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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr10 | genome | chr10:599776..602358 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G02190.1 vs.
Match: EWM25414.1 (threonine synthase [Nannochloropsis gaditana]) HSP 1 Score: 840.1 bits (2169), Expect = 3.400e-240 Identity = 408/473 (86.26%), Postives = 440/473 (93.02%), Query Frame = 0
Query: 3 ARTLYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGMRSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGTFDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITDFDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFETTGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVGVHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIEGELPKELAALADLPMRSILLKNDLEIVKSYMKTRIPTMD 476
ART YCSTRG VK+ATFE+VVLGGLAPDRGLYVP+V+P T EL+ MR +TFP LA+AIVSRFVGE+DIPAKDLKDIIDRSYSTFR+ DVSPVKQ+GSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSG + FLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQC+A+EGTFDDCQNIVKAAFQD FREEVRLGAVNSINWARVLAQITYY+WAYFRITDFDPSI++LSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFF TG YHKA+VTQTHSPSMDISISSNFERYL+ELA RDH LK WMT FE TGEL+L G LL++AR+DFISGRGDEEQTLAT+RKWHE HGYLLCPHSAVGVHAADSL ML+ GRTVCLATAHPAKFPEAT++LGIE +LP ELAALAD+PMRSILL NDL V+SY+K+RI +MD
Sbjct: 5 ARTRYCSTRGCVKNATFEDVVLGGLAPDRGLYVPEVLPTLTPVELQAMRCLTFPNLAYAIVSRFVGEEDIPAKDLKDIIDRSYSTFRSPDVSPVKQLGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGAEAFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCIAVEGTFDDCQNIVKAAFQDASFREEVRLGAVNSINWARVLAQITYYFWAYFRITDFDPSIEQLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFVTGEYHKAEVTQTHSPSMDISISSNFERYLYELADRDHTLLKKWMTNFEATGELTLSGQLLKRARQDFISGRGDEEQTLATIRKWHEDHGYLLCPHSAVGVHAADSLGMLRDGRTVCLATAHPAKFPEATERLGIESDLPAELAALADMPMRSILLHNDLVEVQSYVKSRIQSMD 477
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G02190.1 ID=NO10G02190.1|Name=NO10G02190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2333bp
ACACACAGGCCGTGGCGCCCCTGCTTTCGTTTCTGCGACGCCAGTTCAGC
GGTAGTTTGCTGCTTTCCAAGCACTTTGAAGCAGCAGCCTCGTCCACTCC
AGCCTCCAATCCACTCGCAACGGTCTCCCCCCTCCGTCGACCCTCCTTCC
ACACCCACGCAATGGTGGCTCGCACGCTATACTGCTCCACTCGGGGTGGC
GTCAAGGATGCCACCTTCGAGGAGGTGGTGTTGGGCGGACTGGCCCCCGA
CCGTGGGTTGTATGTGCCCCAAGTCATGCCAAAATTTACGTCTGAGGAGC
TGGAGGGGATGCGCAGCATGACGTTCCCCGAGCTGGCCTTCGCCATTGTT
TCGCGTTTTGTGGGAGAGAAGGACATCCCAGCCAAGGATTTGAAGGACAT
TATTGATCGTAGCTACTCCACTTTTCGCACGGCTGACGTCTCGCCGGTGA
