NO10G03200, NO10G03200 (gene) Nannochloropsis oceanica

Overview
NameNO10G03200
Unique NameNO10G03200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1110
Alignment locationchr10:901175..902284 +

Link to JBrowse

Properties
Property NameValue
DescriptionBis(5-adenosyl)-triphosphatase-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:901175..902284 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
IPR011146HIT-like
IPR001310Histidine_triad_HIT
Homology
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_005852795.1 (bis(5'-adenosyl)-triphosphatase [Nannochloropsis gaditana CCMP526] >EKU23040.1 bis(5'-adenosyl)-triphosphatase [Nannochloropsis gaditana CCMP526] >EWM25536.1 bis(5 -adenosyl)-triphosphatase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 258.1 bits (658), Expect = 3.000e-65
Identity = 126/168 (75.00%), Postives = 143/168 (85.12%), Query Frame = 0
Query:   89 SSSSSPPLPSPLLFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALDGVQLHKHFDLDIERRPRTEEDMAAEARWLRAFFPPERQPRA 257
            S+ + PPLPSPL FGPY+I+ DQVF+QS +S AIVNLKPLVPCH+L+LPYRVV+RF+DLRPEEVSDLY AVHEIGPVL+     +GLTISMQDGKAAGQTVPHVHVHVLPR EGDFTPND+VYE L+ V L KHFDLD+ERRPRT+ +MAAEA  LR  F P RQ RA
Sbjct:   78 SALAPPPLPSPLFFGPYEITPDQVFFQSHHSMAIVNLKPLVPCHVLILPYRVVERFSDLRPEEVSDLYRAVHEIGPVLQTYQKKQGLTISMQDGKAAGQTVPHVHVHVLPRLEGDFTPNDKVYEELEAVHLKKHFDLDVERRPRTQAEMAAEALELRKLF-PHRQGRA 244          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_008648578.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Zea mays] >ACF85685.1 unknown [Zea mays])

HSP 1 Score: 172.9 bits (437), Expect = 1.200e-39
Identity = 90/184 (48.91%), Postives = 122/184 (66.30%), Query Frame = 0
Query:   72 PGPILLRMYSSSSNGVRSSSSSPPLPSPLL-----FGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALD--GVQLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            P P LLR        + SSS S PLP P++     FGPYKI A +VF+ +  S A+VNL+PL+P H+LV P R V RFADL  +E+SDL++   E+G  LE+ +    LT ++QDG  AGQTV HVH+H++PRK+GDF  ND++Y+A+D    +L +  DLDIER+ R+ E+MA EA   RA F
Sbjct:   17 PLPGLLRRLPPHRRALSSSSGSIPLPPPVMEASYKFGPYKIDAREVFHATPLSYAMVNLRPLLPGHVLVCPKREVKRFADLSSDEISDLWVTAKEVGARLEQYHKASSLTFAIQDGPQAGQTVAHVHIHLIPRKKGDFEKNDEIYDAIDVKEKELKEKLDLDIERKDRSMEEMANEANEYRALF 200          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_004978497.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Setaria italica])

HSP 1 Score: 171.8 bits (434), Expect = 2.800e-39
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 0
Query:   89 SSSSSPPLPSP------LLFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALD--GVQLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            SSSSSPPL  P        FGPYKI A +VFY +  S A+VNL+PL+P H+LV P R V RFADL  +E SDL++   E+G  LE+ +    LT ++QDG  AGQTVPHVH+HV+PRK+GDF  ND++Y+A+D    +L +  DLDIER+ R+ E+MA EA   RA F
Sbjct:   35 SSSSSPPLQPPPGMEASYKFGPYKIDAREVFYATPLSYAMVNLRPLLPGHVLVCPKREVKRFADLSSDETSDLWVTAKEVGVRLEQYHKASSLTFAIQDGPEAGQTVPHVHIHVMPRKKGDFEKNDEIYDAIDVKEKELKEKLDLDIERKDRSMEEMAHEANEYRALF 202          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: AAS21001.1 (diadenosine tetraphosphate hydrolase [Hyacinthus orientalis])

