NO10G02420, NO10G02420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_004363895.2 (topoisomerase [Capsaspora owczarzaki ATCC 30864] >KJE92020.1 topoisomerase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 532.3 bits (1370), Expect = 1.900e-147 Identity = 261/396 (65.91%), Postives = 321/396 (81.06%), Query Frame = 0 Query: 191 SVGSSKVDKVLEEVRLLMLRSRRYDAPNPSLAELGITTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +V S VL+EV L ++ +L ELGI+ REV+ M V IE+ V+Q A IL G GFSY VP+R+++NQLY+ +L+RIVL V+ R F + VRKTAITTR+L LVHEVL+K IHITKRD+FYTDVKLF+ Q +SD VLDDVACM+GCTR+ LNVVASEKG+V+GRV F +DGD+IDCT+MGVGGKAIP ID+I +Q DA+F+LLVEK+AA+MRL+EDRFYN+YPCI+ITA+GQPDV+TRLFL +K L+IP+LGLVDSDPYGLKILSVY++GSKNMSYDSASLTTSDIKWLGVRPSDL+ YNIP +CRLDMTE D++ G+ LL+E+FI+ NP W+ ELELMLK K+KAEIQALS FGFQY+T+ YLP KL++GDWI Sbjct: 24 AVASKDAAVVLQEVNKLAKAQQQSVKHRATLEELGISDAREVAVMDDADVAQTIERIVIQAAQSILAGTGFSYDVPSRASSNQLYVPQLERIVLKSAVSNRPFSSTATVRKTAITTRVLSLVHEVLNKRIHITKRDLFYTDVKLFEKQNDSDAVLDDVACMIGCTRTSLNVVASEKGVVIGRVTFRDDGDFIDCTKMGVGGKAIPSLIDRITDLQGDAQFVLLVEKDAAFMRLSEDRFYNQYPCIIITARGQPDVSTRLFLNMVKTRLNIPILGLVDSDPYGLKILSVYLSGSKNMSYDSASLTTSDIKWLGVRPSDLETYNIPKECRLDMTESDIKYGQDLLKEDFIKNNPAWMAELELMLKTKEKAEIQALSNFGFQYLTQTYLPLKLQQGDWI 419
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_009602544.1 (PREDICTED: DNA topoisomerase 6 subunit A [Nicotiana tomentosiformis] >XP_016469099.1 PREDICTED: DNA topoisomerase 6 subunit A-like [Nicotiana tabacum]) HSP 1 Score: 532.3 bits (1370), Expect = 1.900e-147 Identity = 256/388 (65.98%), Postives = 323/388 (83.25%), Query Frame = 0 Query: 200 VLEEVRLLMLRSRRYDAPNPSLAELGI-TTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +L+ ++ L S + +LA++G+ TT REV+D+ + V + I +L +A IL GEGFS+ VP+RS+ NQLY+ ELDRI+L DK + R F N VRKT ITTRILQL+H++ +K IH+TKRD+FYTDVKLF+DQ +SD VLDDV+C+LGCTRS LNVVA+EKG+VVGR+ F +DGD IDCT+MG+GGKAIPP ID++ +QSDA FILLVEK+AAYMRLAEDRFYN++PCI++TAKGQPDVATRLFL+K+KMEL++PVL LVDSDPYGLKILSVY GSKNMSYDSA+LTT DIKWLG+RPSDLDKY IP QCRL MTE D++TG+ LL+E+F++KNP WV+EL LM+K K+KAEIQALS+FGFQY++E YLP KL++ DW+ Sbjct: 33 ILQTLKNLKASSAASSSKTLTLADVGLSTTCREVTDLPIDEVQYNIGSVMLNLARSILAGEGFSFNVPSRSSANQLYVPELDRIILKDKSSVRAFSNVSTVRKTTITTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDDGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELNLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPDQCRLPMTEQDIKTGKDLLEEDFVKKNPAWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQEQDWV 420
