NO10G00680, NO10G00680 (gene) Nannochloropsis oceanica

Overview
NameNO10G00680
Unique NameNO10G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1989
Alignment locationchr10:225593..227581 -

Link to JBrowse

Properties
Property NameValue
DescriptionBRCT domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:225593..227581 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003910DNA ligase (ATP) activity
Vocabulary: Biological Process
TermDefinition
GO:0051103DNA ligation involved in DNA repair
GO:0006310DNA recombination
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR036420BRCT_dom_sf
IPR001357BRCT_dom
IPR029710LIG4
IPR012309DNA_ligase_ATP-dep_C
Homology
BLAST of NO10G00680 vs. NCBI_GenBank
Match: EWM25301.1 (BRCT domain protein [Nannochloropsis gaditana])

HSP 1 Score: 290.0 bits (741), Expect = 1.800e-74
Identity = 209/510 (40.98%), Postives = 271/510 (53.14%), Query Frame = 0
Query:  164 MTEKELKAMMERPPGMHFARPRQVAPWVE----GAAEKGGGRRGRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCLYGSTFVTTFPGARGLMGMKEGRETAGGRVE--------FMLADVMRVVKEQGGEASTNLVEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSYEQDFLIVPSGQPCLRTTAAKLTRGIDILSFEWLLECLQAGRRIAPRFEHYIGMTRETEERMHQVVDIFGDPWTDTNGTVKELMKVLQRMPALPFALPTSCAASRGIAPEAAWQRLVEDGGWSAKDESMVLTAVNLFWGRKKVFYLDRYSDCG---PLDGEGRGEE-------------GRK--PLPFTTLDAAMLLLRLHGAVVSSSLHAGVSHIVVDRRERSRFSLLLERKRALRRHPWNACEKRVVGLGWVEGSVAAGYMMGFEEEGEYEGAGEGEGRKFLVSDKELAGG 644
            MT +EL+A+ ERP G+   +    A   E    G  ++GG +R  R V      TPG   G+V   EVKG +F G+ +CLYGS F T  P AR L+G++E                  F + ++ RV+ EQGG+ASTNL+E              XXXXXXXXXXX                                                 + YEQD L+VP+G+PCLRT AA     IDIL  +WL+ECL AGRRI PR+EHY+GM R T  RM  +VD FGDPW    G+   L +V  RMP+L        + SRG +   AW+  V +G W   DE  +L  V  F+  +++ Y DRY+DCG   P  GE   EE             GRK   LPFTTLDAA++LLRLHGA +SSSLHA V+H++VDR ER R+SL+L RKR LRR P  ACEK VV + WV+ S+ AG ++   +EG  E   EG  ++++VSD+EL  G
Sbjct:    1 MTVQELQALRERPGGLWGRQDGHAAKGGEKRGRGQGKEGGRKRRARWVPVSAYATPG---GIV-EAEVKGSLFAGMKICLYGSEFTTRLPNARALVGLEEXXXXXXXXXXXXXXXXGWFSIEELHRVIVEQGGQASTNLMEIEKGPWDGGEGGEEXXXXXXXXXXXDPAVTSEGNRHPNPPFVSPVYGMDIQRSPSPGISKSPPQP---------QRYEQDVLLVPAGRPCLRTQAAIREARIDILVVDWLVECLGAGRRIEPRYEHYVGMDRGTRRRMEGLVDGFGDPWIPREGS--RLEEVFARMPSL--------SPSRGPSLSGAWRCHVREGAW-GDDEDAILRGVVPFYSPRQIIYADRYADCGRVLPPVGEEDDEEATDDKEVGTREAKGRKRHALPFTTLDAAVILLRLHGAKISSSLHANVTHVLVDREERRRYSLILARKRELRRGPHYACEKWVVDVEWVKASLKAGRLLDL-QEGGIEECEEG-CQRYVVSDQELKEG 484          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: XP_005854260.1 (oxidoreductase domain protein, partial [Nannochloropsis gaditana CCMP526] >EKU22101.1 oxidoreductase domain protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 253.8 bits (647), Expect = 1.400e-63
