NO10G03120, NO10G03120 (gene) Nannochloropsis oceanica

Overview
NameNO10G03120
Unique NameNO10G03120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2839
Alignment locationchr10:873238..876076 -

Link to JBrowse

Properties
Property NameValue
Description40S ribosomal protein S3a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:873238..876076 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005840ribosome
GO:0005829cytosol
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0005198structural molecule activity
Vocabulary: INTERPRO
TermDefinition
IPR001593Ribosomal_S3Ae
Homology
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: EWM25506.1 (ribosomal protein s3a [Nannochloropsis gaditana])

HSP 1 Score: 490.7 bits (1262), Expect = 2.800e-135
Identity = 251/266 (94.36%), Postives = 260/266 (97.74%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKNQK+VSKGRKGGKKKI DPFLKKEWYDIKAPGYFKTR VGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGT+ILTNFHGMDLTREK+NSLIKKWQTLI+AHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAA+AQAAQVRAIRKKIVDIIKEKV  NDLKELVKLFIPEQIGREIE+A KGIFPLSVVY+RKVKVLKKPKFDLVKLMEIHEG TPVD+TGAG+DRPEEPALVPEVAGSGGRL
Sbjct:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: XP_008619762.1 (40S ribosomal protein S3a-2 [Saprolegnia diclina VS20] >EQC26860.1 40S ribosomal protein S3a-2 [Saprolegnia diclina VS20])

HSP 1 Score: 321.2 bits (822), Expect = 3.000e-84
Identity = 167/266 (62.78%), Postives = 209/266 (78.57%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK  DPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DE+Q +RK +L  EDV+GT+++T FHGMD TR+KI SLIKKWQTLIEA V+ KTTDGYT+RLF +AFTK+ P Q+ K  YAQ AQ+RAIRKK+  I+ E+  K DLK+L   FIPE IG+E+EKA +GIFPL   +VRK+KVLKKPKFD+ KLME+HE     ++ GA + R +E  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEDQSFRKIRLCCEDVQGTQVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFIPEIIGKEVEKACQGIFPLQNCFVRKMKVLKKPKFDVTKLMELHE--EGAEEKGAKVVR-DEDLLVQSMAGTGGRL 261
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: OQR94833.1 (40S ribosomal protein S3a [Achlya hypogyna])

HSP 1 Score: 320.5 bits (820), Expect = 5.000e-84
Identity = 167/266 (62.78%), Postives = 208/266 (78.20%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK  DPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DEEQ +RK +L  EDV+GT+++T FHGMD TR+KI SLIKKWQTLIEA V+ KTTDGYT+RLF +AFTK+ P Q+ K  YAQ AQ+RAIRKK+  I+ E+  K DLK+L   F+PE IG+E+EKA +GIFPL   +VRK+KVLKKPKFD+ KLME+HE      + GA + R +E  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEEQSFRKIRLCCEDVQGTQVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFVPEIIGKEVEKACQGIFPLQNCFVRKMKVLKKPKFDVTKLMELHE--EGAAEKGAKVVR-DEDQLVQSMAGAGGRL 261
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: XP_012200889.1 (40S ribosomal protein S3a-2 [Saprolegnia parasitica CBS 223.65] >KDO28449.1 40S ribosomal protein S3a-2 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 320.1 bits (819), Expect = 6.600e-84
Identity = 166/266 (62.41%), Postives = 209/266 (78.57%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK  DPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DE+Q +RK +L  EDV+GT+++T FHGMD TR+KI SLIKKWQTLIEA V+ KTTDGYT+RLF +AFTK+ P Q+ K  YAQ AQ+RAIRKK+  I+ E+  K DLK+L   FIPE IG+E+EKA +GIFPL   ++RK+KVLKKPKFD+ KLME+HE     ++ GA + R +E  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEDQSFRKIRLCCEDVQGTQVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFIPEIIGKEVEKACQGIFPLQNCFLRKMKVLKKPKFDVTKLMELHE--EGAEEKGAKVVR-DEDLLVQSMAGTGGRL 261
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: OQR95348.1 (40S ribosomal protein S3a [Thraustotheca clavata])