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_002294481.1 (topoisomerase [Thalassiosira pseudonana CCMP1335] >EED88315.1 topoisomerase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 530.0 bits (1364), Expect = 9.200e-147 Identity = 255/347 (73.49%), Postives = 306/347 (88.18%), Query Frame = 0 Query: 240 VLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 V+ IE +++A +L +GF ++P+RSA+NQ+Y+ ELDRIVL DK TR+FLN +E RK+AITTR+LQL+H VL K IHITKRD+FYTDVKLF DQ ESD VLDDVA M+GCTRS L+VVAS+KGLVVGR+ F EDGD+IDCT+MGVGGKAIPPYIDKI IQSDA+FILLVEKEAAYMR+AEDRFY +YPCIVITAKGQPDVATR+FL ++ EL IPVL LVDSDPYGLKILSVYM+GSKNMSYDSASLTT DIKWLG+RPSDL++Y++P QCRL+MTE+D++TG++LLQE FI KNP+W+KEL++M+K K+KAEIQALS+FGFQYITE YLPRKL++GDWI Sbjct: 6 VMEGIENVAVKIAKQVLAKQGFQLEIPSRSASNQVYVPELDRIVLGDKTGTRSFLNVKESRKSAITTRVLQLLHAVLLKRIHITKRDLFYTDVKLFVDQSESDGVLDDVATMIGCTRSNLHVVASDKGLVVGRISFFEDGDFIDCTKMGVGGKAIPPYIDKIENIQSDAEFILLVEKEAAYMRMAEDRFYQRYPCIVITAKGQPDVATRMFLSRITSELQIPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLNRYDLPDQCRLNMTENDIKTGKELLQEAFIMKNPKWMKELQIMVKTKQKAEIQALSSFGFQYITEVYLPRKLKEGDWI 352
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_002947507.1 (hypothetical protein VOLCADRAFT_103453 [Volvox carteri f. nagariensis] >EFJ51555.1 hypothetical protein VOLCADRAFT_103453 [Volvox carteri f. nagariensis]) HSP 1 Score: 529.6 bits (1363), Expect = 1.200e-146 Identity = 263/390 (67.44%), Postives = 314/390 (80.51%), Query Frame = 0 Query: 198 DKVLEEVRLLMLRSRRYDAPNPSLAELGIT-TVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 + VL++V+ L + + +L EL + REV D + VL EIE + VA I+ GEGFS+ +P+R+ NQ+Y+ ELDRIVL D V+ R F N RK AIT RIL LVHE++ K IH+TKRD+FYTDVKLF+DQ +SD VLDD+ACMLGCTRS LNVVASEKG+VVGR+ F EDGD+IDC RMGVGGKAIPP IDK++ I SDA FILLVEK+AA+MRLAEDRFYN YPCI++TAKGQPDVATRLFLK+LK L IPVL LVDSDPYGLKILSVYM GS NMSYDS++LTT DIKWLGVRPSDLD++NIP QCRL MTE D++TGR+LL+E+FI+ NPEWVKELELML K KAEIQALS+FGFQY+T+ YLP KL++GDW+ Sbjct: 23 EDVLKKVKALAAELKGNNEIEKTLGELKLPYNCREVVDKDTDEVLAEIETAIYAVAASIMDGEGFSFDIPSRAKGNQMYVPELDRIVLRDTVSKRPFANTATCRKAAITARILSLVHELVGKRIHVTKRDLFYTDVKLFEDQSQSDAVLDDLACMLGCTRSSLNVVASEKGVVVGRLSFREDGDFIDCQRMGVGGKAIPPNIDKVSDISSDAAFILLVEKDAAFMRLAEDRFYNTYPCIILTAKGQPDVATRLFLKRLKSTLKIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFNIPQQCRLPMTEEDIKTGRRLLEEDFIRANPEWVKELELMLATKVKAEIQALSSFGFQYLTQVYLPLKLQEGDWV 412
