NO10G00330, NO10G00330 (gene) Nannochloropsis oceanica

Overview
NameNO10G00330
Unique NameNO10G00330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6871
Alignment locationchr10:109414..116284 -

Link to JBrowse

Properties
Property NameValue
DescriptionAbc transporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:109414..116284 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR027417P-loop_NTPase
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of NO10G00330 vs. NCBI_GenBank
Match: CBJ27203.1 (putative ABC transporter Nda [Ectocarpus siliculosus])

HSP 1 Score: 655.2 bits (1689), Expect = 3.200e-184
Identity = 373/690 (54.06%), Postives = 460/690 (66.67%), Query Frame = 0
Query:  275 VQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSS----GHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLVDFHDSKLFLSGNGYTLE 961
            ++ Q+ LF  M+ P+FKE+  A+ LLA+V+ALTL +SGVSV FSYIGRDFWTALS K+  +F  M++ F  AL+ GVPV V YR+ R++L+L+WREW+T R+ ++YY+ + YY LEASKEIDNPDQRIAED+RAFT+ SLEF IT LT+ IDL +FS+IL+ IYPQLFIAI+ YA+VGT VTT +G +LVGLNF QLQ EA FRYSL+RVREN+ESIAFYGG   EL E++RRF  ALDN+  VI  QRNLEFFT  YR+LIQV+PG VVAPL+F GK+ELGVVSQSY AFNHIL DLSLIVNQFE+LSAFSAGIDRL EFLE++    RG   +++V     +  R L           L A                     +SPL          ++ G+  P                            GEG       +      GA L +E VSV TP   R+L+  LS RL    R+LIVG SG GKSSLLR MAGLW +GSGKI RP+  EMFFLPQRPYCTLG LRDQ+ YP    S+  +  +G  G +    G        +++ELL +LE V+LG L + MG+G A  GL  + DWS +LSLGEQQRLAF RLLYNKP LAILDE+TSALDL +E +M+ +L  +PG+S VSVGHRPSLV FHD+KL L+  G+ LE
Sbjct:   12 LKTQIGLFVEMSTPFFKEDNGARWLLATVVALTLLNSGVSVAFSYIGRDFWTALSNKDPAQFNIMLQRFLSALIAGVPVTVFYRFEREKLALAWREWMTKRVMEIYYSGQTYYALEASKEIDNPDQRIAEDVRAFTQVSLEFLITVLTSCIDLASFSTILYSIYPQLFIAIIGYASVGTFVTTKLGGKLVGLNFDQLQTEADFRYSLIRVRENAESIAFYGGVQQELNEVQRRFGKALDNFGQVIRAQRNLEFFTTGYRYLIQVLPGFVVAPLFFQGKIELGVVSQSYGAFNHILGDLSLIVNQFESLSAFSAGIDRLGEFLERM----RGMATIANV----TDNKRGL-----------LAAPASTXXXXXXXXXXXXXXTALDSPLKD--------NLLGDDQP--------------------EQDDGPKEGEG----VGVLTTETAKGARLAVEDVSVVTPTGGRVLMSGLSFRLDDSERMLIVGESGAGKSSLLRAMAGLWTTGSGKIVRPTKEEMFFLPQRPYCTLGPLRDQITYPS---SHGGAEAAGEDGDAEAVEGTTEGGSVADDDELLDLLEKVDLGRLAVMMGSGDAHAGLGAVRDWSDMLSLGEQQRLAFARLLYNKPTLAILDESTSALDLANEERMFALLDTLPGLSVVSVGHRPSLVPFHDTKLTLASKGFKLE 647          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: CEM07606.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 622.5 bits (1604), Expect = 2.300e-174
Identity = 363/741 (48.99%), Postives = 463/741 (62.48%), Query Frame = 0
Query:  274 TVQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRA---AGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNS-------SSPTSGIIGSSGHG-------------------------LSDLAQE-----NEELLSILEAVNLGDLPLRMGNGSAV-DGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVL-QAIPGISYVSVGHRPSLVDFHDSKLFLSGNG-YTLEPLPSLLEGREE 972
            T++KQL++F  +A PYF++E+ A+     VI LTL +SGVSV FSYIGRDFW ALS KNE  F  M+  FFGALV G+P+ V Y + R+RL L WR+W+T  +   YYA+R YY +E++KEIDNPDQRIAEDI +FT  SL+FFIT +T+VID +AFS+IL+ I P LF+A   Y++VGT  T T+GR+LVGLNF QLQ+EA  RYSL+RVREN+ES+AFYGGE +E  E  RR   A+ NYRD+I  QRNLEFFTV YR++IQ++P  VVAP YFAG +ELGV+SQSY AFNHILSDLS+ VNQFE +SAFSAG+DRL +F++ ++   R  + + +   T+  Q  +   ++S           RRA   +   G + DLM G   E P      +T SL  +   V L + +                        E     PS +     PGA L +  V V TPD  R L +DLSL L  G  +LIVGNSGTGKSSLLR +AGLW +G G I RP   EMFFLPQRPYCTLGTLRDQL YP+ P   +       SSPTS                                  L  + +E     +E LL+ILE V LGD+  R+     + +GLD + DWS +LSLGEQQRLAF RLL N+P+LA+LDEATSALDL +E  MY+ + + +P ++YVSVGHRPSL+ FH+ KL L  +G Y  E +    E R E
