Naga_100359g3, gene4945 (gene) Nannochloropsis gaditana

Overview
NameNaga_100359g3
Unique Namegene4945
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:178849..182981 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100359g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:178849..182981 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL016ngnoL016Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03670NO10G03670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5124rna5124-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5123rna5123-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5124rna5124Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5123rna5123Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5124

>rna5124-protein ID=rna5124-protein|Name=rna5124|organism=Nannochloropsis gaditana|type=polypeptide|length=534bp
MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLE
MQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLY
ASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTH
SLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGE
NVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNA
HHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFE
ALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVV
NSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGH
VRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLV
SAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGRPLIACLPCRGPRRED
REEMNRPRRGSSARTRTSGIPPPGGHCRGPRAER
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protein sequence of rna5123

>rna5123-protein ID=rna5123-protein|Name=rna5123|organism=Nannochloropsis gaditana|type=polypeptide|length=684bp
MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLE
MQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLY
ASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTH
SLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGE
NVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNA
HHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFE
ALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVV
NSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGH
VRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLV
SAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGFYDMWSFYLDLSSGER
ERFLGEKRPRTSKTSPATPGEKAREESVGGGFLFPSSTRKEKDREAFVSA
LESAAAATPVTAMGRGDKRGVSAKFLEAVKAANSKGWDLMYSFRQTYKCP
DVSPASIHLAADRILRDSHYTTRYEMYLGGLHSPHRLITCDVHTRTWDSE
EVETCFDRLCLYDVSQECAALEPKKKKKHHHQMV
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Synonyms
Publications