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_005846746.1 (hypothetical protein CHLNCDRAFT_31596 [Chlorella variabilis] >EFN54644.1 hypothetical protein CHLNCDRAFT_31596 [Chlorella variabilis]) HSP 1 Score: 528.5 bits (1360), Expect = 2.700e-146 Identity = 266/402 (66.17%), Postives = 319/402 (79.35%), Query Frame = 0 Query: 189 LTSVGSSK---VDKVLEEVRLLMLRSRRYDAPNPSLAELGIT-TVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 LT++ K VD++L +V+ L R + +LAEL + REV D VL EIE +L VA +LRGEGF+Y +P+RS NQLY+ ELDRIVL D + R F N RK ITTRILQLVHE+ +K IH+TKRD+FYTDVKLF+DQ SD +LDD+ACMLGCTRS L+VVASEKG+VVGR+ F EDGD IDC RMGVGGKAIPP IDK+ I SDA FILLVEK+AA+MRLAEDRFYN YPCI+ITAKGQPDVATRLFL+KLK L IPVL LVDSDPYGLKILSVYM GS NMSYDS++LTT DIKWLGVRPSDLD+++IP QCRL MT+ D++TG++LL+E+F++ NPEWVKELE+M+ K KAEIQALS+FGFQY+++ YLP KL++GDWI Sbjct: 15 LTALNKKKLKSVDEILGKVKWLAERVKGEPEVQKTLAELNLPHACREVVDKDAGAVLDEIETAILFVAASVLRGEGFTYTLPSRSKANQLYVPELDRIVLKDSQSHRAFANTSTCRKAVITTRILQLVHELCTKRIHVTKRDLFYTDVKLFEDQSNSDAILDDLACMLGCTRSSLHVVASEKGVVVGRLTFREDGDPIDCRRMGVGGKAIPPNIDKVDAITSDAMFILLVEKDAAFMRLAEDRFYNTYPCIIITAKGQPDVATRLFLRKLKQVLRIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFSIPQQCRLPMTDEDIKTGKKLLEEDFVKANPEWVKELEIMVTTKVKAEIQALSSFGFQYLSQQYLPLKLQEGDWI 416
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_011400762.1 (DNA topoisomerase 6 subunit A [Auxenochlorella protothecoides] >KFM27775.1 DNA topoisomerase 6 subunit A [Auxenochlorella protothecoides]) HSP 1 Score: 528.5 bits (1360), Expect = 2.700e-146 Identity = 257/368 (69.84%), Postives = 307/368 (83.42%), Query Frame = 0 Query: 220 SLAELGIT-TVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +L++LG+ REV D A VL EIEQ++LQ+A IL G GF Y +P RS NQLY+ ELDRIVL + R F + RK AITTRILQLVHE+ +K IH+TKRD+FYTDVKLF+DQ SD VLDDVAC+LGCTRS LNV+ASEKG+VVGR+ F EDGD IDC+RMGVGGKAIPP +DK+ IQSDAKFILLVEK+AA+MRLAEDRFYN YPCI+ITAKGQPDVATRLFL+KLK++L IPVL LVD+DPYGLKIL+VYM GS NMSYDS++LTT DIKWLGVRPSDLD+++IP QCRL MTE D++TGR+LL+E+F++ NP+WV+EL+LM K KAEIQALS+FGFQY+T YLP KL++GDWI Sbjct: 540 TLSDLGLPHACREVVDKAEVSVLSEIEQSILQIAVSILEGAGFQYAIPNRSKGNQLYVPELDRIVLKSSTSQRAFASTATCRKAAITTRILQLVHELCTKRIHVTKRDLFYTDVKLFEDQGHSDAVLDDVACLLGCTRSSLNVIASEKGVVVGRLTFREDGDVIDCSRMGVGGKAIPPNVDKVTAIQSDAKFILLVEKDAAFMRLAEDRFYNTYPCIIITAKGQPDVATRLFLRKLKLDLKIPVLALVDADPYGLKILAVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFSIPEQCRLPMTEEDIKTGRKLLEEDFVKANPDWVRELQLMQTSKVKAEIQALSSFGFQYLTHQYLPLKLQEGDWI 907
BLAST of NO10G02420 vs. NCBI_GenBank