Sbjct:  120 TLRKQLKIFKALAWPYFQKESRARQQFGLVILLTLLNSGVSVLFSYIGRDFWNALSEKNEELFNTMLLRFFGALVAGIPITVFYTFVRRRLGLEWRQWMTTEVMKEYYAHRSYYLIESNKEIDNPDQRIAEDINSFTNVSLDFFITCMTSVIDFLAFSAILYSIDPNLFLAAFLYSSVGTYFTVTIGRQLVGLNFEQLQKEADLRYSLVRVRENAESVAFYGGEEIEGMENERRLNRAVSNYRDIIGVQRNLEFFTVGYRYIIQILPAFVVAPRYFAGAIELGVISQSYGAFNHILSDLSIFVNQFERISAFSAGVDRLGQFVDFLEMQRRRSVAIRNDTLTTATQTEE---VVSNGL--PASGVLRRADTISTAAGSSHDLMMGSTGEIPPSTGEESTISLPPSTAGVWLAKTT--------------EGLFKMPIDEEKENGFPSQIRTLALPGATLVMRDVMVKTPDESRTLTRDLSLTLSEGEHMLIVGNSGTGKSSLLRAIAGLWTNGKGWIERPPPGEMFFLPQRPYCTLGTLRDQLLYPRTPKDKTTDKQGGDSSPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPSIDEEEEYISDESLLAILEKVRLGDMVRRVAEADQLPNGLDAVRDWSDMLSLGEQQRLAFARLLANRPRLAVLDEATSALDLGTEEAMYKTMAEELPRLTYVSVGHRPSLLKFHEQKLRLFPDGTYDFERIMRDAEARRE 841          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: GAX16051.1 (hypothetical protein FisN_20Hh275 [Fistulifera solaris])

HSP 1 Score: 573.2 bits (1476), Expect = 1.600e-159
Identity = 340/704 (48.30%), Postives = 445/704 (63.21%), Query Frame = 0
Query:  275 VQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAG---EGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPT-SGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAI-------------PGISYVSVGHRPSLVDFHDSKLFL-SGNGYTLE 961
            + +Q  LF +MA PY++E    + LLA ++ALTL +SGVSV FSY+G+DFW ALS K+ P FY +++ + GAL+VG PV  +YRY RQRL++ WREW+T R  +LY +NRVYY L+ S  IDNPDQRI ED+++FT  SL+  IT +T++IDLV+FS IL+ IYPQLF+AI+AYAT GT+VTT +GR LV LNF QLQREA  RYSL+R+R+N+ESIAFYGGE LE + +  R      N R +I  +RNLEFFT +YR+LIQ++P  VVAP YFAG + LGV+SQS  AFNHILSDLS+I+NQFE LS FSAGIDRLA F + +++++  R    S           L  + +Q  +  +     R A      G + D M          PTF T A L+   +    V+ SG                           +RP            LQ   + + TPD +RML+++LS  L  G  LLIVGNSG GKSSLLR +AGLW  G+G I RP    ++FLPQRPYCTLG+L+DQL YP    + ++  T    I    H L + + ++++LL ILE VNL ++    G+G  V GL  + DWS  LSLGEQQRLAFGR+L N+P L ILDEATSALD+ SE +MY +LQ +             PG++YVSVGHRPSL+ FHD KL + +G G + E
Sbjct:   73 IGRQFGLFQDMAFPYYEESIRGRWLLAGLLALTLLNSGVSVLFSYLGKDFWNALSAKDIPVFYEVLQKYLGALIVGAPVITLYRYQRQRLAIHWREWMTARTFELYTSNRVYYNLDPS-VIDNPDQRITEDVKSFTSYSLQLVITIITSLIDLVSFSLILWGIYPQLFVAIIAYATFGTVVTTFLGRPLVHLNFKQLQREADLRYSLVRLRDNAESIAFYGGEDLEGQAVEDRLERVTGNRRALIEVERNLEFFTTAYRYLIQIVPVAVVAPKYFAGDIGLGVISQSVGAFNHILSDLSIIINQFEQLSTFSAGIDRLASFYDAMRASDPERASTDS----------GLLKLGNQTSLSVMLTHDDRNATVPFNHGASADFM----------PTFGTIA-LNAWND----VQYSGKSSTPF---------------------NRP-----------VLQAVNLDLCTPDQKRMLIRNLSFELQEGQNLLIVGNSGAGKSSLLRAIAGLWTKGNGSIYRPPDDSVYFLPQRPYCTLGSLKDQLLYPSVDVNTTNGSTFENKIVPKSHLLVE-SLKDKDLLDILEQVNLLEVARNAGDGDPVRGLYAVLDWSNRLSLGEQQRLAFGRVLVNRPTLVILDEATSALDVASEARMYNLLQNLARCELSHQNGLSRPGLTYVSVGHRPSLIAFHDKKLRVGTGEGDSCE 717          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: GAX28950.1 (hypothetical protein FisN_20Lh275 [Fistulifera solaris])

HSP 1 Score: 570.5 bits (1469), Expect = 1.000e-158
Identity = 335/691 (48.48%), Postives = 440/691 (63.68%), Query Frame = 0
Query:  275 VQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKP--PSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAI-------------PGISYVSVGHRPSLVDFHDSKL 951
            + +Q  LF +MA PY++E T  + LLA ++ALTL +SGVSV FSY+G+DFW ALS K+ P FY +++ + GAL+VG PV  +YRY RQRL++ WREW+T R  +LY +NRVYY L+ S  IDNPDQRI ED+++FT  SL+  IT +T++IDLV+FS IL+ IYPQLF+AI+AYAT GT+VTT +GR LV LNF QLQREA  RYSL+R+R+N+ESIAFYGGE LE + +  R      N R +I  +RNLEFFT +YR+LIQ++P  VVAP YFAG + LGV+SQS  AFNHILSDLS+I+NQFE LS FSAGIDRLA F + ++++N  R   +S                       L+ G R A      +V L    R+ + +P  +  ++    T  ++ L   +                         G    P+   V       LQ   + + TPD +RML+++L+  L  G  LLIVGNSG GKSSLLR +AGLW  G+G I  P    ++FLPQRPYCTLG+L+DQL YP      +N S+  + I+  S H L + + E+ +LL ILE VNL ++    G+G  V GL  + DWS  LSLGEQQRLAFGR+L N+P L ILDEATSALD+ SE +MY +LQ +             PG++YVSVGHRPSL+ FHD KL