Identity = 169/401 (42.14%), Postives = 219/401 (54.61%), Query Frame = 0
Query:   63 YHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAKDYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGGRRGR---------RKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCLYGSTFVTTFPGARGLMGMKEGRETAGGRVE----------------FMLADVMRVVKEQGGEASTNLVEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSYEQDFLIVPSGQPCLRTTAAKLTRGIDILSFEWLLECLQAGRRIAPRFEHYIGMTRETEERMHQVVDIFG 439
            +HTFARVA GL T +REELQ  LK HW+EGG G++ PPW++P K A   +P +WLD+++AP+ V+SVKG E+V SR  +V  T+RFPRITRLRP+K L GVMT +EL+A+ ERP G+     RQ     +G A KGG +RGR         R+   +P+       G+V   EVKG +F G+ +CLYGS F T  P AR ++G++EG +                       F L ++ RV+ EQGG+ASTNL+E              XXXXXXXXXXXX                                                + YEQD L+VP+G+PCLRT AA     IDIL  +W++ECL AGRRI PR+EHY+GM R T  RM     I G
Sbjct:    3 FHTFARVATGLNTWEREELQNLLKAHWIEGGPGREFPPWIMPWKTATVDIPALWLDVRHAPMVVMSVKGAEMVPSRSYSVEWTLRFPRITRLRPDKALAGVMTVQELQALRERPGGLW---GRQ-----DGHAAKGGEKRGRGQGKEGGRKRRARWVPVSAYANPGGMV-EAEVKGSLFAGMKICLYGSKFTTRLPNARAIVGLEEGGKEXXXXXXXXXXXXXXXXXXXXXWFSLEELHRVIVEQGGQASTNLMEIEKGPWDGGEGGEEXXXXXXXXXXXXPAVTSEGNRHPNPPFVSPVYGMDIQRSPSPGISKSPPQP---------RRYEQDVLLVPAGRPCLRTQAAMREARIDILVVDWMVECLGAGRRIEPRYEHYVGMARGTRRRMEAGYAILG 385          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: CBJ25686.1 (DNA ligase, putative [Ectocarpus siliculosus])

HSP 1 Score: 109.4 bits (272), Expect = 4.400e-20
Identity = 143/651 (21.97%), Postives = 230/651 (35.33%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKK---PPPWVVPSKPAKDYVP-PVWLDIKNAPVKVVSVKGGELVK-SRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERP-------PGMHFARPRQVAPWVEGAAEKGGGRRGRRKVGSMPLLTPGWAAGVVGGVEVKGKVFL------GLNVCLYGSTFV--------TTFPGARGLMGMKEGRETAGGRVEFMLADVMRVVKEQGGEASTNLVEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSYEQDFLIV-PSGQPCLRTTAAKLTRGIDILSFEWLLECLQAGRRIAPRFEHYIGMTRETEERMHQVVDIFGDPWTDTNGTVKELMKVLQRMPALPFALPT--SCAASRGIAPEAAWQRLVEDGGWSAKDESMVLTAVNLFWGRKKVFYLDRYSDCGP------LDGEGRGE-----EGRKPLPFTTLDAAMLLLRLHGAVVSSSLHAGVSHIVVDRRERSRFSLLLERKRALRRHPWNACEKRVVGLGWVEGSVAAG 612
            MKP+Y++ TE+MD+++L   +  G + SG  S+FL GV   N                    Y+  ARV  G    + E+L E LK  W            P      K ++D VP   W+  +++    + VK  E+VK S +  V  T+RFPR+T +R +KG EG +   EL A+  RP                                            +  +A+     V VK KVF+       L +C+ G++F         T    A         R+  GG       D+  +++E GG  + N +  +                                                                              F++V  +    ++   A   +  +++ + W+LEC+       P  EH   ++ E  E    V D FGD +T+      +L K++  +P      PT  +C      A  +    L+E      +D   ++   +  +  K   Y D ++D GP       DG G G+       R+  P  +L +    +R HG  V+ SLHAGV+H+VV   + +R   + +R R L          RVV   WV   +  G
