NO10G00800, NO10G00800 (gene) Nannochloropsis oceanica

Overview
NameNO10G00800
Unique NameNO10G00800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2103
Alignment locationchr10:263182..265284 +

Link to JBrowse

Properties
Property NameValue
DescriptionTranscription factor iiib 90 kDa subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:263182..265284 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0001026obsolete TFIIIB-type transcription factor activity
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
GO:0070897transcription preinitiation complex assembly
GO:0006355regulation of transcription, DNA-templated
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0000126transcription factor TFIIIB complex
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR029529Brf1
IPR011665BRF1_TBP-bd_dom
IPR013150TFIIB_cyclin
IPR013763Cyclin-like
IPR000812TFIIB
Homology
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: ETI53313.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETM52864.1 hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 261.9 bits (668), Expect = 5.300e-66
Identity = 148/329 (44.98%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: ETL99711.1 (hypothetical protein, variant [Phytophthora parasitica] >ETP51113.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 261.9 bits (668), Expect = 5.300e-66
Identity = 148/329 (44.98%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: XP_008900917.1 (hypothetical protein PPTG_08553 [Phytophthora parasitica INRA-310] >ETN13859.1 hypothetical protein PPTG_08553 [Phytophthora parasitica INRA-310] >KUF77158.1 Transcription factor IIIB 90 kDa subunit [Phytophthora nicotianae] >KUF88412.1 Transcription factor IIIB 90 kDa subunit [Phytophthora nicotianae])

HSP 1 Score: 261.9 bits (668), Expect = 5.300e-66
Identity = 148/329 (44.98%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: XP_008900918.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN13860.1 hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 261.9 bits (668), Expect = 5.300e-66
Identity = 148/329 (44.98%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: ETO81993.1 (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 261.9 bits (668), Expect = 5.300e-66
Identity = 148/329 (44.98%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: KUF96645.1 (hypothetical protein AM588_10006315 [Phytophthora nicotianae])

HSP 1 Score: 261.9 bits (668), Expect = 5.300e-66
Identity = 148/329 (44.98%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: XP_009533915.1 (hypothetical protein PHYSODRAFT_347658 [Phytophthora sojae] >EGZ11170.1 hypothetical protein PHYSODRAFT_347658 [Phytophthora sojae])

HSP 1 Score: 261.2 bits (666), Expect = 9.100e-66
Identity = 147/329 (44.68%), Postives = 202/329 (61.40%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV    +K+Y + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATASKSYGNIGTSGRN-YGLESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 306
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: XP_002896899.1 (transcription factor IIIB, putative [Phytophthora infestans T30-4] >EEY66598.1 transcription factor IIIB, putative [Phytophthora infestans T30-4])

HSP 1 Score: 260.8 bits (665), Expect = 1.200e-65
Identity = 153/349 (43.84%), Postives = 209/349 (59.89%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL---RKAQALRDEGKDAKGRG 353
            CP   C  ID+   +  G  +C++C TI+EEN IVSSVEF E S GGA +VVGQFV    +KAY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       +  DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L    +   L  +G+    RG
Sbjct:    6 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSVEFQE-SGGGAHSVVGQFVSATASKAYGNIGTSGRN-YGIESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLHDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEMLLLESEKLPLEQKGQKRLARG 326
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: OWZ11459.1 (Transcription factor IIIB [Phytophthora megakarya])

HSP 1 Score: 260.8 bits (665), Expect = 1.200e-65
Identity = 147/329 (44.68%), Postives = 201/329 (61.09%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CP   C  ID+   +  G  +C++C TI+EEN IVSS+EF E S GGA +VVGQFV      AY + G   R  Y  +SR  TL NG++ I+Q+   LRL   +VD A RLF  A++RNF  GRKT  V+A CLY+VCR + SPH+LIDFSD +QINVYVLG  FLKF +L  ++L +IDPS+YIHRFA++L    +    +++  ALRLVA+M+RDWI+ GRRPSGICGAAL ++A       + +DV  +V +   T+K+R+ EF  TP +  ++ D++  + +S                       E DPPSF R  + +  E L
Sbjct:    5 CPTCSCTEIDV--VDVSGEAVCVSCGTILEENNIVSSIEFQE-SGGGAHSVVGQFVSATAANAYGNIGTSGRN-YGLESRANTLANGKKKIRQIAGMLRLGDHYVDSAFRLFALALQRNFTHGRKTQTVIAACLYIVCRRERSPHLLIDFSDKLQINVYVLGGVFLKFCKLLQIHLPLIDPSLYIHRFASQLNFAGKTH--SIATTALRLVATMKRDWIETGRRPSGICGAALLIAARSQSVMCSLEDVMDVVNIGERTLKQRLYEFSLTP-TAQLTYDQVGKLEMSRV---------------------ECDPPSFQRHREKEVMEML 305
[Close]
BLAST of NO10G00800 vs. NCBI_GenBank
Match: KOO30075.1 (brf1 subunit of RNA polymerase iii transcription initiation factor iiib [Chrysochromulina sp. CCMP291])

