NO10G02590, NO10G02590 (gene) Nannochloropsis oceanica

Overview
NameNO10G02590
Unique NameNO10G02590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3224
Alignment locationchr10:708443..711666 -

Link to JBrowse

Properties
Property NameValue
DescriptionGeranylgeranyl reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:708443..711666 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Homology
BLAST of NO10G02590 vs. NCBI_GenBank
Match: EWM25472.1 (geranylgeranyl reductase [Nannochloropsis gaditana])

HSP 1 Score: 909.4 bits (2349), Expect = 4.500e-261
Identity = 457/472 (96.82%), Postives = 461/472 (97.67%), Query Frame = 0
Query:    1 MKSALFVSSLLMGAQAFTPTLPLNNAFVQRQAARAEPARAARGRGDMDMKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            MKSA FVSSLL+GAQAF PTLPLNNAFVQRQAARAEP RA R RGD+DMKYRVVVVGGGPSGSCAAEE+AKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLP EIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVN GATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPE IEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKM FYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAA SIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQ+VFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAP DKPVYNPVESLKRL
Sbjct:   42 MKSAFFVSSLLVGAQAFNPTLPLNNAFVQRQAARAEPIRAVRTRGDVDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: CEL99921.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 661.4 bits (1705), Expect = 2.100e-186
Identity = 326/447 (72.93%), Postives = 378/447 (84.56%), Query Frame = 0
Query:   28 VQRQAARAEPARAARGRGDMDMKYRVVVVGGGPSGSCAAEEMAKDKN-IETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELP-TTEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            + +Q   A     A  R   + KYRV V+GGGP+G+ AAE  A++ + +ET ++ERKMDN KPCGGAIPLCMV EF+LP  I+DRKVRKMKMISP+NREVD+G+TL P+EYIGMTRREVLD F+R RAV  GA AINGLVTKV+LP +++ GRY IH  NF+KG    GV E +E D+IIGADGANSRVAK+I AGEYNYAIAFQERIKI +E+M++YEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIK YQKAIRDRA +++  G+++KVEAHPIPEH RP+RVVGRVAL+GDAAGYVTKCSGEGIYFAAKSGRMAA  I  +M    RLPTE+EIKDTY+K YDR YGPTYTVLD+LQKVFY++NAAREAFVELCE +YVQKVTFDSYLYK+VQGN+P+ DI LLFKTIG+L+RGN  APPDK + NPVES KRL
Sbjct:   43 LHQQPPTAATQTHATTRMTPEAKYRVAVIGGGPAGASAAEIFAENGDMVETFMVERKMDNCKPCGGAIPLCMVEEFNLPENIVDRKVRKMKMISPSNREVDVGKTLLPHEYIGMTRREVLDKFMRDRAVEKGAVAINGLVTKVDLPESSDSGRYVIHLKNFDKGDKGTGVSETLEVDMIIGADGANSRVAKSIGAGEYNYAIAFQERIKIPDEQMKYYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKEYQKAIRDRAAERLRGGELLKVEAHPIPEHYRPKRVVGRVALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIMGVMKATGRLPTEQEIKDTYLKKYDRAYGPTYTVLDLLQKVFYTNNAAREAFVELCEDDYVQKVTFDSYLYKKVQGNDPLSDIGLLFKTIGSLIRGNVYAPPDKTISNPVESKKRL 489          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: AAP79193.1 (geranyl-geranyl reductase [Bigelowiella natans])

