NO10G02190, NO10G02190 (gene) Nannochloropsis oceanica

Overview
NameNO10G02190
Unique NameNO10G02190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2583
Alignment locationchr10:599776..602358 +

Link to JBrowse

Properties
Property NameValue
DescriptionThreonine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:599776..602358 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
IPR029144Thr_synth_N
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO10G02190 vs. NCBI_GenBank
Match: EWM25414.1 (threonine synthase [Nannochloropsis gaditana])

HSP 1 Score: 840.1 bits (2169), Expect = 3.400e-240
Identity = 408/473 (86.26%), Postives = 440/473 (93.02%), Query Frame = 0
Query:    3 ARTLYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRIPTMD 476
            ART YCSTRG VK+ATFE+VVLGGLAPDRGLYVP+V+P  T  EL+ MR +TFP LA+AIVSRFVGE+DIPAKDLKDIIDRSYSTFR+ DVSPVKQ+GSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSG + FLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQC+A+EGTFDDCQNIVKAAFQD  FREEVRLGAVNSINWARVLAQITYY+WAYFRITDFDPSI++LSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFF TG YHKA+VTQTHSPSMDISISSNFERYL+ELA RDH  LK WMT FE TGEL+L G LL++AR+DFISGRGDEEQTLAT+RKWHE HGYLLCPHSAVGVHAADSL ML+ GRTVCLATAHPAKFPEAT++LGIE +LP ELAALAD+PMRSILL NDL  V+SY+K+RI +MD
Sbjct:    5 ARTRYCSTRGCVKNATFEDVVLGGLAPDRGLYVPEVLPTLTPVELQAMRCLTFPNLAYAIVSRFVGEEDIPAKDLKDIIDRSYSTFRSPDVSPVKQLGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGAEAFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCIAVEGTFDDCQNIVKAAFQDASFREEVRLGAVNSINWARVLAQITYYFWAYFRITDFDPSIEQLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFVTGEYHKAEVTQTHSPSMDISISSNFERYLYELADRDHTLLKKWMTNFEATGELTLSGQLLKRARQDFISGRGDEEQTLATIRKWHEDHGYLLCPHSAVGVHAADSLGMLRDGRTVCLATAHPAKFPEATERLGIESDLPAELAALADMPMRSILLHNDLVEVQSYVKSRIQSMD 477          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: CBN76262.1 (Threonine synthase [Ectocarpus siliculosus])

HSP 1 Score: 580.1 bits (1494), Expect = 6.300e-162
Identity = 288/471 (61.15%), Postives = 361/471 (76.65%), Query Frame = 0
Query:    7 YCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKR--SGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDK-------LSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIE-GELPKELAALADLPMRSILLKNDLEIVKSYM 468