HSP 1 Score: 167.9 bits (424), Expect = 4.000e-38
Identity = 84/173 (48.55%), Postives = 112/173 (64.74%), Query Frame = 0
Query:   78 RMYSSSSNGVRSSSSSPPLPSPLLFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALDGV--QLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            R Y   S    SSS +        FGPYKI   +VF+ ++ S A+VNL+PL+P H+LV P R V RF DL  +E SDL+L   E+G  LER +    LT ++QDG  AGQTVPHVH+H++PRK+GDF  ND++Y+A+D    +L +  DLDIER+ R+ E+MA EA   RA F
Sbjct:   26 RAYPLVSRSRSSSSKASMAADACTFGPYKIDKSEVFHSTSLSYAMVNLRPLLPGHVLVCPKREVKRFVDLTADETSDLWLTAKEVGGKLERYHEASSLTFAIQDGPQAGQTVPHVHIHIIPRKKGDFEKNDEIYDAIDAKERELKEKLDLDIERKDRSGEEMACEADGYRALF 198          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_011089552.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Sesamum indicum])

HSP 1 Score: 167.5 bits (423), Expect = 5.300e-38
Identity = 96/208 (46.15%), Postives = 121/208 (58.17%), Query Frame = 0
Query:   49 CFPGVTSFTVAPP-----LRPR-GHPHFHPGPILLRMYSSSSNGVRSSSSSPPLPSPLLFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALDG--VQLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            C   +T F    P     L PR   PH  PG   LR  SS S+ +    S         FGPYKISA +VFY +  S A+VNL+P+VP H+LV P R V RF DL  +E SDL+L   +IG  LE  +    LT ++QDG  AGQTV HVH+H+LPRK GDF  ND++YEA+D    +L +  DLD ER+ R+ E+MA EA   R  F
Sbjct:   13 CSLSLTPFLYLHPSTRRRLLPRHSPPHLSPGVTSLRASSSFSHDLHRMES-----ESYTFGPYKISAKEVFYSTQLSYALVNLRPVVPGHVLVCPRRDVKRFIDLTADETSDLWLTAQKIGHQLESYHNASSLTFTIQDGPQAGQTVSHVHIHILPRKSGDFENNDEIYEAIDSKEKELKQKLDLDKERKDRSMEEMAQEAAEYRKLF 215          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: PSC73570.1 (Bis(5 -adenosyl)-triphosphatase [Micractinium conductrix])

HSP 1 Score: 167.5 bits (423), Expect = 5.300e-38
Identity = 85/155 (54.84%), Postives = 105/155 (67.74%), Query Frame = 0
Query:  101 LFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALDGVQLH-------KHFDLDIERRPRTEEDMAAEARWLRAFF 249
            LFGP+KI+A++VF  S +  A VNLKP+VP H+LV P RVV RFA+L PEEVSDL+     +G  LE   G   LT+++QDG  AGQTVPHVHVH+LPRK GDF  ND+VY+A+D            +  DLD ER+ RT E+MAAEA  LR  F
Sbjct:   13 LFGPWKIAAEEVFVASPHCFAFVNLKPVVPGHVLVSPKRVVARFAELSPEEVSDLWCLAQRVGSALEPHFGASSLTLAIQDGPQAGQTVPHVHVHILPRKAGDFENNDEVYDAIDAASKDAQAAHSGEKLDLDKERKVRTREEMAAEAAELRTLF 167          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_014757456.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Brachypodium distachyon])

HSP 1 Score: 166.4 bits (420), Expect = 1.200e-37
Identity = 84/163 (51.53%), Postives = 110/163 (67.48%), Query Frame = 0
Query:   88 RSSSSSPPLPSPLLFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALD--GVQLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            R+ SSS P      FGPYKI A +VF+ +  S A+VNL+PL+P H+LV P R V RFADL   E SDL++   E+G  LE+ +    LT ++QDG  AGQTVPHVH+HV+PRK+GDF  ND++Y+A+D    +L +  DLDIER+ RT E+M  EA   RA F
Sbjct:   32 RAMSSSAPETEAYKFGPYKIDAREVFHATPLSYAMVNLRPLLPGHVLVCPKREVKRFADLSSNETSDLWVTAKEVGVQLEQYHKASSLTFAIQDGPQAGQTVPHVHIHVIPRKKGDFEKNDEIYDAIDVKEKELKEKLDLDIERKDRTMEEMGHEASEYRALF 194          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_010922832.1 (PREDICTED: bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Elaeis guineensis])