HSP 1 Score: 658.3 bits (1697), Expect = 1.800e-185
Identity = 320/436 (73.39%), Postives = 367/436 (84.17%), Query Frame = 0
Query:   39 RAARGRGDMD-MKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELPTTEGGRYKIHYSNF-EKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            R  +G    D  KYRV V+GGGPSGS AAE  AK+K I+T + ERKMDN KPCGGAIPLCMV EFDLP  +IDRKVRKMKMISP+NR VD+G+TLKPNEYIGM RREVLDGF+R R+V+ GA  INGLVTK+++P  +   Y IHY ++ +K  G AG P+ +E DV++GADGANSRVAKAIDAGEYNYAIAFQERI I EEKM++Y++LAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTV+NRP I  YQKAIR+RA D++  GKIIKVEAHPIPEHPRPRRV GR AL+GDAAGYVTKCSGEGIYFAAKSGRMAA +I +LM GGTRLPT++EI+DTYI DYD+ Y  TY VLD+LQKVFYSSNAAREAFVE+C+S+YVQKVTFDSYLYK VQG NPV+DIKLLF T+G++ R  A  P D+   NPVESLKRL
Sbjct:  105 RNLKGHAKADGSKYRVAVIGGGPSGSAAAEIFAKEKGIDTFIFERKMDNVKPCGGAIPLCMVDEFDLPESVIDRKVRKMKMISPSNRVVDVGRTLKPNEYIGMCRREVLDGFMRNRSVDLGAVPINGLVTKIDVPRGDSDPYVIHYQDYGDKTAGGAGTPKTMEFDVLVGADGANSRVAKAIDAGEYNYAIAFQERIAIDEEKMEYYKDLAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVVNRPDIPKYQKAIRERAKDRLEGGKIIKVEAHPIPEHPRPRRVQGRAALVGDAAGYVTKCSGEGIYFAAKSGRMAAQAIVQLMQGGTRLPTQQEIEDTYIADYDKKYQATYVVLDLLQKVFYSSNAAREAFVEMCDSDYVQKVTFDSYLYKTVQGGNPVDDIKLLFSTVGSIFRAQATTPKDREFSNPVESLKRL 540          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: CBJ30916.1 (geranylgeranyl reductase; geranylgeranyl diphosphate reductase; geranylgeranyl hydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 656.8 bits (1693), Expect = 5.300e-185
Identity = 327/452 (72.35%), Postives = 375/452 (82.96%), Query Frame = 0
Query:   22 PLNNAFVQRQAARAEPARAARGRGDMDMKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELPT-TEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            P    F  ++ A A  A  +     M MKY+V VVGGGPSGSCAAE +A   +++  L ERKMDNAKPCGGAIPLCM+ EFDLP  IIDRKVRKMKMISPTNREVDIGQTL  +EYIGM RREV+DGF+R RA+  GA AINGLV  +++P   + G+YKIH++ +EKG+   GV +  E D+IIG+DGANSRVAKA+DAG YNYAIAFQERIKISE+KM+FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRP IK YQ AIR RAG+KI  GKIIK+EAHPIPE+ RPRRVVGR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA ++ + +    +LPTE ++K TY+KDYD+LY PTY VLDILQKVFYS+NAAREAFVELCESEYVQKVTFDSYLYK+VQGNNPVED+KLLF T G+LMRG ALAPPD    NPVESLKRL
Sbjct:   26 PAARGFTGQRVAPA--AATSSSPSGMKMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGS-RKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISEKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVQGNNPVEDLKLLFGTFGSLMRGQALAPPDVTFSNPVESLKRL 474          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: XP_002294275.1 (hypothetical protein THAPSDRAFT_10234 [Thalassiosira pseudonana CCMP1335] >EED88630.1 hypothetical protein THAPSDRAFT_10234 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 653.7 bits (1685), Expect = 4.400e-184