            YCSTRGG K  +FE VVLGGLA DRGLYVP+V+P  +++EL   R + FPELAF I+S+++  ++IP+ DL D+  RS + FRT +V+PV +VG AW+LELFHGPTFAFKDVALQ LGNLFEYFL +R   G +  LTILGATSGDTGSAAIYGLRGKA+V CFI++P+GR S IQERQMTTVPD N+ CV++EG+FDDCQ+IVKAAF DK FREEV+LGAVNSINWARVLAQ+TYY+WA+FR+++   +  +       LS+SVPTGNFGDVLAGYYAKRMGLPV++L+VA N NDILHRFF TG Y +  V  T +PSMDI +SSNFERYLF L+G D   L GW+ +FE TG+L+LEG+LL++A+  F S R   E  LAT++++ +   YLLCPHS+VG  A   L M  +G+TV LATAHPAKFP+A  ++  +    P+ L  L DLP RS  + NDL+ V+ +M
Sbjct:   17 YCSTRGGAKGVSFENVVLGGLAEDRGLYVPEVLPSVSAQELAEWRKLAFPELAFKIMSKYISTEEIPSDDLLDLCKRSATNFRTEEVTPVVRVGKAWVLELFHGPTFAFKDVALQFLGNLFEYFLLRRRAKGEEAGLTILGATSGDTGSAAIYGLRGKAHVNCFIMFPEGRVSEIQERQMTTVPDANIHCVSVEGSFDDCQDIVKAAFADKPFREEVKLGAVNSINWARVLAQMTYYFWAHFRVSEALEAAGEPLEEGSGLSYSVPTGNFGDVLAGYYAKRMGLPVDRLVVAVNENDILHRFFSTGKYWREGVVPTLAPSMDICVSSNFERYLFHLSGDDGEVLAGWLKSFEATGQLTLEGELLDQAQSAFSSSRVVTEDNLATIKQFWDEKSYLLCPHSSVGAKAPLQLGM-PEGKTVVLATAHPAKFPDAVKKVVPDLPPAPEALQVLWDLPTRSTKMPNDLKKVEEFM 486          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: XP_002183750.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44932.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 570.1 bits (1468), Expect = 6.500e-159
Identity = 281/464 (60.56%), Postives = 347/464 (74.78%), Query Frame = 0
Query:    7 YCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIE--GELPKELAALADLPMRSILLKNDLEIVKSYMK 469
            Y STRGG  +  F +VV+ GLA DRGL+VP  +P  ++ ELE  RS+++ ELA  ++++FVG+  +P  +L+DI+ RS + FR A V+P+  VG  ++LELFHGPTFAFKDVALQ+LGN FEYFLS  S   G L +LGATSGDTGSAAI GLRGK  + C IL+P GR SAIQERQMTTVPD+NV CVAI+GTFDDCQ+IVKA+F    FR++V LGAVNSINW RVLAQ TYYYW+Y R+TD    I ++ FSVPTGNFGDVLAGYYAK+MGLPV +L+VATN NDILHRFF  G YH+  + +T SPSMDI +SSNFERYLF LAG D   L  WM  FE TG+L+++GDLL +A+ DF S RGD  QTLAT+  +H+ H Y+LCPHSAVGV+A   LS++    TVCLATAH AKFP A  Q+ +E     P ELA L DLP R + L NDL  V+++++
Sbjct:    6 YSSTRGGQTNLAFRDVVMQGLAHDRGLFVPDRLPTVSTTELESWRSLSYAELAVNVIAKFVGDDQVPLPNLRDIVTRSCAAFRDAQVTPLVHVGGHYVLELFHGPTFAFKDVALQMLGNFFEYFLSTGSN-GGRLAVLGATSGDTGSAAIAGLRGKKGITCVILFPNGRVSAIQERQMTTVPDENVHCVAIDGTFDDCQDIVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYLRVTDAHKDIPEVHFSVPTGNFGDVLAGYYAKQMGLPVGKLIVATNENDILHRFFTAGEYHRESIAETISPSMDICVSSNFERYLFHLAGNDASMLSAWMQAFEKTGQLTIQGDLLRQAQADFDSCRGDTSQTLATIETYHQKHQYVLCPHSAVGVYAIHQLSLVSSA-TVCLATAHEAKFPAAVAQV-VEPMPPPPTELAVLRDLPTRRVELPNDLATVQAFVE 466          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: XP_002293628.1 (threonine synthase [Thalassiosira pseudonana CCMP1335] >EED89364.1 threonine synthase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 537.7 bits (1384), Expect = 3.600e-149
Identity = 263/466 (56.44%), Postives = 337/466 (72.32%), Query Frame = 0