HSP 1 Score: 165.6 bits (418), Expect = 2.000e-37
Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 0
Query:  101 LFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALDGVQ--LHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            +FGPYKI   +VFY +  S A+VNL+PL+P H+LV P R V RF DL  EE SDL+L   E+G  LE  +G   LT ++QDG  AGQTVPHVH+H+LPRK GDF  ND++YEA+D  +  L +  DLD ER+ RT ++M+ EA   RA F
Sbjct:   62 MFGPYKIDRSEVFYSTPLSYAMVNLRPLLPGHVLVCPRREVKRFVDLSAEETSDLWLTAKEVGGRLECYHGASSLTFAIQDGPQAGQTVPHVHIHILPRKRGDFEQNDEIYEAIDEKEKDLKEKLDLDKERKDRTSQEMSCEADEYRALF 211          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_015698516.1 (PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Oryza brachyantha])

HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37
Identity = 80/149 (53.69%), Postives = 107/149 (71.81%), Query Frame = 0
Query:  102 FGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALD--GVQLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            FGPYKI A +VF+ +  S A+VNL+PL+P ++LV P R V RFADL  +E SDL++   E+G  LE+ +G   LT ++QDG  AGQTVPHVH+HV+PRK+GDF  ND++Y+A+D    +L +  DLDIER+ RT E+MA EA   RA F
Sbjct:   61 FGPYKIDAREVFHSTPLSYAMVNLRPLLPGNVLVCPKREVKRFADLSSDETSDLWVTAKEVGVQLEQYHGASSLTFAIQDGPQAGQTVPHVHIHVIPRKQGDFEKNDEIYDAIDVKERELKEKLDLDIERKDRTMEEMAHEANEYRALF 209          
BLAST of NO10G03200 vs. NCBI_GenBank
Match: XP_012702754.2 (uncharacterized protein LOC101759958 [Setaria italica])

HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37
Identity = 92/206 (44.66%), Postives = 122/206 (59.22%), Query Frame = 0
Query:   48 LCFPGVTSFTVAPP---LRPRGHPHFHPGPILLRMYSSSSNGVRSSSSSPPLPSPLLFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPEEVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRKEGDFTPNDQVYEALD--GVQLHKHFDLDIERRPRTEEDMAAEARWLRAFF 249
            LC   V   ++APP   LR   HP                 G+  SS          FGPYKI A +VF+ +  S A+VNL+PL+P H+LV P R V RFADL  +E SDL++   E+G  LE+ +    LT ++QDG  AGQTVPHVH+HV+PRK+GDF  ND++Y+A+D    +L +  DLDIER+ R+ E+MA EA   RA F
Sbjct:  181 LCSRAVLPLSLAPPPRFLRRLPHPRAVXXXXXXXXXXXXXXGMEVSSYK--------FGPYKIDAREVFHATPLSYAMVNLRPLLPGHVLVCPKREVKRFADLSSDETSDLWVTAKEVGVRLEKYHKASSLTFAIQDGPQAGQTVPHVHIHVIPRKKGDFEKNDEIYDAIDVKEKELKEKLDLDIERKDRSMEEMAHEANEYRALF 378          
The following BLAST results are available for this feature:
BLAST of NO10G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852795.13.000e-6575.00bis(5'-adenosyl)-triphosphatase [Nannochloropsis g... [more]
XP_008648578.11.200e-3948.91bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
XP_004978497.12.800e-3952.98bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
AAS21001.14.000e-3848.55diadenosine tetraphosphate hydrolase [Hyacinthus o... [more]
XP_011089552.15.300e-3846.15bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
PSC73570.15.300e-3854.84Bis(5 -adenosyl)-triphosphatase [Micractinium cond... [more]
XP_014757456.11.200e-3751.53bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
XP_010922832.12.000e-3753.33PREDICTED: bifunctional bis(5'-adenosyl)-triphosph... [more]
XP_015698516.12.600e-3753.69PREDICTED: bis(5'-adenosyl)-triphosphatase-like [O... [more]
XP_012702754.22.600e-3744.66uncharacterized protein LOC101759958 [Setaria ital... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001197NSK001197Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03200.1NO10G03200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585696gene_3877Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100232g8gene4965Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03200.1NO10G03200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03200 ID=NO10G03200|Name=NO10G03200|organism=Nannochloropsis oceanica|type=gene|length=1110bp
AAGATGTGTGCCAAGTGATTGCATGAGTGGTGGTATGTGCGGTGTATACA
TTGCCTGTCCGCAGGACGCGGCATCTACATCGCCAGGCTCGTCACAACAC
AATCAACAGCGATGATGCGAGACGGAAGGCTGAATGCTTCACTTCCGAAT
TATTACCACACCAATCATTGGACACATAACTTCGACAGGTGTGAGAGTAC
ATTTTCAAGCAAGACAATGCTCTCCGCCCTGTAAGAAGTCCTCTTTCCCG
CCCGTCCCCCTACATGCTTCCTAGCCTCAGCCTGACTGCACGTACCCTCC
GGGGTATTCTCTCCTCCACTTCTGTCTCCTTATCGACTGTTGTCCCTCGA
CGCCATCGATTTCGGGCAACTGCAGCTGCTGCAGCTGCGACAGCCACTGC
TTTGCTGTGCTTCCCAGGCGTCACCTCATTCACCGTTGCCCCTCCTCTAC
GTCCTCGGGGTCACCCTCACTTCCACCCGGGCCCCATCCTCCTCCGCATG
TATTCCTCCTCCTCCAACGGAGTTAGAAGCTCTTCATCTTCTCCGCCCTT
ACCATCTCCCCTCCTCTTCGGTCCATACAAAATTTCGGCAGACCAAGTAT
TTTATCAATCCGCATACAGCACGGCCATCGTCAATCTTAAACCTCTAGTC
CCCTGTCACATCCTCGTCTTGCCTTACCGTGTCGTAGACCGTTTCGCAGA
CCTGCGCCCCGAGGAAGTAAGCGATTTATACCTTGCTGTGCATGAGATTG
GACCGGTGTTGGAAAGGATCAACGGAGGGGAGGGTTTGACGATTTCGATG
CAGGACGGGAAGGCCGCGGGTCAGACGGTGCCTCACGTTCACGTCCACGT
GTTACCCAGAAAAGAAGGGGACTTCACTCCCAACGATCAAGTTTATGAGG
CGTTGGACGGAGTGCAGCTGCACAAGCATTTTGATTTGGATATAGAGAGG
AGGCCGAGGACGGAGGAGGACATGGCAGCGGAAGCGAGGTGGTTGAGGGC
GTTCTTCCCTCCGGAAAGGCAGCCACGGGCATAGAGTAGAAGGATAGAAC
GTGGTGAAGATTGACAATCACATAAAAGGGTGCAAATGAACAAGTGAATC
GTAATTGGCT
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protein sequence of NO10G03200.1

>NO10G03200.1-protein ID=NO10G03200.1-protein|Name=NO10G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MLPSLSLTARTLRGILSSTSVSLSTVVPRRHRFRATAAAAAATATALLCF
PGVTSFTVAPPLRPRGHPHFHPGPILLRMYSSSSNGVRSSSSSPPLPSPL
LFGPYKISADQVFYQSAYSTAIVNLKPLVPCHILVLPYRVVDRFADLRPE
EVSDLYLAVHEIGPVLERINGGEGLTISMQDGKAAGQTVPHVHVHVLPRK
EGDFTPNDQVYEALDGVQLHKHFDLDIERRPRTEEDMAAEARWLRAFFPP
ERQPRA*
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Synonyms
Publications