Identity = 315/428 (73.60%), Postives = 372/428 (86.92%), Query Frame = 0
Query:   49 MKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELP----TTEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            MKY+V VVGGGPSG+CAAE  A++K I+TV+ ERKMDNAKPCGGAIPLCM+ EFD+P   +DRKVR+MK+ISP+N EVDIG TL+PNEYIGM RRE++D +LR RA++ GA  INGLVT +++P    TTE  +Y +HY  F+ G+ +AGVP+ +  D+IIGADGANSRVAKA+DAGEYN+AIAFQERIKI++E+M FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKA+RDRAGDKIA GKIIKVEAHPIPEH RP RV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA +I +LM GG RLPT+ EI+ TY+ DYD+LYGPTYTVLDILQKVFYS+N AREAFVELC S+YVQ+VTFDSYLYK+VQGNNP++DIKLL +TIG L++G ++A PD    NPVES+KRL
Sbjct:    1 MKYKVAVVGGGPSGACAAEIFAQEKGIDTVMFERKMDNAKPCGGAIPLCMIGEFDIPESTVDRKVRRMKLISPSNNEVDIGDTLQPNEYIGMCRREIMDKYLRDRAISYGAEPINGLVTAIDVPEDHKTTE-KQYTLHYQEFQAGS-SAGVPKSMNVDLIIGADGANSRVAKAMDAGEYNFAIAFQERIKITDEQMSFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAMRDRAGDKIAGGKIIKVEAHPIPEHYRPNRVQGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAIVKLMDGGKRLPTQNEIERTYLADYDKLYGPTYTVLDILQKVFYSNNGAREAFVELCNSKYVQQVTFDSYLYKKVQGNNPLDDIKLLGETIGCLIKGYSIAKPDAEFSNPVESMKRL 426          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: XP_009040240.1 (hypothetical protein AURANDRAFT_31415 [Aureococcus anophagefferens] >EGB05114.1 hypothetical protein AURANDRAFT_31415 [Aureococcus anophagefferens])

HSP 1 Score: 650.2 bits (1676), Expect = 4.900e-183
Identity = 325/426 (76.29%), Postives = 361/426 (84.74%), Query Frame = 0
Query:   49 MKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELP--TTEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            MKYRV VVGGGPSG+CAAE  A++ NIET ++ERK DNAKPCGGAIPLCMV EFDLP +IIDRKVRKMKMISP+NREVDIG+TLK +EYIGM RREV+DG+LR RAV  GA  IN LVTK++ P  +   GRY IHYS  + G  A    E ++ DVIIGADGANSRVAKAIDAGEYN+AIAFQERIKI +EKM FY+ELAEMYVGDDVSPDFY WVFPKYDHVGVGTGTVINRP IKMYQ AIR+RAGDKIA GKIIKVEAHPIPEH RPRRV  R  L+GDAAGYVTKCSGEGIYFAAKSGRMAA ++ +LM GGT LPTE+ I   YIK YD LYGPTYTVLDILQKVFY++NAAREAFV++C+SEYVQ VTF SYLYKR+   NPVEDIKLLF T+G+L+RG A+A PDKP  NPVESLKRL
Sbjct:    1 MKYRVAVVGGGPSGACAAEICAQEPNIETYIIERKFDNAKPCGGAIPLCMVDEFDLPADIIDRKVRKMKMISPSNREVDIGKTLKEDEYIGMCRREVMDGYLRDRAVEYGAIPINALVTKIDTPADSDSQGRYTIHYSRNDLGRKAP--EESLDVDVIIGADGANSRVAKAIDAGEYNFAIAFQERIKIDDEKMAFYDELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVINRPGIKMYQDAIRERAGDKIAGGKIIKVEAHPIPEHYRPRRVKNRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVKLMKGGTVLPTEEGITAEYIKPYDGLYGPTYTVLDILQKVFYTNNAAREAFVDMCQSEYVQDVTFQSYLYKRLVTPNPVEDIKLLFGTVGSLLRGRAIATPDKPFSNPVESLKRL 424          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: OUT43385.1 (geranylgeranyl reductase [Phycisphaera sp. TMED9])