HSP 1 Score: 319.7 bits (818), Expect = 8.600e-84
Identity = 168/266 (63.16%), Postives = 207/266 (77.82%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK  DPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DEEQ +RK +L  EDV+GT ++T FHGMD TR+KI SLIKKWQTLIEA V+ KTTDGYT+RLF +AFTK+ P Q+ K  YAQ AQ+RAIRKK+  I+ E+  K DLK+L   FIPE IG+E+EKA +GIFPL   +VRK+KVLKKPKFD+ KLME+HE      + GA + R +E  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFSRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEEQSFRKIRLCCEDVQGTNVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFIPEIIGKEVEKACQGIFPLQNCFVRKMKVLKKPKFDVTKLMELHE--EGAAEKGAKVVR-DEDQLVESMAGAGGRL 261
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: XP_008872125.1 (hypothetical protein H310_08228 [Aphanomyces invadans] >ETV99569.1 hypothetical protein H310_08228 [Aphanomyces invadans])

HSP 1 Score: 318.9 bits (816), Expect = 1.500e-83
Identity = 168/266 (63.16%), Postives = 207/266 (77.82%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK  DPF +K+WYDI+ PG F+ R +GKTL+ RT GTKIASEGLKGRV EV LA+L   DE+Q +RK +L  EDV+GT+++TNFHGMD TR+KI SLIKKWQTLIEA V+ KTTDGYT+RLFA+AFTK+ P Q  K  YAQ AQ+R IRKK+  I+ E+  K++LK+L   F PE IG+EIEKA +GIFPL  V+VRK+KVLKKPKFD+ KLME+HE      + GA + R EE  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTAGTKIASEGLKGRVIEVCLADL-NKDEDQSFRKVRLAVEDVQGTQVITNFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFAIAFTKKRPNQQKKTCYAQTAQIRQIRKKMTTIMTEQASKSELKDLYLKFQPEIIGKEIEKACQGIFPLQNVFVRKMKVLKKPKFDVTKLMELHE--EGAQEKGAKVVR-EEDQLVKSLAGTGGRL 261
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: GAY05356.1 (40S ribosomal protein S3a [Pythium insidiosum])

HSP 1 Score: 318.9 bits (816), Expect = 1.500e-83
Identity = 163/266 (61.28%), Postives = 210/266 (78.95%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK+ DPF +K+WYD+KAP  F  R  GKTL+ RT GTKIASEGLKGRVFEV+L +L   DEEQ +RK +L AE+++GT+++T FHGMD TR+K+ SLI+KWQTLIEA V+ KTTDGY +RLF +AFTKR P Q+ K  YAQ++QVRAIRKK++ I+ ++  K D+K+L   F+PE IG+EIEKA +GI+PL  V++RK K+LKKPKFDLV+LME+HEG    ++ GA + R E+  LV   AGSGGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKVVDPFTRKDWYDLKAPAIFSERTFGKTLVNRTAGTKIASEGLKGRVFEVSLGDL-NKDEEQAFRKIRLCAEEIQGTQVVTGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKRRPNQLRKTTYAQSSQVRAIRKKMMQIMTDEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVFIRKCKILKKPKFDLVRLMELHEG--GAEEKGAKVGRDEQ--LVESQAGSGGRL 260
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: XP_008900376.1 (40S ribosomal protein S3a [Phytophthora parasitica INRA-310] >ETI53941.1 40S ribosomal protein S3a [Phytophthora parasitica P1569] >ETK93801.1 40S ribosomal protein S3a [Phytophthora parasitica] >ETL47195.1 40S ribosomal protein S3a [Phytophthora parasitica] >ETM00294.1 40S ribosomal protein S3a [Phytophthora parasitica] >ETM53497.1 40S ribosomal protein S3a [Phytophthora parasitica] >ETN14096.1 40S ribosomal protein S3a [Phytophthora parasitica INRA-310] >ETO82624.1 40S ribosomal protein S3a [Phytophthora parasitica P1976] >ETP23749.1 40S ribosomal protein S3a [Phytophthora parasitica CJ01A1] >ETP51736.1 40S ribosomal protein S3a [Phytophthora parasitica P10297] >KUF94454.1 40S ribosomal protein S1 [Phytophthora nicotianae])