Sbjct:  507 MKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPN------------EDRQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRTGIKKSSRDGVPLTKWIAAEDS--VCLQVKCMEIVKASDWPGVFCTMRFPRVTHIRKDKGSEGCLDTTELAAIQARPRLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSELFASTGGDEVTVKEKVFVAASGRTALELCVVGTSFSGVHVPDVNTIDVDAWWAPAGSTRRKAEGGHEGRTKQDIELLIREHGGTVTANPMPTT-----------------------------------------------------------------------------SFVVVGDTTSVSVKNLIASPKKEYNVVGYRWVLECIHQKAYKFPSMEHVRALSPEAREYFEAVKDDFGDDYTELTDAA-QLSKLMLNIP------PTKRACQGGGKSATPSWLSPLLE---LDDEDAGTLMHGPDFLFAGKCHVYCDLFTDLGPAEPPGGADGNGSGDTTDPRPAREENPTNSLGSTARAVRAHGGEVARSLHAGVTHVVVHPEDTTRIGDIKDRMRDLHHRDDRRFHIRVVKPEWVWECIERG 1056          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: CCA15911.1 (DNA ligase putative [Albugo laibachii Nc14])

HSP 1 Score: 102.1 bits (253), Expect = 7.000e-18
Identity = 140/625 (22.40%), Postives = 239/625 (38.24%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAKDYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGGRRGRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCLYGSTFVTTFPG------ARGLMGMK--EGRETAGGRV--EFMLADVMRVVKEQGGEASTNLVEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSYEQDFLIVPSGQPCLRTTAAKLTRGIDILSFEWLLECLQAGRRIAPRFEHYIGMTRETEERMHQVVDIFGDPWTDTNGTVKELMKVLQRMPALPFALPTSCAASRGIAPE-AAWQRLVEDGGWSAKDESMVLTAVNLFWGRKKVFYLDRYSDCGPLDGEGRGEEGRKPLPFTTLDAAMLLLRLHGAVVSSSLHAGVSHIVVDRRERSRFSLLLERKRALRRHPWNACEKRVVGLGWVEGSVAAGYMM 615
            +KP+YAE T  +DV++LGGYY  G   SG  S FL GV     +  +E              ++TFA++  G    +  +++ +L+ +W        PP +        D  P VW+D + +  KV+ V G EL  S +    LT+RFPR   +R +K      T ++L       P       R  A    G   K    + RR +    ++ P +    +  V  K  +F     C+    + +   G      A  L  M+  E + T   +V  E     V +V+   GG    N VE+S                                                                                +V S    L+    K     ++L+F ++L+C+  G  +      ++  T  T+  + +  D +GD +T T  +V EL ++++ M             S+ ++ E A WQR ++    SA+++ ++    ++      V Y+D++   G      + +E         L  A   L+L+GA+V++S+ + V+HIV+DR+   R   L    +A+RR      E  VV L WV+ S+  G  +