HSP 1 Score: 260.4 bits (664), Expect = 1.600e-65
Identity = 151/329 (45.90%), Postives = 203/329 (61.70%), Query Frame = 0 
Query:    7 CPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENSAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPRTYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPRMGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEAL 336
            CPN  C   D+E     G  +C+ C T++EENAIV+ V F ++ AGG S VVGQ+V    T    S+G G      ++SR+   NNG+R I Q+ + LRL +   + A RLF  AV+ NF+QGR+T  V+A CLY VCR++ +PH+LID+SD +Q NVY+LG  FLKF +L  L L +IDPS+YIHRFA+RLE G +     VS  ALRLV  M+RDWIQ GRRPSGICGAAL ++A  H   RT ++V R+VR+   T++KR+ EF +TP+  + +R       L   DI           E  P     ADPPS+TR  + + A+ L
Sbjct:    6 CPN--CGSTDIETDAQRGDAVCIQCGTVLEENAIVNEVTFAQD-AGGGSQVVGQYVA--ATPGVGSSGLG-----FKESRELAFNNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDKTH--LVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLTEFAETPMGALTARQ------LESADI-----------EAFP----AADPPSYTRNRQAEVAQQL 301
The following BLAST results are available for this feature:
BLAST of NO10G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI53313.15.300e-6644.98hypothetical protein, variant [Phytophthora parasi... [more]
ETL99711.15.300e-6644.98hypothetical protein, variant [Phytophthora parasi... [more]
XP_008900917.15.300e-6644.98hypothetical protein PPTG_08553 [Phytophthora para... [more]
XP_008900918.15.300e-6644.98hypothetical protein, variant [Phytophthora parasi... [more]
ETO81993.15.300e-6644.98hypothetical protein, variant [Phytophthora parasi... [more]
KUF96645.15.300e-6644.98hypothetical protein AM588_10006315 [Phytophthora ... [more]
XP_009533915.19.100e-6644.68hypothetical protein PHYSODRAFT_347658 [Phytophtho... [more]
XP_002896899.11.200e-6543.84transcription factor IIIB, putative [Phytophthora ... [more]
OWZ11459.11.200e-6544.68Transcription factor IIIB [Phytophthora megakarya][more]
KOO30075.11.600e-6545.90brf1 subunit of RNA polymerase iii transcription i... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000941NSK000941Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00800.1NO10G00800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670318gene_4140Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100135g10gene5197Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00800.1NO10G00800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00800 ID=NO10G00800|Name=NO10G00800|organism=Nannochloropsis oceanica|type=gene|length=2103bp
ATGGAGCAGATCCTCCGCTGCCCTAACCCGGACTGCCGAGGCATTGACCT
TGAGTACAGCGAACCCGACGGAGCTACTATCTGCATGGCCTGCCACACCA
TCGTAGAAGAAAATGCCATAGTCTCCTCTGTGGAATTCAATGAGAACAGC
GCGGGAGGTGCCTCCACAGTGGTCGGACAGTTCGTCGGACCTGAAATGAC
TAAGGCCTACAGCTCGGCCGGACGGGGTCGTCGTCGCTTTTATGCACGGG
ATTCCCGCGACACCACCTTAAACAATGGCCGCCGTGCCATCCAGCAGGTC
GTCTCGCAGCTTAGACTCCGTCAAGCATTCGTTGACCGTGCCTGTCGCTT
GTTCCGCACGGCAGTGGAACGGAATTTCGTTCAAGGTCGCAAAACGCTGT
GTGTGGTGGCGGTATGCTTGTATATGGTTTGCCGCGAAGACAACTCTCCA
CATATGCTCATCGACTTTTCTGACGCCGTTCAAATCAATGTCTACGTCCT
CGGGCATGCCTTCCTTAAATTCAAGCAGCTCACCGGCCTTAACCTGGCCG
TCATCGACCCTTCCATCTACATCCATCGATTCGCCGCCCGCCTCGAACTC
GGCTCCGAACAAGAACAAACCACAGTGTCCCAGCTTGCGCTGCGCCTAGT
GGCATCCATGCAACGTGATTGGATCCAAGCCGGTCGTCGTCCCTCCGGTA
TCTGTGGCGCGGCCCTCTACCTCTCGGCGATATACCACGAGAAGCCACGG
ACCTACAAGGACGTGGGAAGAATAGTCCGAGTCTCGCCCGACACAATCAA
AAAACGAGTGGATGAATTTGAAAAAACACCAATATCAGGGATGATGAGTA
GAGACGAGCTTGCAAATATGGCGCTGTCAGAGTTTGATATCTCGCCGCGG
ATGGGAGGGGGGGAGGGAGGGAGGGAGGGAGCACCTCGCTTGGTGGGGGA
GGCGGACCCGCCTTCGTTCACAAGGGCTGTGAAGATGAAGGCAGCGGAGG
CGTTAAGAAAGGCACAAGCGCTGAGGGATGAAGGAAAAGACGCAAAGGGG
AGGGGAGAGAGTGGGAAAGAAGAGGAAGAGGTGACGTCGGTGAATGGGCG
GGAATCGTCCACGTCCTCGTCCTCGTCTGCTGCTGCGACTGCGAACAGTA
GCAGGGAGAGAGGTGGTAGCATGGCTGGGGCTCGGAGCAGGAAGAGATCA
AGAAGAGGGGGAGAGGGTGAGGGGGAAGAGGAGGAAAGGGGAAAGGAGGA
CGTGGGGCCGTTAATTCGGGAGGAGAGTGAGGGAGGGACGGAGGAAGTGG
GGTTATACAAGGAGTTGATGGACCAGCTTTTGGATGAAGAGGAGGAGCAA
GCAAATAATAGGGCTGTGGCAGCAGATACAGAACGAGCAGCAGCTCAGGT
GGGGATCAATGGAAGAATAAATAGAGGAGGAGCAGCAGGAGGAGGAGCAG
TAGTGACGATTGCAGCACCTGTGGTGCTTGGGGCAGCAGCAGTCGAGGAA
ATAGAGGAGAAAGAGGATGAGGAGGTGGCGGCAGTGGTGGTGGCGGAGGA
GGAGAAGGAAGAAGAAGAGGAGGTTGATGACACGGCGCAGTATATCCGCT
CGGAGGAGGAGGTGGAAAAATTGAGCAAAGTCTGGCATGAAGTCCACAGA
GGCTACCTGGAAAAGCAAGCGAGGAAGAAAGCCGAAGAAGAAGCAGCCAA
GAAGCGTGCAGAGGAAGATTTCAATTACCGTCAACCGGGCCAAAGCAACC
ACCAGAAGAAGAAGGCGGCTGCAGCAGTGGCTGCTGCGGCGGCGGCCGCC
TCGGTAGTGGGGGCCGGGGGGAGTCGAGCAGCGGGAGGAATGGGGGGAGG
AGGGCCAGCGCGGTCGCCTGCCGAGATTGCTGTATCAAACCATTTGGCCA
AGAAGCGAATTTCAAAGAAGATTAATTATGAGGCGGTCAAGATGTTGGGG
AATGATGATGATATGGATGCATTGCCGCCTGAATTGGAGGCGATTTTGAC
ACAAGGGAGGGATTAGGGGGGGCCCGGGGAAAGCAGGTAGTGAGGATGGG
GTGTACTTTAGTATATACTGCATGATAAAAGAATTAAAAAAGTAGCGGTC
AAT
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protein sequence of NO10G00800.1

