NO10G00330.1, NO10G00330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G00330.1
Unique Name	NO10G00330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3000
Alignment location	chr10:109414..116284 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:109414..116284 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G00330.1 vs.
Match: CBJ27203.1 (putative ABC transporter Nda [Ectocarpus siliculosus])

HSP 1 Score: 602.1 bits (1551), Expect = 3.200e-168
Identity = 356/698 (51.00%), Postives = 453/698 (64.90%), Query Frame = 0

Query:  271 QDDTVQKQLRLFWNMAVPYFKEETAAKVLLASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVGVPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQRIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYATVGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLELKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFAGKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQSANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENVDLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGRGSGAAALASAAGGGVSG--AVSSGEGGEDRPSTVDVTIQP--GAALQLEGVSVSTPDYRRMLVQDLSLRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQRPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSS----GHGLSDLAQENEELLSILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNKPKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLVDFHDSKLFLSGNGYTLE 961
            Q   ++ Q+ LF  M+ P+FKE+  A+ LLA+V+ALTL +SGVSV FSYIGRDFWTALS K+  +F  M++ F  AL+ GVPV V YR+ R++L+L+WREW+T R+ ++YY+ + YY LEASKEIDNPDQRIAED+RAFT+ SLEF IT LT+ IDL +FS+IL+ IYPQLFIAI+ YA+VGT VTT +G +LVGLNF QLQ EA FRYSL+RVREN+ESIAFYGG   EL E++RRF  ALDN+  VI  QRNLEFFT  YR+LIQV+PG VVAPL+F GK+ELGVVSQSY                     AF+  +  L+  + + +S +    G+  + G   E+MR + TI                      NV     G   +P     +T++S S +  SVP         G  AL S     + G       +G ++      +T +   GA L +E VSV TP   R+L+  LS RL    R+LIVG SG GKSSLLR MAGLW +GSGKI RP+  EMFFLPQRPYCTLG LRDQ+ YP    S+  +  +G  G +    G        +++ELL +LE V+LG L + MG+G A  GL  + DWS +LSLGEQQRLAF RLLYNKP LAILDE+TSALDL +E +M+ +L  +PG+S VSVGHRPSLV FHD+KL L+  G+ LE
Sbjct:    8 QGADLKTQIGLFVEMSTPFFKEDNGARWLLATVVALTLLNSGVSVAFSYIGRDFWTALSNKDPAQFNIMLQRFLSALIAGVPVTVFYRFEREKLALAWREWMTKRVMEIYYSGQTYYALEASKEIDNPDQRIAEDVRAFTQVSLEFLITVLTSCIDLASFSTILYSIYPQLFIAIIGYASVGTFVTTKLGGKLVGLNFDQLQTEADFRYSLIRVRENAESIAFYGGVQQELNEVQRRFGKALDNFGQVIRAQRNLEFFTTGYRYLIQVLPGFVVAPLFFQGKIELGVVSQSY--------------------GAFNHILGDLSLIVNQFESLSAFSAGIDRL-GEFLERMRGMATIA---------------------NVTDNKRGLLAAPA----STSSSPSSSPSSVP---------GHTALDSPLKDNLLGDDQPEQDDGPKEGEGVGVLTTETAKGARLAVEDVSVVTPTGGRVLMSGLSFRLDDSERMLIVGESGAGKSSLLRAMAGLWTTGSGKIVRPTKEEMFFLPQRPYCTLGPLRDQITYPS---SHGGAEAAGEDGDAEAVEGTTEGGSVADDDELLDLLEKVDLGRLAVMMGSGDAHAGLGAVRDWSDMLSLGEQQRLAFARLLYNKPTLAILDESTSALDLANEERMFALLDTLPGLSVVSVGHRPSLVPFHDTKLTLASKGFKLE 647

The following BLAST results are available for this feature:

BLAST of NO10G00330.1 vs.

BLAST of NO10G00330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ27203.1	3.200e-168	51.00	putative ABC transporter Nda [Ectocarpus siliculos...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G00330	NO10G00330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G00330.1	NO10G00330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G00330.1.cds1	NO10G00330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds2	NO10G00330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds3	NO10G00330.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds4	NO10G00330.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds5	NO10G00330.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds6	NO10G00330.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds7	NO10G00330.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds8	NO10G00330.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds9	NO10G00330.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds10	NO10G00330.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds11	NO10G00330.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds12	NO10G00330.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds13	NO10G00330.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds14	NO10G00330.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds15	NO10G00330.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds16	NO10G00330.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds17	NO10G00330.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds18	NO10G00330.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds19	NO10G00330.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds20	NO10G00330.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds21	NO10G00330.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00330.1.cds22	NO10G00330.1.cds22	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:109414..116284-
coding sequence from alignment at chr10:109414..116284-