Sbjct:   74 IGRQFGLFQDMAFPYYEESTRGRWLLAGLLALTLLNSGVSVLFSYLGKDFWNALSAKDIPVFYEVLQKYLGALIVGAPVITLYRYQRQRLAIHWREWMTARTFELYTSNRVYYNLDPS-IIDNPDQRITEDVKSFTSYSLQLVITIITSLIDLVSFSLILWGIYPQLFVAIIAYATFGTVVTTFLGRPLVHLNFKQLQREADLRYSLVRLRDNAESIAFYGGEDLEGQAVEDRLERVTGNRRALIEVERNLEFFTTAYRYLIQIVPVAVVAPKYFAGDIGLGVISQSVGAFNHILSDLSIIINQFEQLSTFSAGIDRLASFYDAMRASNPERASTNS---------------------GLLKVGNRTAL-----SVMLTHDDRN-ATVPFNYGDSSDFMSTFGTIALKAWNDVQY--------------------SGKSSTPTNRPV-------LQAVNLDLCTPDQKRMLIRNLTFELQEGQNLLIVGNSGAGKSSLLRAIAGLWTKGNGSIYSPPDDSVYFLPQRPYCTLGSLKDQLLYPSVDLNATNGSTFENKIVPKS-HLLVE-SLEDTDLLDILEQVNLLEVARNAGDGDPVRGLYAVLDWSNRLSLGEQQRLAFGRVLVNRPTLVILDEATSALDVVSEARMYNLLQNLARRELSHQSGLSRPGLTYVSVGHRPSLIAFHDKKL 707          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: XP_002183362.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45062.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 555.8 bits (1431), Expect = 2.700e-154
Identity = 320/685 (46.72%), Postives = 419/685 (61.17%), Query Frame = 0
Query:  285 MAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYP--KKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQ-------------AIPGISYVSVGHRPSLVDFHDSKLFLSG 955
            MA PY+KE    ++LL  ++ LTL +SGVSV FSY+G+DFW ALS K+  +FY +++ + GAL++G PV   Y+Y R++L++ WREW+T R   LY +NRVYY +E S  IDNPDQRIAED+  FT  SL+  IT LT++IDL++F++IL+ IYPQLF AI+ YA  GT +TT +GR LV LNF QLQ+EA FRYSL+R+R+NSESIAFYGGE LE + I RR    + N R + A QRNLE FT SYR+L+Q++P  VVAP YFAG++ LGV+SQS  AFNHILSDLS+IVNQFE LS+FSAGI+RL+ F + ++ A+  R                                    A +G                 P F+ T                                          G  R  TV         L +E + + TPD +R+L++DL+L+L  G  LLIVGNSG GKSSLLR +AGLW  G+G ++RP   E++FLPQRPYCT+G+LRDQL YP       + +      I    H L D    +EELL +LE V+L ++  R G+G A  GL+ + DWS +LSLGEQQRLAFGRLL N+P+L ILDEATSALD+ SE +MY VL+             + PG++YVSVGHRPSL+ +HD +L L G
Sbjct:    1 MAFPYYKESKTGRILLTGLLGLTLANSGVSVLFSYLGKDFWNALSAKDTADFYNVLQKYLGALLLGAPVATFYKYQREQLAVHWREWMTARTFSLYASNRVYYNIERSNAIDNPDQRIAEDVNTFTAYSLQLVITLLTSLIDLLSFATILWSIYPQLFGAIILYAFGGTFITTLLGRSLVSLNFSQLQKEANFRYSLVRLRDNSESIAFYGGEDLEGQAIERRLENVMGNQRKINAAQRNLELFTNSYRYLVQILPVAVVAPKYFAGEIPLGVISQSVGAFNHILSDLSIIVNQFERLSSFSAGIERLSGFYQAMREADLER------------------------------------ADDG-----------------PLFSRT-------------------------------------FDPHNGAYRDRTV---------LSIEHLDLCTPDQKRLLIKDLNLQLREGENLLIVGNSGAGKSSLLRGIAGLWTVGNGVVSRPVDEEVYFLPQRPYCTIGSLRDQLLYPAINAQEYDGAEANGQKIVPRSHILKD-QWTDEELLLVLEKVDLVEVAERAGDGDATKGLEAVLDWSNMLSLGEQQRLAFGRLLVNRPRLVILDEATSALDMVSEARMYNVLKNMARKELTGSAKLSAPGLTYVSVGHRPSLLAYHDKRLRLMG 585          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: OEU19303.1 (ABC transporter [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 538.5 bits (1386), Expect = 4.400e-149
Identity = 305/665 (45.86%), Postives = 402/665 (60.45%), Query Frame = 0
Query:  303 VIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQ-------------AIPGISYVSVGHRPSLVDFHDSKLFLSG 955
            +I LTL +S VSV FSYIG+DFW ALS KN  EFY+++  + GAL VG P+  +YRY R+RL++ WREW+T R   LY  NRVYY +E  +E+DNPDQRI ED+++FT  SL  F+T ++ +IDLV+FS IL+ IYPQLFIAI+AYA  GT+ TT +G+ LV LN+ QL +EA FR+SL+R REN+ESIAFY GE LE K I    ++ ++N R++IATQRNLEFFT  YRFLIQ++P  VVAP YFAG +ELGV+SQS  AFNHIL+DLS+I+N+FE LS FSAGID     +                                                    N++L+        L P  TT ++   T  S PL+                                                L  + +STPD +R+L++DL++ +  G  LLIVGNSG GKSSLLR +AGLW +G G ITRP+  +++FLPQRPYCT+G+L+DQL YP    +N +             LSD     ++LL+ILE V+LG+L  R G+G  + GL+   DWS  LSLGEQQRLAFGR+L NKP+L I+DEATSALD+ +E +MY +LQ               PG++++SVGHRPSL+ FHD +L L+G