Sbjct:  877 LKPNYAEITTNLDVLILGGYYGTGRRRSGDVSVFLVGVLP---QPLNEDMILKASTLDELPPFYTFAKIGTGYNLEELAQMRRELEPYWQPWDSNNIPPHFSGWQAMRSDLRPDVWIDPRRS--KVLEVYGFELTYSTFYKTRLTLRFPRCHAIRNDKSWYECSTLQDLSIAQGSSP------KRSAADVTIGHQAKKRATQPRRPLQD-KIVAPEYTQAKLENVPKKFDIFRDNEFCVLPGRYSSQDSGLTRDAIAAVLSPMRKDETKFTNEAQVFPELTKQQVEQVIHCFGGRLVQNPVEDSTT-----------------------------------------------------------------------------FVVASSAKGLKFENLKRQGHFNVLNFRYILKCVADGTMMPIGARDFLFATESTQAALAESYDQYGDHYT-TPISVDELRQLIKDM-----------ELSQKVSDEFACWQRRMK-AELSAEEQEVMDYEYSILC--HCVVYVDQFDSIGDTTASSQMDE------CGVLGLAAQQLQLYGALVTTSIDSSVTHIVIDRQH--RVEKLRPIVQAIRR--GGVPEPPVVPLEWVQASIQEGVQL 1387          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: XP_012205277.1 (hypothetical protein SPRG_10651 [Saprolegnia parasitica CBS 223.65] >KDO23955.1 hypothetical protein SPRG_10651 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 85.5 bits (210), Expect = 6.800e-13
Identity = 60/190 (31.58%), Postives = 88/190 (46.32%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKP---PPWVVPSKPAKDYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQV 188
            +KPDYA  T ++DV+++GGYY  G+   G  S FL GV     +  D             V   +F +V +G    + E L+E+L  HW     GK P     W     P  D  P VWL  +++    V + G EL  S     GLT+RFPR+  +R +K     +T  +L A+     G  F++ R +
Sbjct:  461 LKPDYAGMTRQLDVLVIGGYYGSGSRRGGAVSHFLLGVLERTPKASD-----------ASVPVVSFCKVGSGYSLPELEALRERLAPHWRPWEAGKLPEHFEGWT----PKADSRPDVWLAPEDS--VCVEIYGFELTYSSEYQTGLTLRFPRVKAIRYDKNWTDALTLSQLNAL----KGQQFSQKRAI 629          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: KFM81110.1 (DNA ligase 4, partial [Stegodyphus mimosarum])

HSP 1 Score: 83.6 bits (205), Expect = 2.600e-12
Identity = 59/170 (34.71%), Postives = 89/170 (52.35%), Query Frame = 0
Query:    1 MKPDYAET-TEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAKDYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKEL 170
            +KPDY +   +E+D++++GGY+ G    S Y S FL GV A  G  GDE              +H+F +V +G   ++  EL  +L  HW E    KKPP  +V     K+  P VW++   +  ++V VK  E+V+S   T   T+RFPR+ ++R +K     MT  EL
Sbjct:  444 VKPDYIDNLMDELDLLIIGGYF-GEGRRSSYISHFLLGV-AVPGSNGDEPK-----------CFHSFCKVGSGYSLKELYELSGKLGQHW-EPYNPKKPPSCLVIGGGRKEQ-PDVWIEPSKS--QIVQVKAAEIVRSNCFTTNYTLRFPRVEKIRYDKPWYQCMTTTEL 596          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: XP_008903689.1 (hypothetical protein PPTG_10159 [Phytophthora parasitica INRA-310] >ETI48972.1 hypothetical protein F443_07074 [Phytophthora parasitica P1569] >ETK88818.1 hypothetical protein L915_06974 [Phytophthora parasitica] >ETL42213.1 hypothetical protein L916_06924 [Phytophthora parasitica] >ETM48580.1 hypothetical protein L914_06890 [Phytophthora parasitica] >ETN11211.1 hypothetical protein PPTG_10159 [Phytophthora parasitica INRA-310] >ETP18727.1 hypothetical protein F441_07087 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 82.8 bits (203), Expect = 4.400e-12