HSP 1 Score: 318.5 bits (815), Expect = 1.900e-83
Identity = 163/266 (61.28%), Postives = 208/266 (78.20%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK+ DPF +K+WYD+KAP  F  R  GKTL+ RT GTKIASEGL+GRVFEV LA+L   DE+Q +RK +L AE+++G +I+T FHGMD TR+K+ SLI+KWQTLIEA V+ KTTDGY +RLF +AFTK+ P Q+ K  YA+ AQ+RAIRKK+  I+ E+  K D+K+L   F+PE IG+EIEKA +GI+PL  VY+RK K+LKKPKFDLV+LME+HEG    ++ GA + R EE  LV  +AGSGGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKVVDPFSRKDWYDVKAPAIFSERTCGKTLVNRTAGTKIASEGLRGRVFEVCLADL-NKDEDQAFRKIRLCAEEIQGNQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVYIRKCKILKKPKFDLVRLMELHEG--GAEEKGAKVAR-EEDQLVESMAGSGGRL 261
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: XP_022739096.1 (40S ribosomal protein S3a-like [Durio zibethinus])

HSP 1 Score: 318.5 bits (815), Expect = 1.900e-83
Identity = 162/265 (61.13%), Postives = 204/265 (76.98%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPAL---VPEVAGS 263
            MAVGKN KR+SKG+KGGKKK  DPF KK+WYDIKAP  F TR VGKTL+TRT GTKIASEGLK RVFE++LA+LQGGDE+  YRK +L AEDV+G  +LTNF GM+ T +K+ SL++KWQTLIEAHV+ KTTD YTLR+F + FTKR P QV +  YAQ++Q+R IR+K+ +I+  +    DLKELV+ FIPE IG+EIEKA   I+PL  V++RKVK+LK PKFDL KLME+H   +  +D G  ++RP + A+    PEV G+
Sbjct:    1 MAVGKN-KRISKGKKGGKKKAADPFAKKDWYDIKAPSVFTTRNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQGGDEDHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMSEIMTAQASSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--EDFGVKVERPADEAMAEATPEVVGA 262
[Close]
BLAST of NO10G03120 vs. NCBI_GenBank
Match: XP_002901276.1 (40S ribosomal protein S3a [Phytophthora infestans T30-4] >EEY59262.1 40S ribosomal protein S3a [Phytophthora infestans T30-4])

