NO10G00870, NO10G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G00870 vs. NCBI_GenBank
Match: EWM25309.1 (hypothetical protein Naga_100135g13 [Nannochloropsis gaditana]) HSP 1 Score: 262.3 bits (669), Expect = 1.500e-66 Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 0 Query: 85 IPGKMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQREDEEKRAGRATPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYMADAEILQLMARFQKLSQEAGIDPSMFPPPPGM 244 +PGKMKV EIKAELDLRGVT AGV +R++LE LLLKAR+EGKARPEILDTFN+QRE EE R G+ PDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKD + +QKYMADAE+LQLMARFQKLS EAG+DPS FPPPPGM Sbjct: 80 VPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGK-KPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQLMARFQKLSAEAGLDPSKFPPPPGM 237
BLAST of NO10G00870 vs. NCBI_GenBank
Match: CBJ32476.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.3 bits (277), Expect = 4.300e-21 Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 0 Query: 88 KMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQ----REDEEKRAGRATPDFDWDAAK---AGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYMADAEILQLMARFQ 225 KM+ EIKAELD+RGV Y G+FE+ +L L++AR G+A P I+D FN++ R D E+ AG A + + K A DG LPGG+ PE L K+ S+ E+M +M NP+LQE+MK VM+ E M++ D E +L+ + + Sbjct: 95 KMRASEIKAELDMRGVGYTGIFEKDELVERLIEARSLGRADPSIIDDFNKENLENRMDPERAAGFADDLLNEEKLKDLTAADGTLPGGMTPEMLSKMVSNPELMVLMQNPKLQEIMKKVMADGPEAMEELQGDPETAELLKKLE 238
BLAST of NO10G00870 vs. NCBI_GenBank
Match: KOO21548.1 (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 64/147 (43.54%), Postives = 90/147 (61.22%), Query Frame = 0 Query: 89 MKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQREDEEKRAGRATP--------DFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYM-ADAEILQLMARFQKL 227 MKV EIKAELDLR V + G+FE+ +L +L KAR EG+A P ++D FN ++ A ATP D D D A A DG LPGG+ P+ LQ T E+M ++ NP+LQ+LM+ +M+ + + + +DAE L++RFQ L Sbjct: 272 MKVSEIKAELDLRKVKWDGLFEKEELAKVLAKARREGRADPLLIDQFNTMSVEQ---AWEATPQTTSEPAADVDLDEATAADGTLPGGMSPDMLQAATQDPEIMALLRNPKLQDLMRKMMAAGPQAASEMLSSDAEARMLLSRFQAL 415
BLAST of NO10G00870 vs. NCBI_GenBank
Match: XP_005761135.1 (hypothetical protein EMIHUDRAFT_371912 [Emiliania huxleyi CCMP1516] >XP_005768960.1 hypothetical protein EMIHUDRAFT_370338 [Emiliania huxleyi CCMP1516] >EOD08706.1 hypothetical protein EMIHUDRAFT_371912 [Emiliania huxleyi CCMP1516] >EOD16531.1 hypothetical protein EMIHUDRAFT_370338 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 105.1 bits (261), Expect = 3.100e-19 Identity = 59/140 (42.14%), Postives = 88/140 (62.86%), Query Frame = 0 Query: 88 KMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQREDEEKRAGRATPDFDWDA---AKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYMADAEILQLMARFQ 225 +M+V E+KAELDLR +Y GV E+ +L +L AR +G A P+I+D+FN+ + A P D DA A A DG LPGG+ PE L KLT E+M ++ NP++Q++MK VMS E + MAD ++ +++ +F+ Sbjct: 57 RMRVSELKAELDLRKQSYEGVMEKDELARMLADARSQGLADPDIVDSFNKANLE---NAYNPQPAVDPDAVAEAVASDGGLPGGMSPETLMKLTQDPELMAMLRNPKMQDVMKKVMSSGPEAAAEMMADPDVAEMLEKFK 193
BLAST of NO10G00870 vs. NCBI_GenBank
