NO10G00910, NO10G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_005854416.1 (Ras-related protein Rab-5C, partial [Nannochloropsis gaditana CCMP526] >EKU21942.1 Ras-related protein Rab-5C, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 359.8 bits (922), Expect = 5.700e-96 Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLA +RRKV+LK+A+EYA ENGLLH ETSAKDAQNVK LFVEIAKRLPKAV PVEREAFPI+APKA+KR CC Sbjct: 71 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLAGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLPKAVAPVEREAFPIVAPKASKRSCC 261
BLAST of NO10G00910 vs. NCBI_GenBank
Match: EWM25322.1 (canine-like rab-type small g protein [Nannochloropsis gaditana]) HSP 1 Score: 359.8 bits (922), Expect = 5.700e-96 Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLA +RRKV+LK+A+EYA ENGLLH ETSAKDAQNVK LFVEIAKRLPKAV PVEREAFPI+APKA+KR CC Sbjct: 41 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLAGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLPKAVAPVEREAFPIVAPKASKRSCC 231
BLAST of NO10G00910 vs. NCBI_GenBank
Match: OEU09425.1 (ras-related small GTPase Rab5 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 309.7 bits (792), Expect = 6.800e-81 Identity = 155/191 (81.15%), Postives = 170/191 (89.01%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++STVKFEIWDTAGQERYRSLAPMYYRGA+AAI+VYDITN +SF GAKSWVKELQRRGDP+V+IALAGNKADL SRRKVE +EAQ YA ENG+LHLETSAK+A NVKALFVE+AK+LPK EREAFP+ AP+ R CC Sbjct: 5 RVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADL-ESRRKVEFEEAQSYAEENGILHLETSAKNANNVKALFVELAKKLPKNAPQPEREAFPLAAPQNDNRNCC 194
BLAST of NO10G00910 vs. NCBI_GenBank
Match: CBJ29030.1 (Rab5, RAB family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 309.3 bits (791), Expect = 8.800e-81 Identity = 155/192 (80.73%), Postives = 173/192 (90.10%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKA-TKRGCC 203 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L+D+TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN ESF GAKSWVKELQRRGDP+VIIALAGNKADL RR+V+ +EA+ YA +NGL+H+ETSAK AQNVK++FVEIA++LPKA V EREAFPI+ P+ K GCC Sbjct: 5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL-EHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195
BLAST of NO10G00910 vs. NCBI_GenBank
Match: GAX23214.1 (Ras-related protein Rab-5C [Fistulifera solaris] >GAX10409.1 Ras-related protein Rab-5C [Fistulifera solaris]) HSP 1 Score: 306.2 bits (783), Expect = 7.500e-80 Identity = 156/191 (81.68%), Postives = 169/191 (88.48%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D+ VKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITN +SF GAKSWVKELQRRGDP+V+IALAGNKADL RRKVE +EA YAAENGLLHLETSAK++ NVKALFVEIAK+LPK EREAFPI+ + K+GCC Sbjct: 14 RVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDAMVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNPDSFAGAKSWVKELQRRGDPNVVIALAGNKADL-EGRRKVEFEEAAAYAAENGLLHLETSAKNSNNVKALFVEIAKKLPKNPPQPEREAFPIMPQQPEKQGCC 203
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_002287308.1 (canine-like rab-type small G protein [Thalassiosira pseudonana CCMP1335] >EED94751.1 canine-like rab-type small G protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 303.9 bits (777), Expect = 3.700e-79 Identity = 150/191 (78.53%), Postives = 168/191 (87.96%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D+TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYDITN +SF GAKSWVKELQRRGD V+IA+AGNKADL +RR+V+ +EA YA ENG+LH+ETSAK+A NVKALFVEIA+RLPK+ +REAFPI+ K R CC Sbjct: 4 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNKADL-EARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFPIMPQKQESRNCC 193
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_002177632.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50446.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 299.7 bits (766), Expect = 7.000e-78 Identity = 151/191 (79.06%), Postives = 166/191 (86.91%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D+TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITN +SF GAKSWVKELQRRGDP+V+IALAGNKADL +RR VE +EA YA ENG+LHLETSAK+A NVK+LF+EIAK LPK E+EAFPI+ + R CC Sbjct: 12 RVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADL-ETRRAVEFEEANAYAQENGILHLETSAKNANNVKSLFIEIAKTLPKNAPQPEKEAFPILQQQQETRNCC 201
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_009040596.1 (hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens] >EGB04682.1 hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]) HSP 1 Score: 297.4 bits (760), Expect = 3.500e-77 Identity = 149/191 (78.01%), Postives = 170/191 (89.01%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ+V LE++TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYDITN ESF GAKSWVKELQRRGDP+VIIALAGNKADL ++R+VE +EA++Y+ ENG+LH+ETSAK+A +VK LF EIA++LPK ER+AFPII PK + C Sbjct: 5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL-QNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPIIPPKHNENKVC 194
BLAST of NO10G00910 vs. NCBI_GenBank
Match: EJK46965.1 (hypothetical protein THAOC_34347 [Thalassiosira oceanica]) HSP 1 Score: 297.0 bits (759), Expect = 4.500e-77 Identity = 150/203 (73.89%), Postives = 169/203 (83.25%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIAL------------AGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKRGCC 203 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D+TVKFEIWDTAGQERYRSLAPMYYRGA+AAI+VYDITN +SF GAKSWVKELQRRGD +V+IA+ AGNKADL +RRKV+ EA +YA ENG+LH+ETSAK+A NVK+LFVEIAK+LPKA +REAFPI+ K R CC Sbjct: 5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFAGAKSWVKELQRRGDQNVVIAMLTGSESDLITRQAGNKADL-EARRKVDFNEANDYAEENGILHMETSAKNANNVKSLFVEIAKKLPKAQQQPDREAFPILPQKQESRSCC 206
BLAST of NO10G00910 vs. NCBI_GenBank
Match: GAY05742.1 (Rab5 family GTPase, putative [Pythium insidiosum] >GAX92189.1 Rab5 family GTPase, putative [Pythium insidiosum]) HSP 1 Score: 295.4 bits (755), Expect = 1.300e-76 Identity = 153/193 (79.27%), Postives = 166/193 (86.01%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATKR-GCC 203 R CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+V+IALAGNKADL +RRKVE +EA +YA +N +LHLETSAK A NVK LFV IAKRLPK EREAFPI P A K+ GCC Sbjct: 5 RTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVNLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADL-EARRKVEFEEAHQYAEDNDILHLETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPTAPKKSGCC 196 The following BLAST results are available for this feature:
BLAST of NO10G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00910 ID=NO10G00910|Name=NO10G00910|organism=Nannochloropsis oceanica|type=gene|length=1178bpback to top protein sequence of NO10G00910.1 >NO10G00910.1-protein ID=NO10G00910.1-protein|Name=NO10G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bpback to top Synonyms
Publications
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