HSP 1 Score: 318.2 bits (814), Expect = 2.500e-83
Identity = 163/266 (61.28%), Postives = 209/266 (78.57%), Query Frame = 0 
Query:    1 MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILTNFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIEKAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRPEEPALVPEVAGSGGRL 267
            MAVGKN KR++KG+KGGKKK+ DPF +K+WYD+KAP  F  R  GKTL+ RT GTKIASEGL+GRVFEV LA+L   DE+Q +RK +L AE+++G++I+T FHGMD TR+K+ SLI+KWQTLIEA V+ KTTDGY +RLF +AFTK+ P Q+ K  YA+ AQ+RAIRKK+  I+ E+  K D+K+L   F+PE IG+EIEKA +GI+PL  VY+RK K+LKKPKFDLV+LME+HEG    ++ GA + R EE  LV  +AGSGGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKVVDPFSRKDWYDVKAPAIFSERNCGKTLVNRTAGTKIASEGLRGRVFEVCLADL-NKDEDQAFRKIRLCAEEIQGSQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVYIRKCKILKKPKFDLVRLMELHEG--GAEEKGAKVAR-EEDQLVESMAGSGGRL 261
The following BLAST results are available for this feature:
BLAST of NO10G03120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25506.12.800e-13594.36ribosomal protein s3a [Nannochloropsis gaditana][more]
XP_008619762.13.000e-8462.7840S ribosomal protein S3a-2 [Saprolegnia diclina V... [more]
OQR94833.15.000e-8462.7840S ribosomal protein S3a [Achlya hypogyna][more]
XP_012200889.16.600e-8462.4140S ribosomal protein S3a-2 [Saprolegnia parasitic... [more]
OQR95348.18.600e-8463.1640S ribosomal protein S3a [Thraustotheca clavata][more]
XP_008872125.11.500e-8363.16hypothetical protein H310_08228 [Aphanomyces invad... [more]
GAY05356.11.500e-8361.2840S ribosomal protein S3a [Pythium insidiosum][more]
XP_008900376.11.900e-8361.2840S ribosomal protein S3a [Phytophthora parasitica... [more]
XP_022739096.11.900e-8361.1340S ribosomal protein S3a-like [Durio zibethinus][more]
XP_002901276.12.500e-8361.2840S ribosomal protein S3a [Phytophthora infestans ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03120.1NO10G03120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585732gene_3888Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100032g3gene4974Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03120.1NO10G03120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03120 ID=NO10G03120|Name=NO10G03120|organism=Nannochloropsis oceanica|type=gene|length=2839bp
CACCACCCACCGCTCCTGCGTAGCCTTCCTTCTTCGTCGTCGTGGGACGT
GCCTCATACTGTCGGGGCTACACGATTGCGGTAGCATGGTTTGGAGGGCA
CACAGGGTTGCATGTGGTGGTTGCTTGTGGTGGGAGGCATGTTTCTGACT
GAATGGATGGTGTGCAAGGCAGGACGTTGCCTCCTCTCCCCTTGGCGACG
AATGGAGGGAGGTGGAAAGCCCTCTTATTGACTGCCACTTACACCTTTGA
CCCTCACAATCCATCAGTGAATTGTGCCTGGATTTAGGCTGGGCGTGTAG
TTGTTCAGAAGATCCTCCCACCTTTGGGAAGGGTGGCTTGAGTGTCATGC
ATCAGTCAGCCTCCCCCTCCACCGCACGCCTCGACGAAGAGGAGATGATG
AACACTCCACCACGCATTGATTTATCGACTCACATCTGTCCATCCCGCCC
ACCAACGACACCACACAGGCATCACTCTTCCCAGGCAACGTCCGTAGGAG
AACAGAAGCCATGGCTGTTGgtaagtggtcaaacgatgcgaggggtaggg
ttggataggggacgatggaaaggaagaaatagaggatggccttcgggtcg