Match: XP_002292312.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90287.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 94.7 bits (234), Expect = 4.200e-16 Identity = 53/146 (36.30%), Postives = 87/146 (59.59%), Query Frame = 0 Query: 84 AIPGKMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQREDEEKRAGRA--TPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYMA-DAEILQLMARFQKL 227 ++PG+MK+ EIK+ELDLR V Y F+R LEI L +AR GKA P ++D FN++ + + A D ++A GDG LPGG+ P+ L+ + S E++ ++ +P++QE+MK VM + ++ M D E + + + + Sbjct: 66 SLPGQMKISEIKSELDLRKVNYNDCFDREALEIRLNEARCSGKADPSLIDEFNRRNLEANVKGEDALEVTDNMLESAVGGDGTLPGGLPPDMLKSMMSDPELVNMLRSPKMQEVMKLVMEGGQDALEDAMTNDKEAYECVTKLNSI 211
BLAST of NO10G00870 vs. NCBI_GenBank
Match: GAX29181.1 (hypothetical protein FisN_28Lh010 [Fistulifera solaris]) HSP 1 Score: 87.8 bits (216), Expect = 5.100e-14 Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 86 PGKMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQR---EDEEKRAGRATPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYMADAEILQ 219 PG M+V EIKAELDLR ++YA F++ L L AR +G A P IL+ FN+Q+ + + + PD D +AA A DG +PGG+ P+ QKL ++ E+M ++ + ++QE M +M+ + ++K + + LQ Sbjct: 67 PGMMRVSEIKAELDLRKISYADCFDKESLVERLQGARAKGLADPSILEKFNRQKLEADFDPSKKVEIQPD-DIEAAVANDGTIPGGLTPDMFQKLIANPELMAMLQSTKMQEAMTLMMTGGRDELEKKLKEDPELQ 201
BLAST of NO10G00870 vs. NCBI_GenBank
Match: GAX25542.1 (hypothetical protein FisN_28Hh010 [Fistulifera solaris]) HSP 1 Score: 87.4 bits (215), Expect = 6.700e-14 Identity = 51/136 (37.50%), Postives = 84/136 (61.76%), Query Frame = 0 Query: 86 PGKMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQR---EDEEKRAGRATPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYMADAEILQ 219 PG M+V EIKAELDLR ++Y F++ L L +AR++G A P IL+ FN+Q+ + + + PD D +AA A DG +PGG+ P+ QKL ++ E+M ++ + ++QE M +M+ + ++K + + LQ Sbjct: 70 PGIMRVSEIKAELDLRKISYTDCFDKESLVERLQEARVKGLADPSILEKFNRQKLEADFDPSKKVEIQPD-DIEAALANDGTIPGGLTPDMFQKLIANPELMAMLQSTKMQEAMTLMMTGGRDELEKKLKEDPELQ 204
BLAST of NO10G00870 vs. NCBI_GenBank
Match: EJK60682.1 (hypothetical protein THAOC_18921 [Thalassiosira oceanica]) HSP 1 Score: 86.3 bits (212), Expect = 1.500e-13 Identity = 51/150 (34.00%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 84 AIPGKMKVGEIKAELDLRGVTYAGVFERSDLEILLLKARMEGKARPEILDTFNQQREDEEKRAGRATPDFDW-DAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDNETMQKYM-ADAEILQLMARFQKLSQEAG 232 A PG+M++ EIK+ELDL Y F+R LE L AR +G+A I+D FN++ + + D D A AGDG LPGG+ PE L+ + + +++ ++ +P++QE+MK VMS+ ++++ M D ++ + + R ++ G Sbjct: 75 AEPGQMRISEIKSELDL----YVDCFDRQSLEERLNDARSQGRADESIIDEFNKRNLEASVKGDTFEVSDDMIDKATAGDGTLPGGMPPEMLKSMMNDPDLVNMLRSPKMQEIMKIVMSEGQQSLEDRMKEDKDVYECVQRLNQIMGRLG 220 The following BLAST results are available for this feature:
BLAST of NO10G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00870 ID=NO10G00870|Name=NO10G00870|organism=Nannochloropsis oceanica|type=gene|length=1353bpback to top protein sequence of NO10G00870.1 >NO10G00870.1-protein ID=NO10G00870.1-protein|Name=NO10G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=248bpback to top Synonyms
Publications
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