Query:    7 YCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQ-LGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRI 472
            Y STRG   + +F   V+ GLA DRGL+VP   P  ++ ELE  R +++ +LA  +++++VGE ++P K L DI+ RS  +FR+ DV+P+ +V   ++LELFHGPTFAFKDVALQ+LGN FEYFLS  S   G L +LGATSGDTGSAAIYGLRGK  V C IL+P GR S IQERQMTTV D N+ CV++EGTFDDCQ+IVKA+F + EFR +V+LGAVNSINW RVLAQ TYY+W+Y R+TD +  + K++FSVPTGNFGD+LAGYYAKRMGLPV  L+VATN NDILHRFF  G YH+ D+ +T SPSMDI +SSNFERYL+ LAG D   L  WM+ FE+TG+L++ G  L++AR DF S R D   TL T++++H    Y+LCPHSAVGV A   L       TV LATAH AKF +A    +    ++PKEL+ L ++  R     ND  +V+++M+ RI
Sbjct:    8 YSSTRGSQSNLSFRTAVMTGLAHDRGLFVPDTFPTVSTSELESWRGLSYADLATEVIAKYVGEDEVPRKVLGDIVRRSCGSFRSGDVTPLVKVDGHYVLELFHGPTFAFKDVALQMLGNFFEYFLSTGSN-GGRLAVLGATSGDTGSAAIYGLRGKKGVDCIILFPDGRVSEIQERQMTTVKDGNIHCVSVEGTFDDCQDIVKASFDNMEFRNKVKLGAVNSINWCRVLAQTTYYFWSYLRVTDAEKDVTKVNFSVPTGNFGDILAGYYAKRMGLPVGDLIVATNENDILHRFFTHGEYHREDIHKTISPSMDICVSSNFERYLYHLAGDDSTTLASWMSAFESTGKLTITGKKLDQARADFKSARADTANTLETIKRYHSEFDYVLCPHSAVGVSAIHQLDTANSA-TVALATAHFAKFGDAVSMAINPLPDIPKELSRLWNMETRKSNCPNDATVVQAFMEKRI 471          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: OEU18609.1 (L-threonine synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 534.6 bits (1376), Expect = 3.000e-148
Identity = 267/468 (57.05%), Postives = 337/468 (72.01%), Query Frame = 0
Query:    7 YCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSID-KLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIE--GELPKELAALADLPMRSILLKNDLEIVKSYMKTRI 472
            Y STRGG  +  F  VV+ GLA DRGL+VP   P    EELE  RS++FP++A  ++S++V E  +PA+ L+DI+ RS + FR  +V+PV  V    +LELFHGPTFAFKDVALQ+LGN FEYFL   S   G L +LGATSGDTGSAAIYGLRGK  V C IL+PKGR SAIQERQMTTV D+N+ CVAIEGTFDDCQ++VK +F   EFR+ V+LGAVNSINW RVLAQITYY+W+Y R+TD +   D K+ +SVPTGNFGD+LAG+YA++MGLP+ +L+VATN NDILHRFF  G YH+ ++ +T SPSMDI +SSNFERYLF L G D  KL   M  FE T +L++ G+LLEKA+ DF S R D   TL  +R+++E H Y++CPH+AVGV A      + +   VCLATAH  KFP+A  ++ I+     P +LA L DLP R     NDL+ V+ +M+  I
Sbjct:    6 YSSTRGGQHNLDFRTVVMTGLAHDRGLFVPDTFPTVEKEELESWRSLSFPDVAVKVLSKYVKEDQVPAEKLEDIVKRSCAAFRHEEVTPVIDVAGHKVLELFHGPTFAFKDVALQMLGNFFEYFLETGSN-GGRLAVLGATSGDTGSAAIYGLRGKKGVDCIILFPKGRVSAIQERQMTTVEDENIHCVAIEGTFDDCQDLVKGSFNSPEFRDRVKLGAVNSINWCRVLAQITYYFWSYLRVTDQEEHKDSKIKYSVPTGNFGDILAGFYARKMGLPIGKLIVATNENDILHRFFTKGEYHREEIAKTISPSMDICVSSNFERYLFNLVGNDTSKLAAMMEDFEITKKLTVTGELLEKAQSDFSSARADTSMTLDIIREYNETHNYVMCPHTAVGVSAIYQTKDVDE-TMVCLATAHEGKFPDAV-KMAIDPLPTPPPQLACLLDLPTRLSECPNDLKSVQDFMEKMI 470          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: EWM29080.1 (threonine synthase [Nannochloropsis gaditana])