Identity = 69/243 (28.40%), Postives = 119/243 (48.97%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAK-DYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGGRR---GRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCL 240
            +KPDYA  T ++DV+++GG+Y  G   SG  S FL GV A +  L ++             + +TFA+V  G    + E+++++L+ +W         PP +   KP K D  P VW+D++++  K++ V G EL  +     GLT+RFPR   +R +K     +  ++L A       +   R  +VA   + A ++   R+    RR  G    +   ++   + G+E +  VF G+  C+
Sbjct:  461 LKPDYAGMTTDLDVIIVGGFYGTGRRRSGNVSVFLCGVLAHS--LDEKGAAEATKPGAPCPVVYTFAKVGTGYNLEELEQMRQELEPYWQPWD-DDNVPPHLNGWKPQKSDLRPDVWIDLRHS--KILEVYGFELSFTTLYQTGLTIRFPRCKAIRNDKEWYQCINLQDLNATR---GSLSTKRASEVALGQKSATKRIKKRQTISSRRHSG----ILRDYSRADLDGIEQERNVFEGMEFCV 691          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: ETL95386.1 (hypothetical protein L917_06794 [Phytophthora parasitica])

HSP 1 Score: 82.8 bits (203), Expect = 4.400e-12
Identity = 69/243 (28.40%), Postives = 119/243 (48.97%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAK-DYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGGRR---GRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCL 240
            +KPDYA  T ++DV+++GG+Y  G   SG  S FL GV A +  L ++             + +TFA+V  G    + E+++++L+ +W         PP +   KP K D  P VW+D++++  K++ V G EL  +     GLT+RFPR   +R +K     +  ++L A       +   R  +VA   + A ++   R+    RR  G    +   ++   + G+E +  VF G+  C+
Sbjct:  461 LKPDYAGMTTDLDVIIVGGFYGTGRRRSGNVSVFLCGVLAHS--LDEKGAAEATKPGAPCPVVYTFAKVGTGYNLEELEQMRQELEPYWQPWD-DDNVPPHLNGWKPQKSDLRPDVWIDLRHS--KILEVYGFELSFTTLYQTGLTIRFPRCKAIRNDKEWYQCINLQDLNATR---GSLSTKRASEVALGQKSATKRIKKRQTISSRRHSG----ILRDYSRADLDGIEQERNVFEGMEFCV 691          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: ETO77702.1 (hypothetical protein F444_07143 [Phytophthora parasitica P1976])

HSP 1 Score: 82.8 bits (203), Expect = 4.400e-12
Identity = 69/243 (28.40%), Postives = 119/243 (48.97%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAK-DYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGGRR---GRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCL 240
            +KPDYA  T ++DV+++GG+Y  G   SG  S FL GV A +  L ++             + +TFA+V  G    + E+++++L+ +W         PP +   KP K D  P VW+D++++  K++ V G EL  +     GLT+RFPR   +R +K     +  ++L A       +   R  +VA   + A ++   R+    RR  G    +   ++   + G+E +  VF G+  C+
Sbjct:  461 LKPDYAGMTTDLDVIIVGGFYGTGRRRSGNVSVFLCGVLAHS--LDEKGAAEATKPGAPCPVVYTFAKVGTGYNLEELEQMRQELEPYWQPWD-DDNVPPHLNGWKPQKSDLRPDVWIDLRHS--KILEVYGFELSFTTLYQTGLTIRFPRCKAIRNDKEWYQCINLQDLNATR---GSLSTKRASEVALGQKSATKRIKKRQTISSRRHSG----ILRDYSRADLDGIEQERNVFEGMEFCV 691          
BLAST of NO10G00680 vs. NCBI_GenBank
Match: ETP46650.1 (hypothetical protein F442_07141 [Phytophthora parasitica P10297])