Sbjct:    1 MIGLTLLNSSVSVGFSYIGKDFWNALSAKNADEFYKVLTQYLGALCVGAPIVTLYRYQRERLAIHWREWMTERTLQLYEENRVYYAIERGREVDNPDQRICEDVKSFTSFSLTLFLTIISTIIDLVSFSLILYSIYPQLFIAIIAYAAFGTVTTTFLGKDLVRLNYDQLTKEANFRFSLVRWRENAESIAFYAGEDLEGKTIGENLSSVIENTRELIATQRNLEFFTNGYRFLIQLLPVTVVAPRYFAGAIELGVISQSVGAFNHILNDLSIIINEFEQLSRFSAGIDPTTTTI--------------------------------------------------ANNIELI-------RLSPGTTTASNGYRTPSSYPLI-----------------------------------------------SLNHLDLSTPDRKRILIRDLTMEIHEGENLLIVGNSGAGKSSLLRAIAGLWTAGKGSITRPADEDVYFLPQRPYCTMGSLKDQLLYPSLEKTNDNY------------LSD-----QDLLNILEQVDLGELASRSGDGDPIRGLNACLDWSNNLSLGEQQRLAFGRVLVNKPRLVIVDEATSALDMVAEARMYNLLQDMGRKHVLKNGEMTAPGLNFISVGHRPSLLAFHDKRLRLNG 544          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: XP_002290605.1 (ABC transporter [Thalassiosira pseudonana CCMP1335] >EED92357.1 ABC transporter [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 533.9 bits (1374), Expect = 1.100e-147
Identity = 318/701 (45.36%), Postives = 415/701 (59.20%), Query Frame = 0
Query:  279 LRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLE----ASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAI------------PGISYVSVGHRPSLVDFHDSKLFLS-GNGYTLEPL 963
            L  FW+MA PY++E    + L   +I LTL +SGVSV FSY+ +DFW ALS+K+  EFY MM  F GALVVG PV VMYRY R++L++ WREW+T R   LY +NRVYY LE     SK IDNPDQRI ED+R FT  SL+ FIT +T++IDLV+FS IL+ I PQLF  I+ YA  GTL TT +G  L+ LNF +L+REA  RY L+R+REN+ESIAFYGGE +E KE+  R    ++N R++ A QRNLE FT +Y++LIQV+P  VVAP YFAG ++LGV+SQS  AFNHILSDL++IVNQFE LS+FSAGI+RL+ F+  ++ A+  R         S E              D L +    + G G  +      G+                                                                     A L +  +++ TPD +R L+Q L L +  G  LLIVGNSG GKSSLLR +AGLW SGSG+I R    E++FLPQRPYC LG+L+DQL YP                +  H L      +E+LL +LE V+L +LP R G+G  + G       S  LSLGEQQRLAFGRL+ N+P+L ILDEATSALD+ SE KMY +L+ +            PG++++SVGHRP+L+ +HD+KL L+ G+ Y +E +
Sbjct:  106 LSTFWSMAYPYYQESQPGRRLFYGMILLTLMNSGVSVAFSYVSKDFWNALSSKDVNEFYNMMVKFGGALVVGAPVAVMYRYQREQLAVHWREWMTDRTLQLYNSNRVYYALERDNNQSKRIDNPDQRITEDVRTFTAFSLQLFITVVTSIIDLVSFSLILYSIQPQLFATIIGYALFGTLTTTYIGGSLLPLNFAKLRREADLRYLLVRIRENAESIAFYGGEDVENKEVTSRLGKVVENKREINAAQRNLELFTTAYQYLIQVVPVAVVAPQYFAGTIQLGVISQSVGAFNHILSDLTVIVNQFEQLSSFSAGIERLSTFMTAMRDADPKR---------SNE--------------DGLLSLPAESTGTGAISXXXXXXGQK--------------------------------------------------------------------AVLIINKLNLMTPDRKRSLIQGLDLTVREGENLLIVGNSGAGKSSLLRAIAGLWTSGSGEIARVPDDEVYFLPQRPYCALGSLKDQLLYPSTE-------------AKAHLLRQ-TMSDEDLLKVLEMVDLKELPSRFGDGDPMKG-------SNTLSLGEQQRLAFGRLVVNQPRLVILDEATSALDVVSEAKMYSLLREMAKKELNKGKMSRPGLTFISVGHRPTLIAYHDAKLRLNGGSDYVIESI 694          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: XP_005714526.1 (unnamed protein product [Chondrus crispus] >CDF34707.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 517.3 bits (1331), Expect = 1.100e-142
Identity = 314/688 (45.64%), Postives = 410/688 (59.59%), Query Frame = 0
Query:  281 LFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSG--XXXXXXXXXXXXXXXXXXXXXXGEGGE-DRPSTVDVTIQPGAALQLEGVSVSTPD-YRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLVDFHDSKLFLS--GNGYTLEPL 963
            LFW++A PY++    A+  +A V+ L L  SG+SV FSYI RDFWTAL  K+   F+R +  F   L+  +P+ V Y Y + RL+L+WR+W T +I   Y+A R YY ++    +DNPDQRIAED++AFT  SL FF++ L + IDLV FS ILFRIYP+LFI +  Y+T GT+V T +GRR++ LNFLQL++EA FRYSL+R+REN+ESIAFY GE  E  E  RRF +A+ N  D+I   RNL FFT SY +LIQ++P  ++APLYF G +ELGVVSQS  AF+H+L DLSLIVN+F+ LS FSAGIDRL E  E I +           +    E  R        +F         +    G ++ D   GG  +SP          +   G +    R  G                         EGG  D   +  +T    + + ++ +++ TPD + R+L +DLS  L PG RLLIVG SGTGKSS LR +AGLW+ G G + RP  + MFFLPQRPYCTLG+LR+QL YP   P + SS T                  EEL++ LE VNL  LP RMG      G D   DWS +LSLGEQQRLAF RL   +P+LAILDE +SALD+ SE ++Y  L+   GI Y+SVGHRPSL  +HD  L L   G  + +EP+