HSP 1 Score: 515.0 bits (1325), Expect = 2.500e-142
Identity = 285/568 (50.18%), Postives = 346/568 (60.92%), Query Frame = 0
Query:    6 LYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSG-LDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIE-GTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRI------------------------------------------------------------------------------------TDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEAT---------DQLGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRIPTMDGKE 479
            LYCSTRGG +D TFEEVV+GGLAPD+GLYVPQ +P    E+LE +R  +F ELA  I+   VG +DIP ++L+ +I+ S   FR  +V+PV++VG  W+LELFHGPTFAFKDVALQ LGN+FEYF++K+ G  D  LT+LGATSGDTGSAAI GLRGK NV  F+LYPKGR S +QERQMTTV DKNV C+A+E  TFDDCQ+I+K+AFQDKEFRE+V LGAVNSINWARVLAQ+TYY++AYFR+                                                                                                   TGNFGD LAGYYAK MGLP++++L+ATN NDILHRFF  G Y + +V  T SPSMDI+ISSNFER L+ LAGRD   L+ WM  FE TG L+L    L KAREDF+S R DE   L TM  +   H YLLCPHSAVGV AA  L ML    TVCLATAHP KF +AT         +   IE ++P +L  L  LP RS+ L      V+ Y+   + T++GK+
Sbjct:   89 LYCSTRGGCRDVTFEEVVMGGLAPDKGLYVPQELPYIPPEQLEKLRDASFVELANYIMRLVVGPEDIPPENLRVLIECSTKNFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNVFEYFMAKKKGDPDVKLTVLGATSGDTGSAAIEGLRGKKNVNVFVLYPKGRVSEVQERQMTTVLDKNVHCIAVENATFDDCQSIIKSAFQDKEFREKVCLGAVNSINWARVLAQVTYYFFAYFRVLAQNERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNFGDALAGYYAKAMGLPIDKILIATNENDILHRFFSNGKYWRREVHPTLSPSMDIAISSNFERLLYHLAGRDPDLLREWMEEFERTGRLTLPPPTLAKAREDFVSCRVDEPVMLETMLSFLREHHYLLCPHSAVGVAAAKGLDMLD-AHTVCLATAHPGKFLDATLKHLPVEVAEVEEIEEDMPTQLRELDHLPTRSVTLPASAFYVQKYI---LQTLEGKD 652          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: GAX21624.1 (threonine synthase [Fistulifera solaris])

HSP 1 Score: 514.2 bits (1323), Expect = 4.300e-142
Identity = 262/466 (56.22%), Postives = 329/466 (70.60%), Query Frame = 0
Query:    7 YCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAI-EGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRI 472
            Y STRGG K   F  VV+ GLA DRGL+VP  +P  ++EEL   R +++P+L+  I  +FV E  +P   LKDII RS + FR  DV+PV QV    +LELFHGPT AFKDVALQ+LGN FEYFL   S   G LT+LGATSGDTGSAAI GLRGK  V C ILYP GR S  QE QM TVPD+NV  VA+ + TFDDCQ+ VKA+F    FR++V LGAVNSINW RVLAQ TYYYW+YFR+T    + +  SFSVPTGNFGD+LAG+Y+K+MGLPV++L+VATN NDILHRFF TG Y +  + +T SPSMDI +SSNFERYLF L G D  KLK WMT FE T  LS+    L +A+ DF+S R + ++T+  +  +H++H YLLCPHSAVGV A  +L ++   RTVCLATA   KFP+A  +   +   P E+ AL  LP+R   L  DL+ V++++++R+