mRNA sequence

>NO10G00330.1 ID=NO10G00330.1|Name=NO10G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=3000bp
ATGCGCGGACTTGCGAGGGCTCCCTCTTTATCCACACCCAGTGCTACTCC
CACCGCCTCTATTATCACCACACCCCGACTGCGTCTCAAGCAGCCCCAAG
GTCTTTCCCTCCTCCTCCTTTCCGTCCTTCTCCTCCTCTTTGTCGCCAGC
GAAGCATTCGTCTTCCTCCCTCCGCCGTCAAGTCGCCTCGCAATCCCTCC
CAGACTGCAGCAGTGTCCCTCGACCCTTCTAGGACCAATGGAACGCTACA
CATCGGGCAAGCATCGGGGCAGCGGTGGCTCCGGTGGCTCAGGCGGCAAC
AGCAGCCCCCTCCGTTTTAAAAAGAAGGATCAGAACGACCACGATAGCGA
CGAAGAAGGTGGCGAAATTGATGGCTTACCCTCCTCCTCCACCTCCTCCC
CTCTGCGTGGAAAAGGCGCGAATAATGGGAATTACAAGACCCTGCCTGTC
GCTGTGGATGACGATGGTGGCGCCGACGGCCTGGATGTCCTCATCTCCTC
TTCTAACCCTGTTGCAGGTATAGCCAAGAACAACAGCAGCAGCAGCAGTA
GCAGCAGCACCGCCCGCCTCCGGCATGGTCCTTCCTCTGTCCCTCCCTCC
CTCGCTTCCTCCCCCTCCTCCCTTAAAGACGTCGATCTGATCTCGCCCGT
TAACGAACGCGGCTTGTCGTTGGAAGGAGGAGGAAAAGAGGAAGATGCTG
CAGGAGGAGGAGGAGGAGGAGGGGGGGGCGGTAACGGCGGCCTGAAACGG
TTTTTCAAAGCCAACCCGAAGGCGCCCTCCTCTTCAGGCCGTGGCGGGAA
GTATTACTTCCAGGATGACACTGTACAAAAGCAGCTTCGATTGTTCTGGA
ACATGGCCGTGCCGTACTTCAAGGAGGAAACAGCTGCCAAGGTTTTACTG
GCTTCTGTGATTGCCTTAACCCTGACCTCAAGCGGCGTGTCGGTATGGTT
CTCGTACATAGGCCGCGATTTCTGGACGGCTTTATCCACCAAGAACGAGC
CGGAATTCTACCGGATGATGCGCACCTTTTTCGGGGCCCTGGTCGTGGGC
GTGCCGGTGAACGTCATGTACAGGTACTACCGGCAGAGGCTGTCGCTGTC
CTGGCGGGAGTGGCTCACGGGCCGTATCACGGACCTCTACTACGCGAATC
GTGTCTACTACACCCTCGAGGCCTCCAAAGAGATCGACAATCCCGACCAG
CGGATCGCCGAGGACATTAGGGCCTTCACCAAGGACTCCCTCGAATTCTT
CATCACGGCTCTCACCGCCGTTATTGACCTTGTGGCCTTCTCTTCCATCC
TCTTCCGGATCTACCCCCAGCTCTTCATTGCCATCCTCGCCTATGCCACC
GTTGGTACTCTCGTCACAACCACCGTCGGTCGCCGTCTCGTCGGACTGAA
CTTTTTGCAGCTGCAGCGCGAGGCCTTCTTCCGGTACTCCCTCATGCGCG
TGCGGGAGAACAGCGAGTCCATTGCGTTCTACGGAGGCGAAATGCTGGAG
CTGAAGGAGATAAGGCGTCGATTCACGGCGGCCTTGGACAACTATCGTGA
CGTCATCGCCACTCAGAGGAACCTCGAGTTCTTCACGGTCAGCTATCGTT
TCCTCATTCAAGTCATTCCGGGACTGGTCGTCGCTCCTCTCTACTTCGCT
GGCAAGGTGGAGTTGGGCGTGGTTTCCCAATCCTATTCCGCCTTCAATCA
CATCCTCTCCGACCTCTCCCTCATTGTCAATCAATTCGAAGCCCTCTCCG
CGTTCTCCGCCGGTATTGACCGCCTCGCTGAATTCCTTGAGAAGATCCAG
TCGGCGAACCGCGGTCGTATGGGCCTATCCTCCGTCAAGGGCACCTCGAA
AGAGCAGATGCGGGACCTGAGGACTATCCTCTCTCAAGCCTTCATCGACG
AGCTGCAGGCAGGGCAGCGACGGGCGGCAGGAGAGGGCGGGGAGAACGTC
GATTTGATGGGCGGCGGTCGTTCCGAGAGCCCCCTCCCTCCCACCTTCAC
CACCACCGCCTCTTTGTCCATCACGGGCGAGTCCGTCCCTCTGGTCCGAG
GCAGCGGCCGAGGAAGCGGCGCAGCAGCGCTTGCCTCGGCAGCGGGAGGA
GGGGTGAGCGGTGCCGTGAGTAGCGGGGAGGGAGGAGAGGACAGACCCAG
CACGGTGGACGTGACGATCCAGCCGGGCGCGGCGTTGCAGCTGGAAGGCG
TTTCCGTCTCGACTCCCGACTATCGACGCATGCTGGTCCAGGACCTCTCC
CTCCGCCTCCCCCCCGGAGGCCGCCTCTTGATCGTGGGAAACAGCGGCAC
GGGCAAATCATCCCTCTTGCGCGTTATGGCGGGGCTGTGGGACTCGGGAA
GCGGAAAGATCACGCGGCCTTCCACCGCCGAAATGTTCTTCTTGCCTCAG
CGGCCCTACTGCACCCTCGGCACGCTCCGAGACCAGCTCCACTACCCGAA
GAAGCCTCCCTCCAACTCCTCCTCCCCCACCTCCGGTATCATCGGCAGTA
GCGGTCACGGCCTGTCAGATCTGGCACAGGAGAACGAGGAACTGCTTTCC
ATTCTCGAGGCTGTCAATCTGGGGGATCTGCCTCTTCGCATGGGTAACGG
TTCAGCCGTCGACGGTCTGGACGTTATGACGGACTGGAGCGGCATCCTTT
CGTTGGGGGAACAGCAACGCCTGGCCTTTGGGCGACTGCTGTACAACAAG
CCCAAGCTCGCTATCCTCGACGAGGCGACGTCCGCGCTCGATCTTAACTC
TGAGCGTAAAATGTACGAGGTTCTTCAGGCCATTCCCGGCATCAGCTATG
TCTCAGTGGGCCACCGCCCCTCTCTCGTCGACTTCCACGACAGCAAGCTC
TTCCTCTCCGGTAACGGCTACACTCTTGAGCCATTGCCTTCCTTGTTGGA
AGGGAGGGAGGAAGTGAGGGAGAGCAGTAGCAGCGGCAACAGTGGCATGG
GCAGTAAAGGGAGAAAAGCGGAGGCGGGGGGAGGAGGAGGAAGGGTGTAA