tgggacatgttgctgcgatgagtggattgtacacccttggtatctatctg
gtagtcttggcaaggaaggtggcagagcgtggaagaggatgcgagcagtg
tacatatgcgtgtaggccttcagaagtcaccactttgttctcatcactcc
ctatccccctcctcgtcctccccctcttatctacaaaagGCAAGAACCAA
AAGCGGGTCTCCAAGGGCCGAAAAGGAGGCAAGAAGAAGATgtaagcagt
gctgctcccgctcttctcattccttttcccaatggatgttacgcaaacca
ctactctccgtcccttccctcacacatgatccccctccccctcctcttcc
ccctttcctctctagTACCGACCCTTTTCTGAAGAAGGAATGGTACGACA
TCAAGGCCCCCGGGTACTTTAAAACCCGCGCGGTGGGCAAGACGCTCATC
ACGCGCACCACCGGCACCAAGATTGCTTCCGAGGGACTCAAGGGCCGTGT
ATTCGAGGTGAATCTGGCTGAGCTGCAGGGCGGGGACGAGGAGCAGGGCT
ATCGCAAATTTCAGCTGGTGGCGGAGGATGTGAAGGGCACGGAGATTCTG
ACGAACTTTCACGGGATGGACTTGACAAGgtatgtcaaaggtgaaagggg
cgagggaggagtaggatgccacaccgaggttttgggagcgagagaaggct
ttagtttcagactatcttgttttctgcgcgggttacttcaggcgtcgttt
tgagaagtatgcgtatgtaggatagctgcctgatctgttcttaaaatgca
ctctctcacatgtttgtccttccccccctccatccctcattcccttcctc
ccactccctctttctcttctccattcacagGGAGAAGATCAACTCGCTCA
TCAAGAAGTGGCAGACGCTGATCGAAGCGCACGTGGAGGCCAAGACGACA
GACGGCTACACTTTGCGGTTGTTCGCTGTGGCCTTCACCAAGCGTGTCCC
CGGCCAGGTGTCCAAGGCAGCCTACGCGCAAGCGGCCCAGGTGCGCGCGA
TCAGGAAGAAGATCGTGGATATCATCAAGGAGAAGGTGGAGAAGAATGAC
CTGAAGGAACTGGTGAAGCTTTTgtgagtatttctcatctaaaatgatcg
cttttttatatcacaagggatggagggagggagagaggaggggtgtgtgg
ggtttttcaggacccaccatttccgagccaagggaaggtgtgggtgatgg
atgcttcccttttgtgtatatatgagctcatctgtgtattgctctagtca
tgtccatttcttttttttatccatttacttgttattatttattattaata
ttattattaatattataattatccagattttttttttttaatgacatgca
gttcactctgccacggagccccagcgagtctatcgccaggccacgggaaa
atcgaatcaaaactccctgctctgccatgtgactgcacagagagaacgtt
aattatgtccctcataggaacctctatgtaagaagtcctacggggcagca
tgcgcagtgagggctgacgaggaacaacatcttccattaagtttctataa
aaactccatttcaatgtctaaatttgtatatcttagtaattttttccgat
gtcaaaaatgccggcgcactcacccctccttccctccctccctccctccc
tccctccaacacagCATCCCCGAGCAAATCGGTCGCGAGATCGAGAAGGC
CGCCAAGGGCATCTTCCCCCTCTCGGTCGTGTATGTTCGTAAGGTGAAGG
TCCTTAAGAAGCCTAAATTCGATCTGGTGAAGCTCATGGAGATTCATGAG
GGACAGACACCCGTGGACGACACTGGCGCGGGCATTGACCGACCAGAGGA
ACCGGCCTTGGTGCCGGAAGTGGCTGGCTCGGGAGGGCGGCTGTAAGGCT
GTTGCTGGCGTAGGGGTGGAGGGAGGGGAGAGGGGGGTATTACTTTTGTA
ATTCTCCTTTTCTTCCGGCGGGAGTCCCTTCTTTCGGCCCGGGTGGTGCG
GGAGGGACGGGAGTGAAGGCTGTGACGTTGGCAGCCCGGGAGTCAGTTAG
GAACGTATTTCTTGTCTTCTTTTTGTTTCGTGTAGGCAGGTGGCAGAGCG
CGAGGCAGAAAAGACGACGAAGAAAGCAAGCGTGAGAACGCGAATATACC
AACAAGCAAAAAAGAAGGCAAAAAACACAAGCAAAATCA
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protein sequence of NO10G03120.1

>NO10G03120.1-protein ID=NO10G03120.1-protein|Name=NO10G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=267bp
MAVGKNQKRVSKGRKGGKKKITDPFLKKEWYDIKAPGYFKTRAVGKTLIT
RTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTEILT
NFHGMDLTREKINSLIKKWQTLIEAHVEAKTTDGYTLRLFAVAFTKRVPG
QVSKAAYAQAAQVRAIRKKIVDIIKEKVEKNDLKELVKLFIPEQIGREIE
KAAKGIFPLSVVYVRKVKVLKKPKFDLVKLMEIHEGQTPVDDTGAGIDRP
EEPALVPEVAGSGGRL*
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Synonyms
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