HSP 1 Score: 648.3 bits (1671), Expect = 1.900e-182
Identity = 320/426 (75.12%), Postives = 360/426 (84.51%), Query Frame = 0
Query:   49 MKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELPT--TEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            MKYRV V+GGGPSG+CAAE  A++ NIET ++ERKMDNAKPCGGAIPLCMV EFDLP EIIDRKVRKMKMISP+N EVDIG TLK +EYIGM RREV+DG+LR RAV  GA  IN LVT ++ P    + GRY IHYS  + G  A    E ++ DVIIGADGANSRVAKAIDAGEYN+AIAFQERIKI +EKM FY+ELAEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRP IKMYQ AIR+RAGDKIA GK+IKVEAHPIPEH RPRR+  R  L+GDAAGYVTKCSGEGIYFAAKSGRMA  ++ + MAGGT+LPTE E++D YIK YD+LY PTYTVLDILQKVFY++NAAREAFV++C SEYVQ VTF SYLYKR+   NPVEDIKLLF T+G+L+RG A+A PDKP  NPVESLKRL
Sbjct:    1 MKYRVAVIGGGPSGACAAEICAQEPNIETYIIERKMDNAKPCGGAIPLCMVDEFDLPSEIIDRKVRKMKMISPSNVEVDIGSTLKDDEYIGMCRREVMDGYLRDRAVKLGAEPINALVTSIDCPAPGDDNGRYTIHYSRNDLGRKAP--DETLDVDVIIGADGANSRVAKAIDAGEYNFAIAFQERIKIDDEKMAFYDELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPGIKMYQDAIRERAGDKIAGGKVIKVEAHPIPEHYRPRRLKHRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAGEAVVKAMAGGTKLPTEAELEDLYIKPYDKLYFPTYTVLDILQKVFYTNNAAREAFVDMCRSEYVQDVTFQSYLYKRLVTPNPVEDIKLLFGTVGSLLRGRAIATPDKPFSNPVESLKRL 424          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: XP_002176632.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51095.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 642.5 bits (1656), Expect = 1.000e-180
Identity = 319/475 (67.16%), Postives = 388/475 (81.68%), Query Frame = 0
Query:    1 MKSALFVSSLLMGAQAFTPTLPLNNAFVQRQAARAEPARAARGRGDMDMKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELPT---TEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            MK  L +++ L    AFT      ++FV +  A    +++A     +DMKY+V VVGGGP+G+CAAE  A++K I+TVL ERK+DNAKPCGGAIPLCMV EFDLP  ++DRKVR+M +ISP   EVDIG+TLKP+EYIGMTRRE+LDG+LR RA++ GA  +NGLVT +++P        +Y I+Y  +E+G+ +AG P+ ++ D+I+GADGANSRVAKA+DAG+YN+AIAFQERIKI ++KM+FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKAIRDRAGDKIA GKIIKVEAHPIPEH RPRRV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA  I +LM  G+ LPT+ +I+ TY+K YD LYGPTYTVLD+LQKVFY +N AREAFVELC S+YVQ+VTFDSYLYKRVQGNNP++D+KLL +TIG L++G A A PD    NPVES KR+
Sbjct:    1 MKFTLALTT-LTSVSAFTA-----SSFVGQNLASVPVSKSA-----LDMKYKVAVVGGGPAGACAAEIFAQEKGIDTVLFERKLDNAKPCGGAIPLCMVGEFDLPESVVDRKVRRMNLISPKGVEVDIGETLKPDEYIGMTRREILDGYLRDRAIDYGAEIVNGLVTSIDIPADHKVSENQYTINYQAYEEGS-SAGTPKNMKVDLIVGADGANSRVAKAMDAGQYNFAIAFQERIKIPDDKMKFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRIALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVKLMKNGSVLPTQADIERTYLKKYDNLYGPTYTVLDLLQKVFYVNNGAREAFVELCNSKYVQQVTFDSYLYKRVQGNNPLDDLKLLGETIGCLIKGYADAKPDAEFSNPVESQKRI 463          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: OEU21653.1 (geranylgeranyl reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 642.1 bits (1655), Expect = 1.300e-180