Match: KMZ61007.1 (Type II DNA topoisomerase VI subunit A 2 [Zostera marina]) HSP 1 Score: 528.5 bits (1360), Expect = 2.700e-146 Identity = 251/368 (68.21%), Postives = 315/368 (85.60%), Query Frame = 0 Query: 220 SLAELGI-TTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +L +L + +T REVSD+ PE V IE T+L A IL GEGFS+ VP+RSATNQ+Y+ ELDRIVL DK + R+F + VRKTA+TT++L L+H++ K IH+TKRD+FYTDVKLF+DQ +SD VLDDV+CMLGCTRS LNVVASEKG+V+GR+ F +DGD IDCT+MGVGGKAIPP ID++A ++SDA FILLVEK+AA+MRLAEDRFYN++PC+++TAKGQPDVATRLF+KK+K EL +PVL LVDSDPYGLKILSVYM GSKNMSYDS++LTT DIKWLG+RPSDLDKY IP QCRL MTE D++TG+ LL+E+FI++N WV+ELE+M+K K+KAEIQALS+FGFQY++E YLP K+++ DW+ Sbjct: 64 TLTDLNLASTCREVSDVDPESVKESIECTILAAAKSILAGEGFSFSVPSRSATNQMYVPELDRIVLRDKSSLRSFSSLSTVRKTAVTTKVLSLIHQLCMKNIHVTKRDLFYTDVKLFQDQNQSDSVLDDVSCMLGCTRSSLNVVASEKGVVIGRIVFTDDGDRIDCTKMGVGGKAIPPNIDRVANMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTAKGQPDVATRLFMKKMKTELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFIKRNAGWVEELEIMVKTKQKAEIQALSSFGFQYLSEVYLPLKIQQQDWL 431
BLAST of NO10G02420 vs. NCBI_GenBank
Match: KOO53533.1 (DNA topoisomerase 6 subunit a-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 527.7 bits (1358), Expect = 4.600e-146 Identity = 259/391 (66.24%), Postives = 316/391 (80.82%), Query Frame = 0 Query: 197 VDKVLEEVRLLMLRSRRYDAPNPSLAELGITTV-REVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 VD VL+ V+ L A +LA++G++ V +EV M V IE+ + A I+RGEGFSY +P R+A+N LY+ ELDR+VL DK+ R F N RKTAITTR+LQLV E+ +GIH+TKRD+FYTDVKLFK Q ESD VLDD ACM+GCTRS LNVVASEKG+VVGR+ FE+DGD IDCT+MGVGGKAIPP ID++ I+ DA+FILL+EK+AA+MRLAEDRFYN YPC+++T KGQPDVATRLFL K++ L+IPVLGL D+DPYGLKILSVYM GSKNMSYD+ +LTT DIKWLGVRPSDLDKY IP QCRL+MTEHD++ G+QLL EEFI+ NPEW KELELM++ K KAEIQALS+FGFQY++++YLPRKL++GDWI Sbjct: 20 VDAVLKNVKKLRTTMGDQAAGKQTLADVGVSGVTKEVIAMDRHLVTRAIERIAMDAALTIMRGEGFSYTMPVRTASNMLYVPELDRLVLKDKMLERVFANASAARKTAITTRVLQLVLELCGRGIHVTKRDLFYTDVKLFKQQTESDDVLDDAACMIGCTRSSLNVVASEKGIVVGRIIFEDDGDTIDCTKMGVGGKAIPPSIDRVTSIRGDAQFILLIEKDAAFMRLAEDRFYNTYPCVIMTGKGQPDVATRLFLNKVRATLNIPVLGLFDADPYGLKILSVYMKGSKNMSYDAINLTTPDIKWLGVRPSDLDKYQIPKQCRLEMTEHDIKEGKQLLTEEFIKSNPEWHKELELMVRSKVKAEIQALSSFGFQYLSKEYLPRKLKEGDWI 410
BLAST of NO10G02420 vs. NCBI_GenBank