>NO10G00800.1-protein ID=NO10G00800.1-protein|Name=NO10G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=672bp
MEQILRCPNPDCRGIDLEYSEPDGATICMACHTIVEENAIVSSVEFNENS
AGGASTVVGQFVGPEMTKAYSSAGRGRRRFYARDSRDTTLNNGRRAIQQV
VSQLRLRQAFVDRACRLFRTAVERNFVQGRKTLCVVAVCLYMVCREDNSP
HMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLEL
GSEQEQTTVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAIYHEKPR
TYKDVGRIVRVSPDTIKKRVDEFEKTPISGMMSRDELANMALSEFDISPR
MGGGEGGREGAPRLVGEADPPSFTRAVKMKAAEALRKAQALRDEGKDAKG
RGESGKEEEEVTSVNGRESSTSSSSSAAATANSSRERGGSMAGARSRKRS
RRGGEGEGEEEERGKEDVGPLIREESEGGTEEVGLYKELMDQLLDEEEEQ
ANNRAVAADTERAAAQVGINGRINRGGAAGGGAVVTIAAPVVLGAAAVEE
IEEKEDEEVAAVVVAEEEKEEEEEVDDTAQYIRSEEEVEKLSKVWHEVHR
GYLEKQARKKAEEEAAKKRAEEDFNYRQPGQSNHQKKKAAAAVAAAAAAA
SVVGAGGSRAAGGMGGGGPARSPAEIAVSNHLAKKRISKKINYEAVKMLG
NDDDMDALPPELEAILTQGRD*
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Synonyms
Publications