Sbjct:   32 LFWSIARPYWRYAPGARASIAWVVFLGLVRSGLSVIFSYISRDFWTALQKKDVAMFWRQITMFSVVLLCALPILVWYGYAKDRLALTWRKWHTEKILGDYFAKRTYYEIDQRGTVDNPDQRIAEDVKAFTSTSLMFFMSVLMSCIDLVNFSIILFRIYPKLFIVLGFYSTFGTVVATLIGRRMINLNFLQLRKEADFRYSLIRIRENAESIAFYSGEGREKVETERRFDSAVLNQLDLIVWTRNLAFFTTSYAYLIQILPLSIIAPLYFTGAIELGVVSQSQQAFHHVLEDLSLIVNEFDRLSQFSAGIDRLGELEEFIYA-----------RFAEGEDRRSKNAKDPDSF--------DKGGVPGLDDSDDGSGGMDDSP-------GVDVHDAGFAKMYGRADGIARYRKLREKATSADDEFAHDLLLAEGGAGDVHISTKITPNGESKVVVKNLTLMTPDKHHRVLFEDLSFTLEPGQRLLIVGPSGTGKSSALRALAGLWNRGRGSVMRPPLSSMFFLPQRPYCTLGSLREQLVYP--TPLHESSAT-----------------EEELIAALELVNLEKLPGRMG------GFDEFRDWSTVLSLGEQQRLAFARLTIGRPQLAILDECSSALDVASEERLYSHLRE-SGIGYISVGHRPSLFQYHDIVLRLGAPGAAHDIEPI 667          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: XP_009037558.1 (hypothetical protein AURANDRAFT_53821 [Aureococcus anophagefferens] >EGB07555.1 hypothetical protein AURANDRAFT_53821 [Aureococcus anophagefferens])

HSP 1 Score: 515.4 bits (1326), Expect = 4.000e-142
Identity = 304/696 (43.68%), Postives = 400/696 (57.47%), Query Frame = 0
Query:  275 VQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQRE------------AFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLVDFHDSKLFLSGNGYT 959
            VQ++LRLFW +A PYFKE   AK+    ++AL L  S +SV FS++GRDF++ALS K++  F      +   L V  P+ V+Y++ RQRL+L+WREW+T  +   YY+++ YY +E  ++IDNPDQR+ ED+ AFTK SL+FFIT +TA IDLV+FS IL+ IYP LF AI  YA VG+  T  +G+ LVG N  QL RE            A  RYSL+R+REN+ESIAFY GE  E  E+  R   A++N R ++ TQRNLEFFT +Y +LIQ++P LVV+PLYFAG +ELGV++QS  AFNH+L+DLS+IVNQFE +S+FSAG++RL+ F                                                                                                                   G +D  + V+ +     AL+LEG+S+STPD +R L +D+S+ +  G  LLI+G+SGTGKSS+LR +AGLWD GSG + RP  A+  FLPQRPYCTLG+LR QL YP    + ++SP  G  G+              LL  L AV LG +        +VD LD + DW   LSLGEQQRL+F R+L N+P LAILDEATSALDLN+E  MY  L  IPGI+YVSVGHRPSL+  H+++L L G G T
Sbjct:   66 VQERLRLFWRLATPYFKEADGAKLQFGLLLALVLAQSSISVIFSFVGRDFYSALSAKDQAVFAEKTLYYAVGLAVATPLTVLYKFQRQRLALNWREWMTTELARQYYSDQAYYKVELERDIDNPDQRLTEDVTAFTKVSLDFFITLMTAAIDLVSFSGILYSIYPNLFYAIFVYAGVGSFTTVQLGKTLVGQNAEQLLREAGPNSNLQLDFNADLRYSLVRLRENAESIAFYQGEQQEEAEVTDRLGKAVENKRGILGTQRNLEFFTTAYTYLIQILPVLVVSPLYFAGTIELGVITQSTGAFNHVLNDLSIIVNQFEGISSFSAGLNRLSTF---------------------------------------------------------------------------------------------------------------DDDHGADDDVARVENSEVADGALRLEGLSLSTPDGQRELFRDVSVAVDRGEHLLIMGDSGTGKSSMLRAVAGLWDRGSGAVVRPPAADTMFLPQRPYCTLGSLRQQLVYPS---TVAASPAGGDDGA--------------LLGALRAVQLGRI------ADSVD-LDDVRDWGDELSLGEQQRLSFARVLVNRPALAILDEATSALDLNNEAVMYGELGKIPGITYVSVGHRPSLLAHHENRLRLLGVGET 626          
BLAST of NO10G00330 vs. NCBI_GenBank
Match: XP_005707961.1 (ABC transporter, ATP-binding & transmembrane domain isoform 1 [Galdieria sulphuraria] >XP_005707962.1 ABC transporter, ATP-binding & transmembrane domain isoform 2 [Galdieria sulphuraria] >EME31441.1 ABC transporter, ATP-binding & transmembrane domain isoform 1 [Galdieria sulphuraria] >EME31442.1 ABC transporter, ATP-binding & transmembrane domain isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 513.5 bits (1321), Expect = 1.500e-141
Identity = 309/670 (46.12%), Postives = 397/670 (59.25%), Query Frame = 0
Query:  275 VQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGXXXXXXXXXXXXXXXXXXXXXXGEGGEDRPSTVDVTIQPGAALQLEGVSVSTP-DYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLV 944