Identity = 311/469 (66.31%), Postives = 383/469 (81.66%), Query Frame = 0
Query:    7 VSSLLMGAQAFTPTLPLNNAFVQRQAARAEPARAARGRGDMDMKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELPT---TEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            +++ +  A AFTP    +++F+ + +       A     +M+M+Y+V V+GGGPSG+CAAE  A++++I+TV+ ERKMDNAKPCGGAIPLCMV EFD+P  ++DRKVR+M ++SPT  EV IG TL+ +EYIGM RRE++D +LR RA+  GA  +NGLVT++++P    T   RY +HY  FE G  ++G P+ +E D+I+GADGANSRVAKA+DAGEYN+AIAFQERIKI ++KM  YEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKAIRDRAGDKIA GKIIKVEAHPIPEH RPRRV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA  I +LM GG RLPT++E++ TY+K YD+ YGPTY VLDILQKVFYS+N AREAFVELC+S+YVQ+VTFDSYLYKRVQGNNP++DIKLL +TIG L++G + A PD    NP+ES KRL
Sbjct:    8 LTTFVSAASAFTP----SSSFLGKTSV---AQNAVSSGSNMEMRYKVAVIGGGPSGACAAEIFAQERSIDTVMFERKMDNAKPCGGAIPLCMVGEFDIPETVVDRKVRRMNLVSPTGAEVSIGDTLQADEYIGMCRREIMDKYLRDRAIEYGAECVNGLVTRIDVPADHKTSDSRYTLHYQQFETGK-SSGTPKSMEVDLIVGADGANSRVAKAMDAGEYNFAIAFQERIKIPDDKMALYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAQEIIKLMDGGKRLPTQEEMEKTYLKKYDKAYGPTYAVLDILQKVFYSNNGAREAFVELCDSKYVQQVTFDSYLYKRVQGNNPLDDIKLLGETIGCLIKGYSNAKPDAVFSNPIESQKRL 468          
BLAST of NO10G02590 vs. NCBI_GenBank
Match: GAX20625.1 (geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [Fistulifera solaris])

HSP 1 Score: 637.5 bits (1643), Expect = 3.300e-179
Identity = 311/430 (72.33%), Postives = 360/430 (83.72%), Query Frame = 0
Query:   47 MDMKYRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNNGATAINGLVTKVELP----TTEGGRYKIHYSNFEKGTGAAGVPEMIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPPDKPVYNPVESLKRL 473
            +DMKY+V VVGGGPSG+CAAE  A++K I+TVL+ERK+DNAKPCGGAIPLCMV EFDLP  ++DRKVR+M ++SPT  EV IG TLKP+EYIGM RRE+LD +LR RA   GA  +NGLVT +++P    T E  RY IHY  + +G+  AGV + ++ DVI+GADGANSRVAKA+DAG YN+AIAFQERIKI +EKM+FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKAIRDRAGDKIA GKIIKVEAHPIPEH RPRRV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA  I  LM GG+RLP++ EI+ TYIK YD LYGPTY VLDILQ+VFYS+N AREAFVELCES+YVQ+VTFDSYLYK VQGNNP++D+KLL  TI +L+ G   A PD    NP ES KR+
Sbjct:   36 LDMKYKVAVVGGGPSGACAAEIFAQEKGIDTVLIERKLDNAKPCGGAIPLCMVGEFDLPESVVDRKVRQMNLVSPTGVEVSIGSTLKPDEYIGMCRREILDQYLRDRAQKYGAEIVNGLVTSIDVPADHKTNEDSRYTIHYQEYTEGS-KAGVAKTMDVDVIVGADGANSRVAKAMDAGLYNFAIAFQERIKIPDEKMKFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRIALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVALMKGGSRLPSQAEIESTYIKKYDNLYGPTYAVLDILQRVFYSNNGAREAFVELCESKYVQQVTFDSYLYKTVQGNNPLDDLKLLGTTIKSLIGGYKKAKPDAVFSNPEESKKRI 464          
The following BLAST results are available for this feature:
BLAST of NO10G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25472.14.500e-26196.82geranylgeranyl reductase [Nannochloropsis gaditana... [more]
CEL99921.12.100e-18672.93unnamed protein product [Vitrella brassicaformis C... [more]
AAP79193.11.800e-18573.39geranyl-geranyl reductase [Bigelowiella natans][more]
CBJ30916.15.300e-18572.35geranylgeranyl reductase; geranylgeranyl diphospha... [more]
XP_002294275.14.400e-18473.60hypothetical protein THAPSDRAFT_10234 [Thalassiosi... [more]
XP_009040240.14.900e-18376.29hypothetical protein AURANDRAFT_31415 [Aureococcus... [more]
OUT43385.11.900e-18275.12geranylgeranyl reductase [Phycisphaera sp. TMED9][more]
XP_002176632.11.000e-18067.16predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU21653.11.300e-18066.31geranylgeranyl reductase [Fragilariopsis cylindrus... [more]
GAX20625.13.300e-17972.33geranylgeranyl diphosphate/geranylgeranyl-bacterio... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001124NSK001124Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02590.1NO10G02590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585942gene_3952Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100207g6gene5029Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02590.1NO10G02590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02590 ID=NO10G02590|Name=NO10G02590|organism=Nannochloropsis oceanica|type=gene|length=3224bp
ATTTGTTCTGGGGGGCTGCTTTAGACCCCTCTATGACTGCGACCTGCTGA
GCGCATCCGTCGGACCTTTGTATGTAGGCGACTCAATGTCTCCTTCCGCA
TTGCCTGTGCTGATGCTCTAGTGGTCTACAATGCCAAGCCAAGCGCATTC
CCACTCTCACCCGTGGCCACACAGAGCTTGTATCCTTCATCTTGCAGTTG
TTGTTGCTGGGTGCAGCACTGAAAGCGAGCGGTCCTTTTCGTTTCGGCTG
CTGCTCTTATAGCGCACTGTCCCGCGTACTCCGCAGCGCTCTCTTTCGAA
TCTATCCACGCGCCTCTGTCCTTCTCGCGGCTCTGGTTGTGCCTGTGTCC
TTCCCACACATGCCCTGCTCACTGTTCTTACTCTCGCCCCTTTCCCACTG
CTACTTGAATAGGAAGCCACCATGAAGTCCGCCCTCTTTGTGTCCTCCCT
CCTTATGGGGGCCCAAGCGTTCACGCCCACGCTGCCCCTCAACAACGCCT
TTGTCCAACGCCAGGCTGCCCGCGCCGAGCCGGCCCGTGCCGCCCGTGGA
CGAGGAGgtgagtcagtgcgagggcggggacagtatagtgaaacgcaaag
atattcgcgtaagggaacaaaaagggcaagtcgagatgcaagggtcgtat
agaaacatgacatcatcaccatcttgttgcactcaccctaatttactgcc
cggtcgtgccttacttgtgacacagtagaaaacaactcaagccattctcc
ccaccacccaccgtcccacttcccctttttcctcactcgccttccgtatg
aacatgttagcacagagattctcaatcttaccactccctcacatcaccag
cgcccttatgttcctcactcaagttcggacaccacaaatgactcaccatt
tcactgcgatcccttccccgcagggcgggttcagacatgatcaacaacat
caatacgttccccttgcttcctagctcgctctgtaggagcagaatattca
caccaatcactcttttcaccaccttctcactctctttgtcctcccctccc
aaacagACATGGACATGAAGTACCGCGTGGTAGTGGTGGGCGGTGGCCCC
TCGGGCTCCTGCGCTGCCGAGGAGATGGCGAAGGACAAGAATATCGAGAC
CGTCCTCCTGGAGCGCAAGATGGACAACGCCAAGCCCTGCGGTGGTGCTA
TCCCCCTCTGCATGGTGTCCGAGTTTGACCTGCCCCCTGAGATCATCGAC
CGAAAGGTCCGCAAGATGAAGATGATCAGCCCGACCAACCGCGAGGTGGA
CATTGGGCAGACGCTGAAGCCCAATGAGTACATCGGTATGACCCGCCGCG