HSP 1 Score: 82.8 bits (203), Expect = 4.400e-12
Identity = 69/243 (28.40%), Postives = 119/243 (48.97%), Query Frame = 0
Query:    1 MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEXXXXXXXXXXREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPPWVVPSKPAK-DYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPRITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGGRR---GRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCL 240
            +KPDYA  T ++DV+++GG+Y  G   SG  S FL GV A +  L ++             + +TFA+V  G    + E+++++L+ +W         PP +   KP K D  P VW+D++++  K++ V G EL  +     GLT+RFPR   +R +K     +  ++L A       +   R  +VA   + A ++   R+    RR  G    +   ++   + G+E +  VF G+  C+
Sbjct:  461 LKPDYAGMTTDLDVIIVGGFYGTGRRRSGNVSVFLCGVLAHS--LDEKGAAEATKPGAPCPVVYTFAKVGTGYNLEELEQMRQELEPYWQPWD-DANVPPHLNGWKPQKSDLRPDVWIDLRHS--KILEVYGFELSFTTLYQTGLTIRFPRCKAIRNDKEWYQCINLQDLNATR---GSLSTKRASEVALGQKSATKRIKKRQTISSRRHSG----ILRDYSRADLDGIEQERNVFEGMEFCV 691          
The following BLAST results are available for this feature:
BLAST of NO10G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25301.11.800e-7440.98BRCT domain protein [Nannochloropsis gaditana][more]
XP_005854260.11.400e-6342.14oxidoreductase domain protein, partial [Nannochlor... [more]
CBJ25686.14.400e-2021.97DNA ligase, putative [Ectocarpus siliculosus][more]
CCA15911.17.000e-1822.40DNA ligase putative [Albugo laibachii Nc14][more]
XP_012205277.16.800e-1331.58hypothetical protein SPRG_10651 [Saprolegnia paras... [more]
KFM81110.12.600e-1234.71DNA ligase 4, partial [Stegodyphus mimosarum][more]
XP_008903689.14.400e-1228.40hypothetical protein PPTG_10159 [Phytophthora para... [more]
ETL95386.14.400e-1228.40hypothetical protein L917_06794 [Phytophthora para... [more]
ETO77702.14.400e-1228.40hypothetical protein F444_07143 [Phytophthora para... [more]
ETP46650.14.400e-1228.40hypothetical protein F442_07141 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000925NSK000925Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00680.1NO10G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670327gene_4151Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100964g2gene5206Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00680.1NO10G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00680 ID=NO10G00680|Name=NO10G00680|organism=Nannochloropsis oceanica|type=gene|length=1989bp
ATGAAGCCTGACTACGCCGAGACGACGGAGGAGATGGACGTGGTGATGCT
GGGAGGATACTATAGAGGGGGCGCGCTCTGGAGCGGTTACCCGAGCCGTT
TCCTCTTTGGGGTGCGGGCTACGAATGGGAGGTTGGGAGACGAGGACGAG
GACGAGGACGGGGACGAAGGAGAGAGGGAGGTGATGTATCATACGTTCGC
CAGAGTTGCGAATGGGCTCAAGACGAGGCAGAGGGAGGAGCTGCAGGAGC
AGCTGAAGGGACATTGGATGGAGGGAGGGGTAGGGAAGAAGCCCCCTCCG