Sbjct:    6 YSSTRGGQKKLDFRTVVMQGLAHDRGLFVPDEIPTVSAEELAAWRDLSYPDLSVQIFRKFVKEDQVPLSVLKDIIHRSCAAFRHPDVTPVIQVNGHAVLELFHGPTLAFKDVALQMLGNFFEYFLDTGSN-GGQLTVLGATSGDTGSAAIAGLRGKRGVSCIILYPHGRVSHRQELQMITVPDENVFAVAVKDATFDDCQDFVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYFRVT--SSNAETASFSVPTGNFGDILAGFYSKQMGLPVDKLVVATNENDILHRFFTTGKYERESIQETISPSMDICVSSNFERYLFWLTGNDPAKLKQWMTDFEKTNALSVSPAELRQAQGDFLSSRVNTDETIRVIGDYHKSHNYLLCPHSAVGVKAIHNLKLVSP-RTVCLATADQGKFPDAVRRAVQDPPTPDEIQALEKLPIRRFELAKDLKKVQNFVESRV 467          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: GAX14851.1 (threonine synthase [Fistulifera solaris])

HSP 1 Score: 510.8 bits (1314), Expect = 4.700e-141
Identity = 260/466 (55.79%), Postives = 327/466 (70.17%), Query Frame = 0
Query:    7 YCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAI-EGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRI 472
            Y STRGG K   F  VV+ GLA DRGL+VP  +P  ++EEL   R +++P+L+  I  +FV E  +P   LKDII RS + FR  DV+PV QV    +LELFHGPT AFKDVALQ+LGN FEYFL   S   G LT+LGATSGDTGSAAI GLRGK  V C ILYP GR S  QE QM TVPD+NV  VA+ + TFDDCQ+ VKA+F    FR++V LGAVNSINW RVLAQ TYYYW+YFR+T    + +  SFSVPTGNFGD+LAG+Y+K+MGLPV++L+VATN NDILHRFF TG Y +  + +T SPSMDI +SSNFERYLF L G D  KLK WMT FE T  LS+    L +A+ DF S R + ++T+  + ++H++H YLLCPHSAVGV A  +L ++   R VCLATA   KFP+A  +   +   P E+  L  LP+R   L  DL+ V++++++R+
Sbjct:    6 YSSTRGGQKKLDFRTVVMQGLAHDRGLFVPDEIPTVSAEELAAWRDLSYPDLSVQIFRKFVKEDQVPLSVLKDIIHRSCAAFRHPDVTPVIQVNGHAVLELFHGPTLAFKDVALQMLGNFFEYFLDTGSN-GGQLTVLGATSGDTGSAAIAGLRGKRGVSCIILYPHGRVSHRQELQMITVPDENVFAVAVKDATFDDCQDFVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYFRVT--SSNAETASFSVPTGNFGDILAGFYSKQMGLPVDKLVVATNENDILHRFFTTGKYERESIQETISPSMDICVSSNFERYLFWLTGNDPAKLKQWMTDFEKTNVLSVSPAQLRQAQGDFFSSRVNTDETIRVIGEYHKSHNYLLCPHSAVGVKAIHNLKLVSP-RMVCLATADQGKFPDAVRRAVQDPPTPTEIQVLEKLPIRRFELSKDLKKVQNFVESRV 467          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: OQR86594.1 (threonine synthase [Thraustotheca clavata])

HSP 1 Score: 494.6 bits (1272), Expect = 3.500e-136
Identity = 253/483 (52.38%), Postives = 340/483 (70.39%), Query Frame = 0
Query:    5 TLYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSY----STFRTADVSPVKQV-GSAWILELFHGPTFAFKDVALQLLGNLFEYFLSK-----RSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADS-LSMLQKGRTVCLATAHPAKF-PEATDQLGIEGELPKE--LAALADLPMRSILLKNDLEIVKSYMKTRIPT 474