            V + L LFW +A PY+ EET A+  L SV+ALTL  SGVSV FSYIGRDFW ALS KN   F   +  FF A+VVGVP+ V+Y Y+R+ LS+ WREWL+ RI + Y+  R +Y LE++ ++DNPDQRIA+DIRAFT  SL+F +T + + +DL++FS ILF IYP+LF+ ++ YA+VGT +T  +G RL+ L+F +LQ+EA FRY L+R+REN+ESIAFYGGE  E +  + R   AL    D+   QRNLEFFT SYR+LIQV+P  VV+PLYF G + LGV+SQS SAFNHILSDLS+IVN+FE LS FSAGIDRL EFLE ++                                                                     A+ SI  E   L++                               R  T D+       LQL  +S+  P +  R L++D++L++  G RLLIVG SG GKSSLLRV+AGLW  GSG +  PS  +  FLPQRPYCTLG+LR+QL YPK                       +   ++EL+ +LE V+L DL  R  +      LDV+ DWS  LSLGEQQRLAFGRLL ++PK  ++DEA+SALDL SE+K+Y  LQ    I YVSVGHRPSL+
Sbjct:   83 VNRLLTLFWQVAKPYWLEETKARWELGSVVALTLLQSGVSVAFSYIGRDFWNALSEKNLENFQHEIILFFTAMVVGVPIFVLYSYFREILSIHWREWLSDRILNKYFEKRGFYYLESNSQVDNPDQRIADDIRAFTNTSLQFILTFIISAVDLISFSVILFSIYPELFLVLIGYASVGTYLTYYIGNRLILLHFDRLQKEADFRYVLVRIRENAESIAFYGGENREQELAKSRLNKALSRTIDIAKLQRNLEFFTNSYRYLIQVLPAWVVSPLYFQGAIGLGVISQSISAFNHILSDLSIIVNRFEQLSQFSAGIDRLGEFLEVLE---------------------------------------------------------------------ANESIGIEKDALIQ-------------------------------RRETEDI------VLQLCNISIMIPSEEPRYLIRDVNLKVERGQRLLIVGASGKGKSSLLRVIAGLWKCGSGTVRCPSLKDTCFLPQRPYCTLGSLREQLIYPKT-------------------RQQVNYTDQELIQVLEKVDLLDLFERYND------LDVVRDWSDTLSLGEQQRLAFGRLLLSRPKFVLMDEASSALDLKSEKKLYSFLQESDTI-YVSVGHRPSLL 620          
The following BLAST results are available for this feature:
BLAST of NO10G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ27203.13.200e-18454.06putative ABC transporter Nda [Ectocarpus siliculos... [more]
CEM07606.12.300e-17448.99unnamed protein product [Vitrella brassicaformis C... [more]
GAX16051.11.600e-15948.30hypothetical protein FisN_20Hh275 [Fistulifera sol... [more]
GAX28950.11.000e-15848.48hypothetical protein FisN_20Lh275 [Fistulifera sol... [more]
XP_002183362.12.700e-15446.72predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU19303.14.400e-14945.86ABC transporter [Fragilariopsis cylindrus CCMP1102... [more]
XP_002290605.11.100e-14745.36ABC transporter [Thalassiosira pseudonana CCMP1335... [more]
XP_005714526.11.100e-14245.64unnamed protein product [Chondrus crispus] >CDF347... [more]
XP_009037558.14.000e-14243.68hypothetical protein AURANDRAFT_53821 [Aureococcus... [more]
XP_005707961.11.500e-14146.12ABC transporter, ATP-binding & transmembrane domai... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00330.1NO10G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586863gene_4186Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101559g2gene5243Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00330.1NO10G00330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00330 ID=NO10G00330|Name=NO10G00330|organism=Nannochloropsis oceanica|type=gene|length=6871bp
ATGCGCGGACTTGCGAGGGCTCCCTCTTTATCCACACCCAGTGCTACTCC
CACCGCCTCTATTATCACCACACCCCGACTGCGTCTCAAGCAGCCCCAAG
GTCTTTCCCTCCTCCTCCTTTCCGTCCTTCTCCTCCTCTTTGTCGCCAGC
GAAGCATTCGTCTTCCTCCCTCCGCCGTCAAGTCGCCTCGCAATCCCTCC
CAGACTGCAGCAGTGTCCCTCGACCCTTCTAGgtgagtgatgacgacagg
ggccataaagatgacaaccgcggcttttaatgcttcccctctcccccctt
tctcgccaatttcttcatatatatacgttgatacatgtatttatgtgtgg
gcacgcgttgttcaaacctcgggactcgcctcactgcgggcatgaccctt
gcccgcacactctcttcttcccgcactgcccacgcggaaatgcgccccct
ctcgctcgtatcacactccttcctcttaccctcaccatacctagGACCAA
TGGAACGCTACACATCGGGCAAGCATCGGGGCAGCGGTGGCTCCGGTGGC
TCAGGCGGCAACAGCAGCCCCCTCCGTTTTAAAAAGAAGGATCAGAACGA
CCACGATAGgtgcgtgccttggtatcctgcctccctccctccctccctcc
ctccctccctccctccctccctccctccttctctccctccctccctcttc
tttattcccccctcagacttgacaatatcctaatcctttgtatcctctcc
cactcatttggcaagaagaccgtttcccttttctgtctgttactaccacc
cctaccacgccttcctccttccctccttccctcgtcccctacctacctac
ctaacagCGACGAAGAAGGTGGCGAAATTGATGGCTTACCCTCCTCCTCC
ACCTCCTCCCCTCTGCGTGGAAAAGGCGCGAATAATGGGAATTACAAGAC