AAGTTCTGGACGGATTCCTGCGTCAACGTGCTGTGAACAACGGCGCGACG
GCCATCAACGGCCTGGTTACCAAGGTGGAGCTCCCCACCACCGAGGGCGG
GCGCTACAAGATTCACTACTCCAACTTCGAGAAGGGAACGGGCGCTGCTG
GTGTCCCGGAGATGATCGAGGCCGATGTGATCATTGGTGCTGATGGTGCC
AACTCCCGCGTGGCCAAGGCGATCGATGCCGGCGAGTACAACTACGCGAT
TGCCTTCCAGGAGCGCATCAAGATCTCAGAGGAGAAGATGCAGTTCTATG
AGGAACTGGCGGAGATGTATGTGGGCGATGACGTGTCCCCTGATTTCTAT
GCGTGGGTCTTCCCCAAGTATGACCATGTGGGTGTCGGGACAGGGACGGT
GATCAACCGACCTGCCATCAAGATGTACCAGAAGGCCATCCGCGACCGTG
CCGGTGACAAGATTGCCAACGGGAAGATCATCAAGGTGGAGGCTCACCCT
ATCCCCGAGCATCCCCGCCCCAGGCGTGTGGTGGGCCGTGTAGCTCTCAT
TGGCGATGCTGCTGGTTATGTGACCAAATGCTCGGGGGAGGGAATTTACT
TTGCCGCCAAGTCCGGCCGTATGGCCGCGGCGTCCATCAGGGAGTTGATG
GCAGGGGGGACAAGGCTACCGACGGAGAAGGAGATCAAGGACACGTACAT
TAAGGACTACGACCGACTTTATGGTCCTACGTACACGGTGCTGGACATCT
TGCAGAAGGTGTTTTACTCGTCTAACGCAGCCAGGGAGGCGTTCGTGGAG
TTGTGCGAGAGTGAGTACGTGCAGAAGGTGACGTTCGACTCCTACCTGTA
CAAGCGTGTACAGGGCAACAACCCGGTGGAGGACATCAAGCTGTTGTTCA
AGACCATTGGTGCCTTGATGCGTGGCAATGCCTTGGCTCCCCCTGACAAG
CCGGTCTACAACCCGGTGGAGAGCTTGAAACGGTTGTAAGCGGGTCGGAC
GAGGAAAGGAGGGAGGAAGGAAGGAATGAAGGACATGGTGGTACGTGGAG
GAAATAAATAAGGAACCTGCTTGATGCATTGTAATGTGTCTGGTCAACCC
TGTCAGGTATCCGAAGCGTCTGTAAAATGGTGCTTAGGGAATGATTAAAG
GAATGGAGTTTTGATAAGGTGGGGAGACGGGTTTGTTTTGTATGTGTGTT
GTGCTTGTTTTTTTGAGTGGAGGACATCAGGAACGACAGGGGATCAAGCG
AGCGTGCGTGCGTAGAGGTAGAAGAAGAGACCCACGTCGGCACCAGCAAT
TCAGGGATACAGACCCCAGAGCACCAATCGATTTGTCAACCCAATGGAGG
TCTCAGGAAGGAGAACAAATTCAATGCAAGCGATAAGAGAAAAAGCCATG
AAATGATACCACTCCGGCGATTAAAGATATGTGAAAGGGTGGTTCACAAG
GGACTATAGATAGATTACAAAGGGGAAATGAAAAGGAGGAGGAGAAAGAA
CAAGAGGAGAGGGAAGGGGTTAACGGTATGAAAGTGAAAACCAAGGGACG
GACGGCCTGAAGTAGCCGTGTCGCCCCCCCCCCCCCGCTGTCTAGATAGA
GAACACACAAGCCACATCATGAAGGAGGAGAGAAAACATAAAGAAAAATT
TAAGAGAACACAGAAGACGACAACACACAACAGCCAGGTCCGCCATTTCA
CCCCCAGAATTAGCTTCGTTCTCTTCCTTTTCCTCCTGTACCAACATTCA
AACATGTGTAATTTGCGACAAAGTTCAATAAGGAAAGTCAAGAGACAAGA
CACAGGAAGGGAACCAACACCCCTTCACTCACATAAATGAAAAGAAGAAA
ACGAGAGCGCTTCCCGAGCACCAC
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protein sequence of NO10G02590.1

>NO10G02590.1-protein ID=NO10G02590.1-protein|Name=NO10G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MKSALFVSSLLMGAQAFTPTLPLNNAFVQRQAARAEPARAARGRGDMDMK
YRVVVVGGGPSGSCAAEEMAKDKNIETVLLERKMDNAKPCGGAIPLCMVS
EFDLPPEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFL
RQRAVNNGATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPEMIE
ADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMQFYEELAEMY
VGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIAN
GKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGR
MAAASIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQKVFYS
SNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALM
RGNALAPPDKPVYNPVESLKRL*
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Synonyms
Publications