            T Y STRGGV   +FE+ +L GLA DRGL+VP+ +PK  +  LE   ++++ ELA  ++S F+G+ +IP KDL+ ++ ++Y    S FR   ++PV +V    ++LELFHGPTFAFKDVALQ LG+LFEYFL +     +SG    +T++GATSGDTGSAAIYGLR K NV  FI+YP GR SAIQE+QM  V D+N+  +A++GTFDDCQ IVK  F D EF++   LGAVNSINWAR+LAQI YY++AYFRI+D      K++FSVPTGNFGD+LAG+YA ++GLP+E+L+VATN NDILHRFF TG YH+  V  T SPSMDI +SSNFERYLF L G +   LK WM TFETTG+L++EG LL KA+ + +S    +   L T++++H+ + Y+L PHSA+GV A D+ L        V LATAH  KF P        + ELP+   L AL  LP +S +++N +E+V+ +++  +P+
Sbjct:    3 TTYRSTRGGVNGFSFEQAILSGLAADRGLFVPETIPKLPANALETWANLSYEELAVEVMSLFIGDNEIPRKDLQQLVAKAYKHSDSNFRDPAIAPVVKVKEQLYMLELFHGPTFAFKDVALQFLGHLFEYFLERKNRLEKSGKTHRITVVGATSGDTGSAAIYGLRNKKNVEVFIMYPHGRVSAIQEQQMACVLDENIHNLAVKGTFDDCQAIVKDCFADAEFKQTYSLGAVNSINWARILAQIVYYFYAYFRISD---KSKKIAFSVPTGNFGDILAGFYAMKLGLPMEKLIVATNDNDILHRFFSTGAYHRTGVEHTISPSMDICVSSNFERYLFALCGDNACTLKQWMDTFETTGKLTVEGPLLAKAKAEMVSFSVLQPDVLTTIKEYHQNYSYVLDPHSAIGVAAGDAYLKENDDVNVVVLATAHYGKFMPTVLSAFDTKVELPQHPILKALESLPQKSKVMENSVEVVQDFVREVVPS 482          
BLAST of NO10G02190 vs. NCBI_GenBank
Match: XP_005833845.1 (hypothetical protein GUITHDRAFT_107221 [Guillardia theta CCMP2712] >EKX46865.1 hypothetical protein GUITHDRAFT_107221 [Guillardia theta CCMP2712])

HSP 1 Score: 488.0 bits (1255), Expect = 3.300e-134
Identity = 258/483 (53.42%), Postives = 334/483 (69.15%), Query Frame = 0
Query:    4 RTLYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSL---------SMLQKGRTVCLATAHPAKFPEATDQ-LGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRIPTMDG 477
            + L+ STRG   D +FEE V  GLA D GL VP  +P   S E +  ++++F ELA+ I   +VG+ +IP  DL+D++ RSY+ F+  D+ P K+VG   I+ELFHGPTFAFKDVALQ LGNLFEYFL++ +     +T++GATSGDTGSAAIYGLRGK NV CFIL+P+GR S IQ+ QMT+V D+NV CVA++GTFDDCQ+IVKA F+D +F++   LGAVNSIN+AR++ QITYY++ YF++  F     K+SFSVPTGNFGD+LAGYYAK+MGLPV+ L+VATN NDIL RFF TG+Y K+ V QT SPSMDI ISSNFERYLF L   D   L   M  F  TG LS++   LE+AR DF+SGR  E++TL T+ K+H+   Y L PH+A GV AA+ L         +   K   V L+TAHPAKF  A  +  G   +LP+ LA L +  +R  +L      +K+Y++  IP   G
Sbjct:    8 KMLFRSTRGAFLDMSFEEAVFEGLAQDGGLLVPHFIPD-VSNEYKKWKNLSFHELAYQIAKPYVGD-EIPEADLRDLMKRSYAHFKDKDIVPTKKVGDVHIMELFHGPTFAFKDVALQALGNLFEYFLTRSNKR---ITVVGATSGDTGSAAIYGLRGKKNVECFILFPEGRVSPIQQLQMTSVLDENVHCVAVQGTFDDCQDIVKALFRDLKFKKSYSLGAVNSINFARIMFQITYYFYTYFKV--FPNCDGKMSFSVPTGNFGDILAGYYAKKMGLPVQHLIVATNSNDILDRFFTTGSYDKSPVQQTFSPSMDIGISSNFERYLFYLFDEDSKILAHMMDGFNKTGRLSVDEAHLEEARRDFLSGRCSEQETLDTISKYHKDFNYTLDPHTACGVRAAEQLLDRMEPVCKNASVKHAMVVLSTAHPAKFSTAVQKATGSPPKLPEGLAKLENAEVRFQVLPAKTPSIKNYIEVTIPDPTG 483          