CCTGCCTGTCGCTGTGGATGACgtagggagggagggagagagggagggag
ggagggaatgattggcttgtcaaatacgctcacaatctacacctatatat
tgaaaaagtcacaggattcctcttttcccctatctattcttcagGATGGT
GGCGCCGACGGCCTGGATGTCCTCATCTCCTCTTCTAACCCTGTTGCAGG
TATAGCCAAGAACAACAGCAGCAGCAGCAGTAGCAGCAGCACCGCCCGCC
TCCGGCATGGTCCTTCCTCTGTCCCTCCCTCCCTCGCTTCCTCCCCCTCC
TCCCTTAAAGACGTCGATCTGATCTCGCCCGTTAACGAACGCGGCTTGTC
GTTGGAAGGAGGAGGAAAAGAGGAAGATGCTGCAGGAGGAGGAGGAGGAG
GAGGGGGGGGCGGTAACGGCGGCCTGAAACGGTTTTTCAAAGCCAACCCG
AAGGCGCCCTCCTCTTCAGgtctgagtggatgcccccacatataaatgac
gacgactgaagggggggggaagggagggaggaagagaagggcatgtgtat
gtgactgtgtgaattttttgcacgcattgaggaaatcaccaaagaccgac
ggggtggtctctcaccaccgcccttccctccctccttctctccctccctc
ccttcctagGCCGTGGCGGGAAGTATTACTTCCAGGATGACACTGTACAA
AAGCAGCTTCGATTGTTCTGGAACATGGCCGTGCCGTACTTCAAGgtagg
gagggagggagagaaggagggaggaagaaggggagggagggagggaggga
agaagggcggcccatagtgagatgtcatgggcctgtaaggcaaggattct
aaagtcgccctccctcccttcctccctctctccctccctcctccctcctc
cctcctcctttccccctccctccctccctcccccctccctcccccttcca
ttacctcacagGAGGAAACAGCTGCCAAGGTTTTACTGGCTTCTGTGATT
GCCTTAACCCTGACCTCAAGCGGCGTGTCGGTATGGTTCTCGTACATAGG
CCGCGATTTCTGGACGGCTTTATCCACCAAGAACGAGCCGGAgtaaggag
ggagggagggagggagggagggagggaggggggggagaaacgaggaggaa
gggttggaaatgagaagaaaggaggggaggagggagggtgggaggaaggg
gggaagggagaaattgtgtttcctgtttctttcacatgcctgcctgccga
ggagctcacctgtcctccctccctccctccctaaccccctcccttcctcc
ctccctccctccctcagATTCTACCGGATGATGCGCACCTTTTTCGGGGC
CCTGGTCGTGGGCGTGCCGGTGAACGTCATGTACAGGTACTACCGGCAGA
GGCTGTCGCTGTCCTGGCGGGAGTGGCTCACGGGCCGTATCACGGACgta
aggagtggaggagggagggagggagggagggagggagggagggagggagg
gagaataaggttcagatttcggggatgcgtttcccctgggaaggatggtg
ggagggagggaggagggtgagagggtgaggcggccggggagggctcttgc
gttccttcgcgcactccctccctccctctctcccttcctcaccgagccct
actactataccttcgaagggagcacaagaaaccgacattctccctccccc
ctccctccccccctttcagCTCTACTACGCGAATCGTGTCTACTACACCC
TCGAGGCCTCCAAAGAGATCGACAATCCCGACCAGCGGATCGCCGAGGAC
ATTAGGGCCTTCACCAAGgcaagccctccctccctccctccctccctccc
tccctccctccctccctccctccctccctccctccctccctccctctttt
ccgccgtcgtgcccacctcttcccctcctccctgtacccccccttcaact
tccttccctccctccctcccccctccctcctgctccctcatccccaaaac
ccgcctcctctttccctcctccttcaaacttccctctcacacagGACTCC
CTCGAATTCTTCATCACGGCTCTCACCGCCGTTATTGACCTTGTGgtagg
tcccctccctccctccctccctccctccctccctccctccctccctccct
catgtcttccctcacccccactctccagGCCTTCTCTTCCATCCTCTTCC
GGATCTACCCCCAGCTCTTCATTGCCATCCTCGCCTATGCCACCGTTGGT
ACTCTCGTCACAACCACCGTCGGTCGCCGTCTCGTCGGACTGAACTTTTT
GCAGCTGCAGgtacacggctatccgccctccctccctccctcccttcctt
tcttatttcgtgtctccctccctccctccctccctattttgacccctccc
tccatcctccctcccctcccctcctccctctcgtcttccgtttcttcctc
tcgcgtgtccgtaagaaaacgcgagtccgtcatggctatcgtccactcac
cttccctccctccctccctccctccctccctccctccctccctctcttcc
tcagCGCGAGGCCTTCTTCCGGTACTCCCTCATGCGCGTGCGGGAGAACA
GCGAGTCCATTGCGTTCTACGGAGGCGAAATGCTGGAGCTGAAGGAGATA
AGGCGTCGATTCACGgtagggagggagggagggaggcgagatgctggagc
tgaaggaggttaagcgctgactcacgctagaggcatggaagggagggcgg
gagggagggagggagggcgggagggagggggacttatccgtgctaacaaa
acgatcttctgacagGCGGCCTTGGACAACTATCGTGACGTCATCGCCAC
TCAGAGGAACCTCGgtaagcccctcactccctccctcccttcctccctcc
cgccctgctgtccctccaccccactaaccctccctttctccttcccttcc
tccttccatccctcccccctcccccccctccatagAGTTCTTCACGGTCA
GCTATCGTTTCCTCATTCAAGTCATTCCGGGACTGGTCGTCGCTCCTCTC
TACTTCGCTGGCAAGgtgctcaatcccctcccgccctccccccttccccc
cctccctccctccctccctctccaggtggagttgggcgtggtttcccaat
cctattccgccttcaatcacatcctctccgacctctccctctcacccccc
tccctcccccccttcctccctcccttctccctccctccctctccagGTGG
AGTTGGGCGTGGTTTCCCAATCCTATTCCGCCTTCAATCACATCCTCTCC
GACCTCTCCCTCATTGTCAATCAATTCGAAGCCCTCTCCGCGTTCTCCGC
CGGTATTGACCGCCTCGCTGAATTCCTTGAGAAGATCCAGgtaagtcatt
ccctccctccctcccaccctccctcccacccttcctccttcccttcctcc
cttcctccttccttcccttctttccctcccccaaaaatcaacatacatca
ttcctctccctccccccctccccccttcccctcctcattccagTCGGCGA
ACCGCGGTCGTATGGGCCTATCCTCCGTCAAGGGCACCTCGAAAGAGCAG
