NO10G03250, NO10G03250 (gene) Nannochloropsis oceanica

Overview
NameNO10G03250
Unique NameNO10G03250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1470
Alignment locationchr10:913058..914527 +

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Properties
Property NameValue
DescriptionDnase domain containing 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:913058..914527 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO:0016788hydrolase activity, acting on ester bonds
Vocabulary: INTERPRO
TermDefinition
IPR032466Metal_Hydrolase
IPR001130TatD_family
Homology
BLAST of NO10G03250 vs. NCBI_GenBank
Match: XP_005854568.1 (dnase domain containing 3 [Nannochloropsis gaditana CCMP526] >EKU21792.1 dnase domain containing 3 [Nannochloropsis gaditana CCMP526] >EWM25551.1 dnase domain containing 3 [Nannochloropsis gaditana])

HSP 1 Score: 353.6 bits (906), Expect = 6.000e-94
Identity = 177/284 (62.32%), Postives = 214/284 (75.35%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRG------ARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLFGL 279
            MFDVHAHLTA ELLP L+ LL EA+S GV DI+VVSEN++DAALVL LP  Q GVRLHK+LGLHPE+ACL++LS +L LIR +H++L C+GEIGLD+SPH+LG    EA K +Q+ECMRQQV LA ELD+ VNVHSR AGHHAL+LLRET +                  R        RAV HAWDGKA YA AAA+D++  IYFSVPPCA R P+M KWI RLPLE LLLETDCPALA  KG+VNVP+NL +S++V+G  KG+G++ + + TR+NAE LFGL
Sbjct:    1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELFGL 284          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: CBJ30246.1 (TatD DNase domain containing 3 [Ectocarpus siliculosus])

HSP 1 Score: 200.3 bits (508), Expect = 8.400e-48
Identity = 123/290 (42.41%), Postives = 161/290 (55.52%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGG-------VRLHKALGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGE---KHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLFGLGF 281
            MFD HAHLT   L   L+  L EA +AGV  I+ VSE+L DA  V+ L  +          +RLH ++G+HPE A L  +  +L LI  H   + C+GE+GLD+S H++GE   +  E  K +Q+E  R+Q   A EL +AVNVHSRSAGHHA++LL+E   T                    RAV HA+DGK  YA  AA   +   +FSVPP   R P     +  LPLE L+LETD PAL P KG  NVP NL +S + +   KG+  + + + T  NA RLF   F
Sbjct:    1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGIT--------------------RAVLHAFDGKPKYAVQAA---KAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFPRAF 267          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: XP_005712537.1 (unnamed protein product [Chondrus crispus] >CDF77498.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 172.6 bits (436), Expect = 1.900e-39
Identity = 111/285 (38.95%), Postives = 153/285 (53.68%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHPEYACL-------EALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEA-TKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAV-FHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            M D HAHLT+P  +  L  +L  A + G+  I+ VSE L DA  VL L     G  LH ALGLHPE+           ALS + +L++T  +    IGE+GLDY+P VL      A  K +Q +     + ++ +L + ++VHSR+AGHHALA + E A                  +R   AV  HA+DG+A +AE A       +YFSVPP   R   + K + R+P ERLLLE+D PALAP +G+ N P NL  + E++   KG+ +  + Q    N ERLF
Sbjct:    1 MIDTHAHLTSPAFISDLPIVLTRARTTGISSIICVSETLSDAHAVLNLTAAHPGF-LHPALGLHPEHVTTLAPAQLSAALSGITSLLQT--TPAVAIGEVGLDYTPRVLSLAASAADAKRLQADAFAHFLSMSQQLALPLSVHSRAAGHHALAHVVEAA------------------RRAPVAVCMHAFDGRAVHAERALRSVPEGLYFSVPPSVVRDDQLRKLVRRVPTERLLLESDAPALAPSRGERNEPANLVRAAEIIAEVKGVDVAAVRQTLAENTERLF 264          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: ORZ01687.1 (putative deoxyribonuclease tatdn3 [Syncephalastrum racemosum])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 112/298 (37.58%), Postives = 152/298 (51.01%), Query Frame = 0
Query:    3 DVHAHLTAPELLPH-------LESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHPEYA--------CLEALSAMLTLIRTHHSELT--CIGEIGLDYSPHVL-----GEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLFGL 279
            DVHAH+T              LE++L  A  AGV  I+ V+E+ +D   +L L     G  L  A+GLHP  A         L+  +    L++    E T  C+GEIGLD+S H++      E   +  +  Q+   R+QV LA+E D+ VNVHSRSAGHHAL +L E  A                     R + HA+DGK  YA+ A    EH  YFSVPP   R P     +A LPL  LLLE+D PAL P KG  N P N+ +S + +   K + +E++++ T RNAE LF +
Sbjct:    2 DVHAHITTDNFPTRADPPRITLEAILEHAKEAGVRHIVSVTESERDVEPILGLARDTDGFIL-PAVGLHPVQAVKDGERSVTLDDWTRFEPLLQKAIQERTIVCVGEIGLDFSRHIITGNPCNEDPEDQLRDTQRHVFRRQVQLAIEADLPVNVHSRSAGHHALEILYELNA--------------------KRVIMHAFDGKLSYAKKA---VEHGFYFSVPPSTVRSPQKQNMVAALPLSHLLLESDAPALGPEKGVDNEPANIMISAQEIARIKQISVEQVIEETTRNAETLFNM 275          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: XP_014157808.1 (hypothetical protein SARC_03865 [Sphaeroforma arctica JP610] >KNC83906.1 hypothetical protein SARC_03865 [Sphaeroforma arctica JP610])