TGGGTCGTGCCCTCAAAACCCGCGAAAGACTACGTGCCGCCCGTGTGGTT
GGACATCAAGAACGCGCCTGTCAAGGTGGTGTCGGTAAAGGGGGGGGAGC
TGGTGAAGAGTCGGTATTCAACGGTCGGGTTGACGGTTCGCTTTCCCCGG
ATCACGAGGCTGAGGCCGGAGAAGGGCTTGGAGGGGGTGATGACGGAGAA
AGAATTGAAGGCGATGATGGAACGACCACCGGGAATGCATTTCGCGCGTC
CACGCCAAGTGGCACCTTGGGTGGAGGGAGCAGCAGAGAAGGGAGGGGGG
AGGAGAGGCAGGAGAAAGGTGGGGAGCATGCCTTTGTTGACGCCAGGGTG
GGCGGCCGGGGTGGTGGGAGGGGTGGAGGTGAAGGGGAAGGTGTTTCTCG
GGTTGAATGTATGCTTGTATGGAAGCACGTTTGTCACGACGTTTCCGGGG
GCAAGGGGGCTGATGGGTATGAAGGAGGGAAGGGAGACGGCAGGGGGGAG
AGTGGAGTTTATGTTGGCAGATGTGATGCGGGTGGTGAAGGAGCAGGGGG
GGGAGGCGAGCACAAATCTGGTGGAGGAAAGCAAGACAATGCGACAGATG
TATGAGGAGGAGGAAGAGGAAGGGGAGGAGGAGGAAAGCGGTGGGCAGGA
AGCGAACGGGAAGGGGAAGGGGGAAGTGGAGGGAAGGGAGGAGGAAGGTA
TCGGCGGGCGCAAGACGAAACGAAAACAACAGGAGAAGGGGAGGAAGAGC
ACAGCCAAGAAGAGAGAGAAAAAGCGACAGAAGAAGAAGGAACCGTGCAA
GAGCTACGAGCAAGATTTTCTCATCGTTCCCTCCGGACAGCCCTGCCTGC
GCACTACCGCCGCCAAGCTGACCCGTGGCATTGACATCCTCTCCTTCGAG
TGGCTGCTGGAATGCCTCCAGGCCGGTCGACGAATCGCCCCACGCTTTGA
ACACTACATCGGCATGACTCGTGAGACGGAGGAAAGGATGCACCAGGTTG
TGGACATATTTGGCGACCCGTGGACGGACACAAACGGAACCGTTAAAGAG
CTGATGAAGGTGTTGCAACGCATGCCTGCCCTTCCGTTCGCCCTTCCTAC
CTCCTGTGCTGCGTCTCGTGGAATTGCCCCAGAAGCGGCTTGGCAGCGGT
TGGTGGAGGATGGGGGGTGGAGCGCAAAGGACGAAAGCATGGTGCTGACG
GCGGTAAACTTGTTTTGGGGGAGGAAGAAGGTCTTCTACCTCGATCGATA
CTCGGATTGTGGGCCTTTGGACGGTGAGGGCAGAGGGGAGGAGGGGCGCA
AGCCGTTGCCATTTACGACGCTGGACGCGGCGATGCTCCTGTTGCGGCTG
CACGGAGCCGTGGTCTCGTCCAGTCTCCACGCAGGAGTCTCGCACATCGT
GGTCGATCGACGAGAGCGTTCGCGTTTCTCTTTGCTGCTGGAGCGGAAGC
GAGCGCTAAGACGGCATCCTTGGAATGCATGTGAGAAGCGGGTAGTAGGC
CTTGGATGGGTTGAGGGAAGTGTGGCGGCGGGGTATATGATGGGGTTTGA
AGAGGAGGGGGAGTATGAGGGGGCAGGCGAGGGGGAAGGGCGGAAATTTT
TGGTGTCGGACAAGGAGCTGGCGGGGGGAGGCGTTGGATTGGGGAATGAG
GAGAAGGAGGAGGATTGTCGCGAAGAGGTGGAGTTCTAG
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protein sequence of NO10G00680.1

>NO10G00680.1-protein ID=NO10G00680.1-protein|Name=NO10G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=663bp
MKPDYAETTEEMDVVMLGGYYRGGALWSGYPSRFLFGVRATNGRLGDEDE
DEDGDEGEREVMYHTFARVANGLKTRQREELQEQLKGHWMEGGVGKKPPP
WVVPSKPAKDYVPPVWLDIKNAPVKVVSVKGGELVKSRYSTVGLTVRFPR
ITRLRPEKGLEGVMTEKELKAMMERPPGMHFARPRQVAPWVEGAAEKGGG
RRGRRKVGSMPLLTPGWAAGVVGGVEVKGKVFLGLNVCLYGSTFVTTFPG
ARGLMGMKEGRETAGGRVEFMLADVMRVVKEQGGEASTNLVEESKTMRQM
YEEEEEEGEEEESGGQEANGKGKGEVEGREEEGIGGRKTKRKQQEKGRKS
TAKKREKKRQKKKEPCKSYEQDFLIVPSGQPCLRTTAAKLTRGIDILSFE
WLLECLQAGRRIAPRFEHYIGMTRETEERMHQVVDIFGDPWTDTNGTVKE
LMKVLQRMPALPFALPTSCAASRGIAPEAAWQRLVEDGGWSAKDESMVLT
AVNLFWGRKKVFYLDRYSDCGPLDGEGRGEEGRKPLPFTTLDAAMLLLRL
HGAVVSSSLHAGVSHIVVDRRERSRFSLLLERKRALRRHPWNACEKRVVG
LGWVEGSVAAGYMMGFEEEGEYEGAGEGEGRKFLVSDKELAGGGVGLGNE
EKEEDCREEVEF*
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Synonyms
Publications