ATGCGGGACCTGAGGACTATCCTCTCTCAAGCCTTCATCGACGAGCTGCA
GGCAGGGCAGCGACGGGCGGCAGGAGAGGGCGGGGAGAACGTCGATTTGA
TGGgtaaggacggagggagagagggagagagggaggaaatgatcgaccac
cattgatgcctatgcctgtcatcataccgtccctccctccctccctccct
ccctctctccctccctctattccctcagGCGGCGGTCGTTCCGAGAGCCC
CCTCCCTCCCACCTTCACCACCACCGCCTCTTTGTCCATCACGGGCGAGT
CCGTCCCTCTGGTCCGAGGCAGCGGCCGAGGAAGCGGCGCAGCAGCGCTT
GCCTCGGCAGCGGGAGGAGGGGTGAGCGGTGCCGTGAGTAGCGGGGAGGG
AGGAGAGGACAGgtgcgttgtggggagggagggagggagggagggagtag
cgggagggatgatcccctggtgtggtcaatcgtggtttcatttcgttctc
cccttccccctccctccctccctccctccctccctcagACCCAGCACGGT
GGACGTGACGATCCAGCCGGGCGCGGCGTTGCAGCTGGAAGGCGTTTCCG
TCTCGACTCCCGACTATCGACGCATGCTGgtagagagggagggagggagg
gagggagggagggaggttgttgggaagatgcatatgcgatttctggtagg
cttattaccctccctccctccctccctccctccccccctctccctccctc
cctcccttcccttcttcagGTCCAGGACCTCTCCCTCCGCCTCCCCCCCG
GAGGCCGCCTCTTGATCGTGGGAAACAGCGGCACGGGCAAATCATCCCTC
TTGCGCGTTATGGCGGGGCTGTGGGACTCGGGAAGCGGAAAGATCACGCG
GCCTTCCACCGCCGAAATGTTCTTCTTGCCTCAGgtacgcgcctccgctc
cgccatcctcccccctccttctccctcttgtacttgtcaaacctcctgct
ttgttgatacgccttggacgtccctcctcctcctcctcctcctcctcctc
ctcctcctcctcctcctcctcctcctcctcctcacttatcaaacctctgt
catcgatacctcctacttttcaggcttacctcttataccgcaccctcctt
ccctccctcccttccactctccctccctccctcccagCGGCCCTACTGCA
CCCTCGGCACGCTCCGAGACCAGCTCCACTACCCGAAGAAGCCTCCCTCC
AACTCCTCCTCCCCCACCTCCGGTATCATCGGCAGTAGCGGTCACGGCCT
GTCAGATCTGGCACAGGAGAACGAGGAACTGCTTTCCATTCTCGAGGCTG
TCAATCTGGGGGATCTGCCTCTTCGgtatgtgcgcaccctccctccctcc
ctccctccctccctccttccatcctgtacgagtttcccctcgtgctgttg
tgttgatctcgctcgcttatcctccttccctccctccctccctccctccc
tccctccctccttctttcccggaacagCATGGGTAACGGTTCAGCCGTCG
ACGGTCTGGACGTTATGACGGACTGGAGCGGCATCCTTTCGTTGGGGGAA
CAGCAACGCCTGGCCTTTGGGCGACTGCTGTACAACAAgtaggagaaacg
gagggagggagagggagggggagggagggagggagggagggagggaagac
aagacgatgtattcagagggagaagattcaatcgtcaagataggccaaat
cgattcagcctttcctgcttcttcattcttgctcatctcaccctttttat
cctccctccctcccccgtagGCCCAAGCTCGCTATCCTCGACGAGGCGAC
GTCCGCGCTCGATCTTAACTCTGAGCGTAAAATGTACGAGGTTCTTCAGG
CCATTCCCGGCATCAGCTATGTCTCAGgtatgcccttccctccctccctc
cctccctccctccctccctccctccttccctccctcttccacaggccacc
ctctattttgttgtccgtcgtcattcgtacagttatcgtcacgttaactc
acccgtccctgcttccctccttccttccctgcttccctcccttcctttct
ccttccttcccttctttcctcttgcagTGGGCCACCGCCCCTCTCTCGTC
GACTTCCACGACAGCAAGCTCTTCCTCTCCGGTAACGGCTACACTCTTGA
GCCATTGCCTTCCTTGTTGGAAGGGAGGGAGGAAGTGAGGGAGAGCAGTA
GCAGCGGCAACAGTGGCATGGGCAGTAAAGGGAGAAAAGCGGAGGCGGGG
GGAGGAGGAGGAAGGGTGTAA
back to top

protein sequence of NO10G00330.1

>NO10G00330.1-protein ID=NO10G00330.1-protein|Name=NO10G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1000bp
MRGLARAPSLSTPSATPTASIITTPRLRLKQPQGLSLLLLSVLLLLFVAS
EAFVFLPPPSSRLAIPPRLQQCPSTLLGPMERYTSGKHRGSGGSGGSGGN
SSPLRFKKKDQNDHDSDEEGGEIDGLPSSSTSSPLRGKGANNGNYKTLPV
AVDDDGGADGLDVLISSSNPVAGIAKNNSSSSSSSSTARLRHGPSSVPPS
LASSPSSLKDVDLISPVNERGLSLEGGGKEEDAAGGGGGGGGGGNGGLKR
FFKANPKAPSSSGRGGKYYFQDDTVQKQLRLFWNMAVPYFKEETAAKVLL
ASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVG
VPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQ
RIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYAT
VGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLE
LKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFA
GKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQ
SANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENV
DLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGRGSGAAALASAAGG
GVSGAVSSGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLS
LRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQ
RPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLS
ILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNK
PKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLVDFHDSKL
FLSGNGYTLEPLPSLLEGREEVRESSSSGNSGMGSKGRKAEAGGGGGRV*
back to top
Synonyms
Publications