HSP 1 Score: 160.2 bits (404), Expect = 9.700e-36
Identity = 96/230 (41.74%), Postives = 126/230 (54.78%), Query Frame = 0
Query:   56 RLHKA-----LGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLFGLGF 281
            RLH +     +GLHP  A LE L  +L LIR +  +L  IGE GLD++P VLG    +  K IQ+     Q  L++ELD+ +NVHSR AGHHA++LL+E                        R V HA+DGK  YA  AA    +  +FS+PP A R P   K I++LPL  LL+ETD PAL P   D NVP N  ++ +V+   KG+  EE+   T  NA +LF L F
Sbjct:   15 RLHSSTVKACIGLHPTEANLEILPDVLALIRKNAHDLVGIGECGLDFTPKVLG-NDGDKVKQIQRHVFAAQAALSVELDLPLNVHSRCAGHHAISLLKEAGV--------------------KRCVLHAFDGKPKYARQAAESMGY--FFSIPPSAVRSPEKRKLISQLPLSSLLIETDSPALGPTSKDRNVPSNAVIACQVISEVKGISAEEVAHTTTENATKLFKLSF 221          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: KRT69153.1 (TATDN3, TatD DNase domain containing 3, TatD DNase family protein [candidate division NC10 bacterium CSP1-5])