The following BLAST results are available for this feature:
BLAST of NO10G02190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25414.13.400e-24086.26threonine synthase [Nannochloropsis gaditana][more]
CBN76262.16.300e-16261.15Threonine synthase [Ectocarpus siliculosus][more]
XP_002183750.16.500e-15960.56predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002293628.13.600e-14956.44threonine synthase [Thalassiosira pseudonana CCMP1... [more]
OEU18609.13.000e-14857.05L-threonine synthase [Fragilariopsis cylindrus CCM... [more]
EWM29080.12.500e-14250.18threonine synthase [Nannochloropsis gaditana][more]
GAX21624.14.300e-14256.22threonine synthase [Fistulifera solaris][more]
GAX14851.14.700e-14155.79threonine synthase [Fistulifera solaris][more]
OQR86594.13.500e-13652.38threonine synthase [Thraustotheca clavata][more]
XP_005833845.13.300e-13453.42hypothetical protein GUITHDRAFT_107221 [Guillardia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001089NSK001089Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02190.1NO10G02190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586073gene_3996Nannochloropsis oceanica (N. oceanica CCMP1779)gene
TSgene5066Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02190.1NO10G02190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02190 ID=NO10G02190|Name=NO10G02190|organism=Nannochloropsis oceanica|type=gene|length=2583bp
ACACACAGGCCGTGGCGCCCCTGCTTTCGTTTCTGCGACGCCAGTTCAGC
GGTAGTTTGCTGCTTTCCAAGCACTTTGAAGCAGCAGCCTCGTCCACTCC
AGCCTCCAATCCACTCGCAACGGTCTCCCCCCTCCGTCGACCCTCCTTCC
ACACCCACGCAATGGTGGCTCGCACGCTATACTGCTCCACTCGGGGTGGC
GTCAAGGATGCCACCTTCGAGGAGGTGGTGTTGGGCGGACTGGCCCCCGA
CCGTGGGTTGTATGTGCCCCAAGTCATGCCAAAATTTACGTCTGAGGAGC
TGGAGGGGATGCGCAGCATGACGTTCCCCGAGCTGGCCTTCGCCATTGTT
TCGCGTTTTGTGGGAGAGAAGGACATCCCAGCCAAGGATTTGAAGGACAT
TATTGATCGTAGCTACTCCACTTTTCGCACGGCTGACGTCTCGCCGGTGA
AGCAAGTGGGCTCGGCTTGGATTTTGGAGCTTTTCCACGGGCCGACATTT
GCGTTCAAAGACGTGGCCTTACAATTGTTGGGAAATTTGTTTGAGTATTT
CTTGTCAAAGCGTTCGGGTCTGGACGGGTTTTTGACGATTCTGGGTGCGA
CTTCGGGAGATACGGGCTCGGCTGCTATTTATGGCTTGAGGGGGAAGGCC
AATGTTCGTTGTTTTATTCTTTATCCAAAGGGGAGGACTAGCGCGATTCA
GGAACGACAAATGACGACGGTGCCTGATAAAAATGTGCAGTGTGTTGCGA
TTGAAGGGACATTTGATGACTGTCAGAATATCGTGAAAGCGGCTTTTCAG
GATAAGGAGTTCCGGGAGGAAGTGAGGTTGGGAGCCGTGAATTCGATAAA
TTGGGCACGTGTCTTGGCACAGATTACCTACTATTACTGGGCATATTTTC
GTATCACAGACTTTGACCCGTCCATAGATAAGgtaggtgtggtataggga
ggaaggagggaggtttgatttcttcatagaggcatctctcccccgtcgaa
