAAGACGAAGACAAGGATG
AAAGGGACGGGAGGAAAAGGAGGAAAGAAAACGAATAAGAGAGTCTGATG
GGTGAGAAATAAGAGGGGATGTCAAGTATGTATATGTAAAGAGAGAGACG
GAGGGGAAATGAGATATGGAAATGGATGGAAGGCGTGCACGATACATTTA
ACGAGGAACGAGGTAAGAAGCAGGGAAGCAGGGAAGATAGGAGGGAAATA
GGGAAGGAAGGAAGGAGGACTGTGCAGTCAAACAACGATTGAAAATGGGG
TAGAAGAGGAAGGTGGAAGAAGGGAAATCTGAAGACGCTTGAAACTCTGG
TGGGGGATCTGCTACATTCGCGAGTCGAAGACAATTGTAATGCGCGAAGA
AGTTAGAGGCAGCAACGGAGGGAAATGAGAGAGCAAATTAGAGATCTCTG
CGAGATTATCTTCGACGTTTTGGGATGAACTGGGTTTTGGTTGATTCGAA
GGACTTATAAGGAGGTTTTACATGGTCATGATCGCACGAACATCACTGGT
AGGTCCAAAGCATTCATTTATCAACGTGCTCTCTATTTTTGCTGGTACAC
GGTTATCTGACAAACAGACAGCCATTCATTCAAGGATCCCCAATGCCTCC
TGGGGACCCTGAACTATAGTGTAGACAAACAAAATACAAGCCATGCCAAG
CTTTAGTAAAAGAATGAAAACACACGTGCGTACGAAA
back to top

protein sequence of NO10G03670.1

>NO10G03670.1-protein ID=NO10G03670.1-protein|Name=NO10G03670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=676bp
MVRRSGSSSAFSGNENGDSLPLTRADGHRGSYQSIPTTTTPLAANNSASS
SSSSIGHQQEHQHDDDNLPTVTYTRGTLNISAPSASSFSPSSIISPTSRL
WRLTAGEQRGFHLLQSGAVLAVAALCLGVGVLIGQSQSQVSLNSSYDINP
FSHQQLQDAQAEWPAQPLLGNAWTPQDVQSVFTAYHFTDAHIEPLYDKDQ
VRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKA
VDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMRRVNRALPNVPFVYAIG
NNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAG
FYRLRDPAKNLRLLVLNSGLWSPRYDNADLPRSLPDDHMDWVEAELQAAK
EGGEKVVMISHIPPGHVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGHH
SKEYIRSFSPEVGVLCSAGVTPSAEAPWLSLEKKMRRIPRSAIWYSLRKA
FTTCGHFTWTCRAARTTTWLSQGRGPGRKRKTRRIWPSSRVVKTQGRKGR
RGGCFSPRRVERTRTGQRLWRRWKGVQGQREGSRPSLSRPLRPRIAGDGT
SCTPSGRPTSVLTFRLPPSTWLPSASSVIPTTLLGMRCIWEGCTHPTDSS
PATCIPGRGTPRRWRSALTACVCMT*
back to top

protein sequence of NO10G03670.2

>NO10G03670.2-protein ID=NO10G03670.2-protein|Name=NO10G03670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=727bp
MVRRSGSSSAFSGNENGDSLPLTRADGHRGSYQSIPTTTTPLAANNSASS
SSSSIGHQQEHQHDDDNLPTVTYTRGTLNISAPSASSFSPSSIISPTSRL
WRLTAGEQRGFHLLQSGAVLAVAALCLGVGVLIGQSQSQVSLNSSYDINP
FSHQQLQDAQAEWPAQPLLGNAWTPQDVQSVFTAYHFTDAHIEPLYDKDQ
VRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKA
VDPDVSYVLFTGDMNAHRKSRPPSPFPSSPTPSKTQAIILFFSLLPSSSR
YYHPLLPPLPPPFPLNFLDLCTEDLVRTTQEEFMRRVNRALPNVPFVYAI
GNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSA
GFYRLRDPAKNLRLLVLNSGLWSPRYDNADLPRSLPDDHMDWVEAELQAA
KEGGEKVVMISHIPPGHVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGH
HSKEYIRSFSPEVGVLCSAGVTPSAEAPWLSLEKKMRRIPRSAIWYSLRK
AFTTCGHFTWTCRAARTTTWLSQGRGPGRKRKTRRIWPSSRVVKTQGRKG
RRGGCFSPRRVERTRTGQRLWRRWKGVQGQREGSRPSLSRPLRPRIAGDG
TSCTPSGRPTSVLTFRLPPSTWLPSASSVIPTTLLGMRCIWEGCTHPTDS
SPATCIPGRGTPRRWRSALTACVCMT*
back to top
Synonyms
Publications