HSP 1 Score: 159.8 bits (403), Expect = 1.300e-35
Identity = 107/283 (37.81%), Postives = 149/283 (52.65%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAV-FHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLFGLGFAT 283
            + D HAH++       LE++L  A  AGV  I+ VSENL DA  VL L   +    L    GL+P+   LEA  AM+  IR H   +  IGE+GLD+   V+ E +      +Q++ + + V L+ ELD+ +N+HSRSAG H +  L++                      GAR V  HA+DGK   A AA    E   YFS+PP   R     K + RLPL+RL+LETD P L P     N P+N+ VS + +  AKG+ +EE+ + T  NA RLF   F++
Sbjct:    3 LIDAHAHMSDRAFGTDLETVLQAAAEAGVVGIVTVSENLDDARTVLEL--AERFPLLKPCAGLYPDVLDLEAAEAMVAFIRAHEDRVVGIGEVGLDH--WVVKETNGWE---VQEQALAKFVALSEELDLPLNIHSRSAGGHTVRFLQQ---------------------HGARKVLLHAFDGK---ASAALEGIEAGYYFSIPPSVVRSRQKQKLLERLPLDRLILETDSPVLGPDPAARNEPRNVLVSCQAIAAAKGVSIEEVARVTTENARRLFPKAFSS 254          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: POG73520.1 (putative deoxyribonuclease TATDN3 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 159.1 bits (401), Expect = 2.200e-35
Identity = 106/298 (35.57%), Postives = 153/298 (51.34%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPH--LESLLAEAHSAGVHDILVVSENLQDAALVLALP--TTQGGVR--LHKALGLHP-------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEK---------HPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            + DVHAH+  P   P+  +E +L+ A +A V  I+ VSE L+DA  +L L   T    +R  +    GLHP            E  +++L  I+   +EL  IGE+GLD++PH+L              E  K IQ++ + + + L+L+LD+ +NVHSRSAGHHAL  LR+  A                     + V HA+DG+  YA       E   +FS+PP   R P   K  A +PL  LLLETD PAL P KG  N P ++ +S   +   K + +EE++Q T +NA +LF
Sbjct:    5 LIDVHAHV-YPSSFPNTPIEEILSRAKTANVQSIVTVSETLEDAKSILGLKNGTLSDSLREMIEPCAGLHPVQPVGAMSLVSTEQANSILEFIQEKSTELVGIGEVGLDFTPHILKNAIDSNTNLNLSTEELKNIQRQVLARHIALSLQLDLPLNVHSRSAGHHALDCLRDYGA--------------------RKVVMHAFDGQLKYAR---KGIEMGFFFSIPPSIIRSPQKQKLAAEIPLTNLLLETDSPALGPTKGVDNEPNSIIISATEISRIKQIPIEEVIQQTTKNAFKLF 278          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: PKY51197.1 (putative deoxyribonuclease TATDN3 [Rhizophagus irregularis])

HSP 1 Score: 158.7 bits (400), Expect = 2.800e-35
Identity = 105/298 (35.23%), Postives = 153/298 (51.34%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPH--LESLLAEAHSAGVHDILVVSENLQDAALVLALP--TTQGGVR--LHKALGLHP-------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEK---------HPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            + DVHAH+  P   P+  +E +L+ A +A +  I+ VSE L+DA  +L L   T    +R  +    GLHP            E  +++L  I+   +EL  IGE+GLD++PH+L              E  K IQ++ + + + L+L+LD+ +NVHSRSAGHHAL  LR+  A                     + V HA+DG+  YA       E   +FS+PP   R P   K  A +PL  LLLETD PAL P KG  N P ++ +S   +   K + +EE++Q T +NA +LF
Sbjct:    5 LIDVHAHV-YPSSFPNTPIEEILSRAKTANIQSIVTVSETLEDAKSILGLKNGTLSDSLREMIEPCAGLHPVQPVGAMSLVSTEQANSILEFIQEKSTELVGIGEVGLDFTPHILKNAIDSNTNLNLSTEELKNIQRQVLARHIALSLQLDLPLNVHSRSAGHHALDCLRDYGA--------------------RKVVMHAFDGQLKYAR---KGIEMGFFFSIPPSIIRSPQKQKLAAEIPLTNLLLETDSPALGPTKGVDNEPNSIIISATEISRIKQIPIEEVIQQTTKNAFKLF 278          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: ORY77145.1 (cell-death-related nuclease family member-like protein [Neocallimastix californiae])