AGCAAGTGGGCTCGGCTTGGATTTTGGAGCTTTTCCACGGGCCGACATTT
GCGTTCAAAGACGTGGCCTTACAATTGTTGGGAAATTTGTTTGAGTATTT
CTTGTCAAAGCGTTCGGGTCTGGACGGGTTTTTGACGATTCTGGGTGCGA
CTTCGGGAGATACGGGCTCGGCTGCTATTTATGGCTTGAGGGGGAAGGCC
AATGTTCGTTGTTTTATTCTTTATCCAAAGGGGAGGACTAGCGCGATTCA
GGAACGACAAATGACGACGGTGCCTGATAAAAATGTGCAGTGTGTTGCGA
TTGAAGGGACATTTGATGACTGTCAGAATATCGTGAAAGCGGCTTTTCAG
GATAAGGAGTTCCGGGAGGAAGTGAGGTTGGGAGCCGTGAATTCGATAAA
TTGGGCACGTGTCTTGGCACAGATTACCTACTATTACTGGGCATATTTTC
GTATCACAGACTTTGACCCGTCCATAGATAAGTTGAGCTTCTCCGTCCCC
ACGGGTAATTTTGGCGACGTTTTGGCCGGCTACTATGCCAAGCGCATGGG
GCTGCCGGTAGAGCAGTTGCTGGTCGCTACCAACGTGAATGACATCTTGC
ACCGTTTTTTCGAGACCGGGAATTATCACAAGGCAGATGTGACTCAGACG
CACTCACCCTCGATGGATATTTCGATCTCCTCAAATTTTGAGCGATATCT
CTTTGAGTTGGCAGGGAGGGATCATGGCAAGCTGAAGGGTTGGATGACGA
CGTTTGAGACAACAGGGGAGCTGAGCTTGGAGGGAGACTTGCTGGAGAAG
GCGCGAGAGGACTTCATTTCGGGCCGGGGAGATGAAGAGCAGACCCTTGC
CACCATGCGAAAGTGGCACGAGGCCCACGGCTACCTCCTCTGTCCACATT
CAGCCGTCGGAGTACACGCAGCCGACTCGTTGAGTATGCTCCAAAAAGGC
CGCACCGTCTGCCTCGCTACTGCCCACCCGGCGAAATTTCCCGAGGCAAC
CGACCAGCTGGGGATCGAGGGAGAGCTCCCGAAAGAATTGGCAGCCCTGG
CGGATCTACCGATGCGATCCATTTTGTTGAAAAATGATCTGGAAATTGTG
AAGTCATATATGAAGACACGGATCCCGACGATGGATGGGAAGGAATAGAG
AGAGAGGGCGGGAGGGAAGAAAGGAGCGAAGGAGTAAGAATTTAATGAGC
TTTGGTGGAGGAAGGAGAGTCTGATTCGTTGTGATACTGAAGGGAGGACA
CAACCCGTCAGGGGTAAGGGGAAAATTCGAGCGGCATAGTGCGTATCTGC
ATGTGCGTGGCTGAAAGAGATTTTCAAAATGAGATGCATGCCAGTGTAGC
CATGCCCTGAGGGCTAGAACTCATTTTATTTTTTATTTATTTATTTATGT
TGAGAAAAGTAGACCATATGCACGACGACGACTACGACGATGGTTGTGAC
AGCAAGCAGGAAAAAAGACAATCAAAGAAAAAAAGAAAAGGAAACTAAGA
TATGACTAACTATTGATGTATGCGTGTTGCTTGTTGATTCTCCCTCTCTT
CGTCTACCGCTGTCTGCTGGGAACCTTTTTTTATTTTTATCTACTCTCCC
ACCTTTTTATGTGTGTACATGAATGAATGCTGCCCTTCCTACCGGACGCT
GCCCCCACCACGATGCGTTGCGGAAGGCAGTACCCTAGCCCTCGTCGTTG
TCATCTCTTGCCGTCTTCTTCAGAAATCTGCTCGGACGCGCATGCTTGGC
TTCTGAAAAAGAGGCAAAACTATCACCTCCTCTTTGATCTGAAGCAATGA
GCGACAACGAGATAAATCGAAATCTAAAGGCCTCTCCTCTTTCTCCCCCC
TTCTCACTTCCCTCCTTCCCTCTTCGCCCCCCC back to topprotein sequence of NO10G02190.1 >NO10G02190.1-protein ID=NO10G02190.1-protein|Name=NO10G02190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MVARTLYCSTRGGVKDATFEEVVLGGLAPDRGLYVPQVMPKFTSEELEGM
RSMTFPELAFAIVSRFVGEKDIPAKDLKDIIDRSYSTFRTADVSPVKQVG
SAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGLDGFLTILGATSGD
TGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCVAIEGT
FDDCQNIVKAAFQDKEFREEVRLGAVNSINWARVLAQITYYYWAYFRITD
FDPSIDKLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFF
ETGNYHKADVTQTHSPSMDISISSNFERYLFELAGRDHGKLKGWMTTFET