Match: PIA38748.1 (hypothetical protein AQUCO_02700152v1 [Aquilegia coerulea]) HSP 1 Score: 527.3 bits (1357), Expect = 6.000e-146 Identity = 253/360 (70.28%), Postives = 306/360 (85.00%), Query Frame = 0 Query: 227 TTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +T REV+D+ V EIEQ V ++ IL G GFS VPTR NQLY+ ELDRIVL DKV+TR + N VRKTAITTRILQLVH++ +KGIH+TKRD+FYTDVKLF+DQ +SDVVLDD++CMLGCTRS LNV+ASEKG+VVGR+ F ++GD IDCT+MG+GGKAIPP ID++ +QSDA FILLVEK+AAYMRLAEDRFYN++PCI+ITAKGQPDVATRLFL+K+K+EL +PVL LVDSDPYGLKILSVY GSKNMSYDS +LTT DIKWLGVRPSDLDKY IP QCRL MTE D++TG+ +L+E+F++KNP WV+EL LM++ K+KAEIQALS FGFQY++E YLP KL++ DW+ Sbjct: 70 STCREVTDLDLTSVQKEIEQIVFRITRSILSGSGFSLDVPTRGNANQLYVPELDRIVLKDKVSTRQYANVSTVRKTAITTRILQLVHQLCTKGIHVTKRDLFYTDVKLFQDQGQSDVVLDDISCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKLELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSGNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELSLMVRTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWL 429
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_002987030.1 (DNA topoisomerase 6 subunit A [Selaginella moellendorffii] >EFJ11873.1 hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]) HSP 1 Score: 526.6 bits (1355), Expect = 1.000e-145 Identity = 257/368 (69.84%), Postives = 315/368 (85.60%), Query Frame = 0 Query: 220 SLAELGI-TTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 SL++L + + REV+++ V EIE+ VL V IL+G+G +Y VP+R++ NQLY+ ELDRIVL DK + R F + V+KTAITTRIL+LVH++ SK IH+TKRD+FYTDVKLF +Q +SD VLDDV+CMLGCTR+ LNVVASEKG+VVGR+ F EDGD IDCT+MGVGGKAIPP IDKI ++SDA FILLVEK+AA+MRLAEDRFYN++PC+++TAKGQPDVATRLFL+K+KMEL +PVLGLVDSDPYGLKILSVYM+GSKNMSYDSASLTT DIKWLGVRPSDLDKY IP QCRL M+E D++TGR LL+E+FI+K+P W +ELELM+K K+KAEIQALS+FGFQY++E YLP KL++ DWI Sbjct: 48 SLSDLALEESCREVAELGSGEVKEEIEKLVLSVTKSILQGQGLAYTVPSRTSANQLYVEELDRIVLKDKTSIRPFASSSTVKKTAITTRILELVHQLCSKQIHVTKRDLFYTDVKLFTEQAQSDTVLDDVSCMLGCTRTSLNVVASEKGVVVGRLVFVEDGDRIDCTKMGVGGKAIPPNIDKIQDMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTAKGQPDVATRLFLRKMKMELRLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQCRLPMSELDVKTGRDLLEEDFIKKDPRWYQELELMVKNKEKAEIQALSSFGFQYLSEVYLPMKLQERDWI 415 The following BLAST results are available for this feature:
BLAST of NO10G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02420 ID=NO10G02420|Name=NO10G02420|organism=Nannochloropsis oceanica|type=gene|length=2149bpback to top protein sequence of NO10G02420.1 >NO10G02420.1-protein ID=NO10G02420.1-protein|Name=NO10G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=587bpback to top Synonyms
Publications
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