HSP 1 Score: 158.3 bits (399), Expect = 3.700e-35
Identity = 99/292 (33.90%), Postives = 148/292 (50.68%), Query Frame = 0
Query:    2 FDVHAHLTAPELLPH-LESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP----------------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            FD HAH+ +P      +E ++ +A    +  I+ VSE  +D   VL +      V     +GLHP                  + LE +  +L LI+ H  E+TCIGE+G+DYSP  L  K+ E  K+IQ++   +Q+ LA E ++ +NVHSRSAGH+ +  L E                    K     + HA+DGK  Y   A    +   YFS+PP  +R P   K +  +PL+ ++LETD PAL+P K  +N P N+ +S E +   KG+ +EE+ + T  NA +LF
Sbjct:    5 FDCHAHINSPSFSKEDIEIIVKKAQEKNIKGIISVSETYEDCLDVLNVSKKYSIVT--PGIGLHPIQPLVDENGERLDKGGRTSTLEEVYPILELIKEHKDEITCIGEVGMDYSPQFL--KNVEEEKVIQKQIFEKQIELANEFNIPLNVHSRSAGHYVIETLIE--------------------KNAKNVLLHAFDGKPGY---ALKGLQAGYYFSIPPSIRRSPQKQKLVKNIPLDHIILETDSPALSPEKNTINEPCNVIISCEEIAKIKGVSIEEVSKITTENALKLF 269          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: ORY04070.1 (deoxyribonuclease tatdn3 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 156.4 bits (394), Expect = 1.400e-34
Identity = 114/294 (38.78%), Postives = 149/294 (50.68%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLP--HLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP---------EYACLEALSAMLTLIR--THHSELTCIGEIGLDYSPHVL-GEKHP----EATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            MFD HAH+  P   P   +  +L EA  AGV  IL V E L D   + AL      ++     GLHP              E +  M+T IR      ++  IGEIGLD+SPHVL  E +P    E  K  Q+     Q+V+A EL +AVNVHSRSAGHHA++LL E                     +   AV HA+DGK   A +A    +   YFS+PP   R P   K +A +PL  LLLETD PAL P KG  NVP NL +S + +   K + ++E+++ T  NA +LF
Sbjct:    1 MFDCHAHI-YPSQFPGRAITDILQEAKLAGVKGILSVPEKLSDVEEIQALALLNPIIK--PCAGLHPVQVGAEGKVRSVLEEEVGPMVTKIRELNGRQKICAIGEIGLDFSPHVLASELNPRISAEELKEQQRRVFSAQLVVAKELSLAVNVHSRSAGHHAISLLEE--------------------HKIELAVLHAYDGK---ASSAKRGVDLGYYFSIPPSIIRSPQKQKLVAAVPLSNLLLETDSPALGPEKGVDNVPSNLIISAQEIARIKDISVDEVIRVTSENALKLF 268          
The following BLAST results are available for this feature:
BLAST of NO10G03250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854568.16.000e-9462.32dnase domain containing 3 [Nannochloropsis gaditan... [more]
CBJ30246.18.400e-4842.41TatD DNase domain containing 3 [Ectocarpus silicul... [more]
XP_005712537.11.900e-3938.95unnamed protein product [Chondrus crispus] >CDF774... [more]
ORZ01687.11.300e-3737.58putative deoxyribonuclease tatdn3 [Syncephalastrum... [more]
XP_014157808.19.700e-3641.74hypothetical protein SARC_03865 [Sphaeroforma arct... [more]
KRT69153.11.300e-3537.81TATDN3, TatD DNase domain containing 3, TatD DNase... [more]
POG73520.12.200e-3535.57putative deoxyribonuclease TATDN3 [Rhizophagus irr... [more]