TGELSLEGDLLEKAREDFISGRGDEEQTLATMRKWHEAHGYLLCPHSAVG
VHAADSLSMLQKGRTVCLATAHPAKFPEATDQLGIEGELPKELAALADLP
MRSILLKNDLEIVKSYMKTRIPTMDGKE* back to topmRNA from alignment at chr10:599776..602358+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G02190.1 ID=NO10G02190.1|Name=NO10G02190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2583bp|location=Sequence derived from alignment at chr10:599776..602358+ (Nannochloropsis oceanica)
ACACACAGGCCGTGGCGCCCCTGCTTTCGTTTCTGCGACGCCAGTTCAGC
GGTAGTTTGCTGCTTTCCAAGCACTTTGAAGCAGCAGCCTCGTCCACTCC
AGCCTCCAATCCACTCGCAACGGTCTCCCCCCTCCGTCGACCCTCCTTCC
ACACCCACGCAATGGTGGCTCGCACGCTATACTGCTCCACTCGGGGTGGC
GTCAAGGATGCCACCTTCGAGGAGGTGGTGTTGGGCGGACTGGCCCCCGA
CCGTGGGTTGTATGTGCCCCAAGTCATGCCAAAATTTACGTCTGAGGAGC
TGGAGGGGATGCGCAGCATGACGTTCCCCGAGCTGGCCTTCGCCATTGTT
TCGCGTTTTGTGGGAGAGAAGGACATCCCAGCCAAGGATTTGAAGGACAT
TATTGATCGTAGCTACTCCACTTTTCGCACGGCTGACGTCTCGCCGGTGA
AGCAAGTGGGCTCGGCTTGGATTTTGGAGCTTTTCCACGGGCCGACATTT
GCGTTCAAAGACGTGGCCTTACAATTGTTGGGAAATTTGTTTGAGTATTT
CTTGTCAAAGCGTTCGGGTCTGGACGGGTTTTTGACGATTCTGGGTGCGA
CTTCGGGAGATACGGGCTCGGCTGCTATTTATGGCTTGAGGGGGAAGGCC
AATGTTCGTTGTTTTATTCTTTATCCAAAGGGGAGGACTAGCGCGATTCA
GGAACGACAAATGACGACGGTGCCTGATAAAAATGTGCAGTGTGTTGCGA
TTGAAGGGACATTTGATGACTGTCAGAATATCGTGAAAGCGGCTTTTCAG
GATAAGGAGTTCCGGGAGGAAGTGAGGTTGGGAGCCGTGAATTCGATAAA
TTGGGCACGTGTCTTGGCACAGATTACCTACTATTACTGGGCATATTTTC
GTATCACAGACTTTGACCCGTCCATAGATAAGGTAGGTGTGGTATAGGGA
GGAAGGAGGGAGGTTTGATTTCTTCATAGAGGCATCTCTCCCCCGTCGAA
TACTAATCCTCCCTCCCCCCTTCCCCCCGTTTCACACCTATAGTTGAGCT
TCTCCGTCCCCACGGGTAATTTTGGCGACGTTTTGGCCGGCTACTATGCC
AAGCGCATGGGGCTGCCGGTAGAGCAGTTGCTGGTCGCTACCAACGTGAA
TGACATCTTGCACCGTTTTTTCGAGACCGGGAATTATCACAAGGCAGATG
TGACTCAGACGCACTCACCCTCGATGGATATTTCGATCTCCTCAAATTTT
GAGCGATATCTCTTTGAGTTGGCAGGGAGGGATCATGGCAAGCTGAAGGG
TTGGATGACGACGTTTGAGACAACAGGGGAGCTGAGCTTGGAGGGAGACT
TGCTGGAGAAGGCGCGAGAGGACTTCATTTCGGGCCGGGGAGATGAAGAG
CAGGTGTGTTTTGATTGATCTTCTCCTTGAGGAAAATTAGGGATTGGTGA
GAGAGGAAAAATGGATTTGTATGATTTAAAAGCAGCGAAGGACATCACAC
ACAACCTGATTCCTCCTCCCAACTTCCTCCCCACCAATACAGACCCTTGC
CACCATGCGAAAGTGGCACGAGGCCCACGGCTACCTCCTCTGTCCACATT
CAGCCGTCGGAGTACACGCAGCCGACTCGTTGAGTATGCTCCAAAAAGGC
CGCACCGTCTGCCTCGCTACTGCCCACCCGGCGAAATTTCCCGAGGCAAC
CGACCAGCTGGGGATCGAGGGAGAGCTCCCGAAAGAATTGGCAGCCCTGG
CGGATCTACCGATGCGATCCATTTTGTTGAAAAATGATCTGGAAATTGTG
AAGTCATATATGAAGACACGGATCCCGACGATGGATGGGAAGGAATAGAG
AGAGAGGGCGGGAGGGAAGAAAGGAGCGAAGGAGTAAGAATTTAATGAGC
TTTGGTGGAGGAAGGAGAGTCTGATTCGTTGTGATACTGAAGGGAGGACA