tactaatcctccctccccccttccccccgtttcacacctatagTTGAGCT
TCTCCGTCCCCACGGGTAATTTTGGCGACGTTTTGGCCGGCTACTATGCC
AAGCGCATGGGGCTGCCGGTAGAGCAGTTGCTGGTCGCTACCAACGTGAA
TGACATCTTGCACCGTTTTTTCGAGACCGGGAATTATCACAAGGCAGATG
TGACTCAGACGCACTCACCCTCGATGGATATTTCGATCTCCTCAAATTTT
GAGCGATATCTCTTTGAGTTGGCAGGGAGGGATCATGGCAAGCTGAAGGG
TTGGATGACGACGTTTGAGACAACAGGGGAGCTGAGCTTGGAGGGAGACT
TGCTGGAGAAGGCGCGAGAGGACTTCATTTCGGGCCGGGGAGATGAAGAG
CAGgtgtgttttgattgatcttctccttgaggaaaattagggattggtga
gagaggaaaaatggatttgtatgatttaaaagcagcgaaggacatcacac
acaacctgattcctcctcccaacttcctccccaccaatacagACCCTTGC
CACCATGCGAAAGTGGCACGAGGCCCACGGCTACCTCCTCTGTCCACATT
CAGCCGTCGGAGTACACGCAGCCGACTCGTTGAGTATGCTCCAAAAAGGC
CGCACCGTCTGCCTCGCTACTGCCCACCCGGCGAAATTTCCCGAGGCAAC
CGACCAGCTGGGGATCGAGGGAGAGCTCCCGAAAGAATTGGCAGCCCTGG
CGGATCTACCGATGCGATCCATTTTGTTGAAAAATGATCTGGAAATTGTG
AAGTCATATATGAAGACACGGATCCCGACGATGGATGGGAAGGAATAGAG
AGAGAGGGCGGGAGGGAAGAAAGGAGCGAAGGAGTAAGAATTTAATGAGC
TTTGGTGGAGGAAGGAGAGTCTGATTCGTTGTGATACTGAAGGGAGGACA
CAACCCGTCAGGGGTAAGGGGAAAATTCGAGCGGCATAGTGCGTATCTGC
ATGTGCGTGGCTGAAAGAGATTTTCAAAATGAGATGCATGCCAGTGTAGC
CATGCCCTGAGGGCTAGAACTCATTTTATTTTTTATTTATTTATTTATGT
TGAGAAAAGTAGACCATATGCACGACGACGACTACGACGATGGTTGTGAC
AGCAAGCAGGAAAAAAGACAATCAAAGAAAAAAAGAAAAGGAAACTAAGA
TATGACTAACTATTGATGTATGCGTGTTGCTTGTTGATTCTCCCTCTCTT
CGTCTACCGCTGTCTGCTGGGAACCTTTTTTTATTTTTATCTACTCTCCC
ACCTTTTTATGTGTGTACATGAATGAATGCTGCCCTTCCTACCGGACGCT
GCCCCCACCACGATGCGTTGCGGAAGGCAGTACCCTAGCCCTCGTCGTTG
TCATCTCTTGCCGTCTTCTTCAGAAATCTGCTCGGACGCGCATGCTTGGC
TTCTGAAAAAGAGGCAAAACTATCACCTCCTCTTTGATCTGAAGCAATGA
GCGACAACGAGATAAATCGAAATCTAAAGGCCTCTCCTCTTTCTCCCCCC
TTCTCACTTCCCTCCTTCCCTCTTCGCCCCCCC
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protein sequence of NO10G02190.1

>NO10G02190.1-protein ID=NO10G02190.1-protein|Name=NO10G02190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MVARTLYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGM
RSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVG
SAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGD
TGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGT
FDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITD
FDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFF
ETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFET
TGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVG
VHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIEGELPKELAALADLP
MRSILLKNDLEIVKSYMKTRIPTMDGKE*
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Synonyms
Publications