PKY51197.12.800e-3535.23putative deoxyribonuclease TATDN3 [Rhizophagus irr... [more]
ORY77145.13.700e-3533.90cell-death-related nuclease family member-like pro... [more]
ORY04070.11.400e-3438.78deoxyribonuclease tatdn3 [Basidiobolus meristospor... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001201NSK001201Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03250.1NO10G03250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|540502gene_3870Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100130g3gene4960Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03250.1NO10G03250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03250 ID=NO10G03250|Name=NO10G03250|organism=Nannochloropsis oceanica|type=gene|length=1470bp
CGTTGGATTTCTCATGCATGAATGGGCTCTCAAGATCTCTCAGCCAACGG
CAGCCGACAGACACAGGAGGTTGAGCAGTGTCTTGATGGTGGCCATGAAC
ATGCACTACACGGTGGTCGAAGTTGCTTTACGCTTGCTCAATCGAATGCA
TCCGTGATAGTTCTGCTGACTGAAAAGCTCAAAGTTATGTCGATCGCTGC
TGCGGGAGTTCTTAGTCGCCGGCTCACCAACAGCGATGTATAGGAATGAT
CATTTCTGTCGTAGCTATTCTACAATCATTCCCATTTAGCACCAGAGGCA
AGCGGAAGAATGTTCGACGTCCACGCCCATTTGACAGCACCGGAACTGCT
GCCACATTTGGAGAGCTTATTAGCAGAGGCACACAGgtaagcacgcttgc
ctcccaccctacaccctctccactccaccattatcgctccaatataatgc
cccaaatggaaagtaaagtgtaacaggctttagagatgtctatgaaagag
tcagtcagtgattttgagcagataaaacacggatttgaaatttagcgcca
tccatgctgtgcgacccgcccgaattcgacactcacactctcgccaatgc
tctccccatccatcctaatagCGCCGGCGTCCACGACATCCTGGTCGTCT
CAGAAAACTTGCAAGATGCCGCCTTGGTCCTCGCTTTACCTACCACTCAA
GGTGGTGTACGTTTACACAAGGCCTTGGGTCTCCATCCTGAATACGCATG
CCTAGAGGCCTTGTCCGCTATGCTGACGCTCATCCGAACTCATCACTCTG
AGCTCACGTGCATTGGCGAGATTGGCTTGGACTATTCTCCGCACGTCCTG
GGAGAGAAACACCCCGAGGCTACAAAAATAATACAACAGGAATGCATGCG
ACAGCAAGTCGTACTTGCCCTTGAGCTCGATATGGCTGTTAATGTCCACT
CTCGCTCGGCGGGCCACCATGCCTTGGCCTTGCTCAGGGAAACTGCAGCA
ACAGCAATTGCAGCTGCGGCTGAAGAGGGACCAGAAGGGCACGAACGAAG
AAAAAGAGGTGCTAGAGCAGTTTTTCATGCGTGGGATGGAAAGGCTCATT
ATGCTGAAGCGGCAGCCTCGGACACCGAGCACGACATTTACTTCTCCGTG
CCTCCCTGTGCTCAACGTTGCCCCTTGATGTCCAAGTGGATAGCCCGTCT
ACCTCTTGAACGGCTGCTGCTGGAAACAGATTGTCCAGCACTGGCGCCTT
TTAAAGGGGACGTTAATGTGCCAAAAAATCTTGGAGTTTCGGTTGAGGTG
GTAGGGATCGCCAAAGGAATGGGAATGGAGGAAATAGTACAGGCGACCCG
GAGGAATGCGGAGCGATTGTTTGGCTTAGGTTTTGCGACAGGGATGGACA
GAGGGTACAAAAAGTATGAGACAACTGGATAAGAGGAGAAGTAAAGTAAA
CATCTATTGTATTCGTGCGA
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protein sequence of NO10G03250.1

>NO10G03250.1-protein ID=NO10G03250.1-protein|Name=NO10G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPT
TQGGVRLHKALGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPH
VLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRET
AATAIAAAAEEGPEGHERRKRGARAVFHAWDGKAHYAEAAASDTEHDIYF
SVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSV
EVVGIAKGMGMEEIVQATRRNAERLFGLGFATGMDRGYKKYETTG*
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Synonyms
Publications