CAACCCGTCAGGGGTAAGGGGAAAATTCGAGCGGCATAGTGCGTATCTGC
ATGTGCGTGGCTGAAAGAGATTTTCAAAATGAGATGCATGCCAGTGTAGC
CATGCCCTGAGGGCTAGAACTCATTTTATTTTTTATTTATTTATTTATGT
TGAGAAAAGTAGACCATATGCACGACGACGACTACGACGATGGTTGTGAC
AGCAAGCAGGAAAAAAGACAATCAAAGAAAAAAAGAAAAGGAAACTAAGA
TATGACTAACTATTGATGTATGCGTGTTGCTTGTTGATTCTCCCTCTCTT
CGTCTACCGCTGTCTGCTGGGAACCTTTTTTTATTTTTATCTACTCTCCC
ACCTTTTTATGTGTGTACATGAATGAATGCTGCCCTTCCTACCGGACGCT
GCCCCCACCACGATGCGTTGCGGAAGGCAGTACCCTAGCCCTCGTCGTTG
TCATCTCTTGCCGTCTTCTTCAGAAATCTGCTCGGACGCGCATGCTTGGC
TTCTGAAAAAGAGGCAAAACTATCACCTCCTCTTTGATCTGAAGCAATGA
GCGACAACGAGATAAATCGAAATCTAAAGGCCTCTCCTCTTTCTCCCCCC
TTCTCACTTCCCTCCTTCCCTCTTCGCCCCCCC back to topCoding sequence (CDS) from alignment at chr10:599776..602358+ >NO10G02190.1 ID=NO10G02190.1|Name=NO10G02190.1|organism=Nannochloropsis oceanica|type=CDS|length=1437bp|location=Sequence derived from alignment at chr10:599776..602358+ (Nannochloropsis oceanica)
ATGGTGGCTCGCACGCTATACTGCTCCACTCGGGGTGGCGTCAAGGATGC
CACCTTCGAGGAGGTGGTGTTGGGCGGACTGGCCCCCGACCGTGGGTTGT
ATGTGCCCCAAGTCATGCCAAAATTTACGTCTGAGGAGCTGGAGGGGATG
CGCAGCATGACGTTCCCCGAGCTGGCCTTCGCCATTGTTTCGCGTTTTGT
GGGAGAGAAGGACATCCCAGCCAAGGATTTGAAGGACATTATTGATCGTA
GCTACTCCACTTTTCGCACGGCTGACGTCTCGCCGGTGAAGCAAGTGGGC
TCGGCTTGGATTTTGGAGCTTTTCCACGGGCCGACATTTGCGTTCAAAGA
CGTGGCCTTACAATTGTTGGGAAATTTGTTTGAGTATTTCTTGTCAAAGC
GTTCGGGTCTGGACGGGTTTTTGACGATTCTGGGTGCGACTTCGGGAGAT
ACGGGCTCGGCTGCTATTTATGGCTTGAGGGGGAAGGCCAATGTTCGTTG
TTTTATTCTTTATCCAAAGGGGAGGACTAGCGCGATTCAGGAACGACAAA
TGACGACGGTGCCTGATAAAAATGTGCAGTGTGTTGCGATTGAAGGGACA
TTTGATGACTGTCAGAATATCGTGAAAGCGGCTTTTCAGGATAAGGAGTT
CCGGGAGGAAGTGAGGTTGGGAGCCGTGAATTCGATAAATTGGGCACGTG
TCTTGGCACAGATTACCTACTATTACTGGGCATATTTTCGTATCACAGAC
TTTGACCCGTCCATAGATAAGTTGAGCTTCTCCGTCCCCACGGGTAATTT
TGGCGACGTTTTGGCCGGCTACTATGCCAAGCGCATGGGGCTGCCGGTAG
AGCAGTTGCTGGTCGCTACCAACGTGAATGACATCTTGCACCGTTTTTTC
GAGACCGGGAATTATCACAAGGCAGATGTGACTCAGACGCACTCACCCTC
GATGGATATTTCGATCTCCTCAAATTTTGAGCGATATCTCTTTGAGTTGG
CAGGGAGGGATCATGGCAAGCTGAAGGGTTGGATGACGACGTTTGAGACA
ACAGGGGAGCTGAGCTTGGAGGGAGACTTGCTGGAGAAGGCGCGAGAGGA
CTTCATTTCGGGCCGGGGAGATGAAGAGCAGACCCTTGCCACCATGCGAA
AGTGGCACGAGGCCCACGGCTACCTCCTCTGTCCACATTCAGCCGTCGGA
GTACACGCAGCCGACTCGTTGAGTATGCTCCAAAAAGGCCGCACCGTCTG
CCTCGCTACTGCCCACCCGGCGAAATTTCCCGAGGCAACCGACCAGCTGG
GGATCGAGGGAGAGCTCCCGAAAGAATTGGCAGCCCTGGCGGATCTACCG
ATGCGATCCATTTTGTTGAAAAATGATCTGGAAATTGTGAAGTCATATAT
GAAGACACGGATCCCGACGATGGATGGGAAGGAATAG back to top
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