protein sequence of NO10G00330.1

>NO10G00330.1-protein ID=NO10G00330.1-protein|Name=NO10G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1000bp
MRGLARAPSLSTPSATPTASIITTPRLRLKQPQGLSLLLLSVLLLLFVAS
EAFVFLPPPSSRLAIPPRLQQCPSTLLGPMERYTSGKHRGSGGSGGSGGN
SSPLRFKKKDQNDHDSDEEGGEIDGLPSSSTSSPLRGKGANNGNYKTLPV
AVDDDGGADGLDVLISSSNPVAGIAKNNSSSSSSSSTARLRHGPSSVPPS
LASSPSSLKDVDLISPVNERGLSLEGGGKEEDAAGGGGGGGGGGNGGLKR
FFKANPKAPSSSGRGGKYYFQDDTVQKQLRLFWNMAVPYFKEETAAKVLL
ASVIALTLTSSGVSVWFSYIGRDFWTALSTKNEPEFYRMMRTFFGALVVG
VPVNVMYRYYRQRLSLSWREWLTGRITDLYYANRVYYTLEASKEIDNPDQ
RIAEDIRAFTKDSLEFFITALTAVIDLVAFSSILFRIYPQLFIAILAYAT
VGTLVTTTVGRRLVGLNFLQLQREAFFRYSLMRVRENSESIAFYGGEMLE
LKEIRRRFTAALDNYRDVIATQRNLEFFTVSYRFLIQVIPGLVVAPLYFA
GKVELGVVSQSYSAFNHILSDLSLIVNQFEALSAFSAGIDRLAEFLEKIQ
SANRGRMGLSSVKGTSKEQMRDLRTILSQAFIDELQAGQRRAAGEGGENV
DLMGGGRSESPLPPTFTTTASLSITGESVPLVRGSGRGSGAAALASAAGG
GVSGAVSSGEGGEDRPSTVDVTIQPGAALQLEGVSVSTPDYRRMLVQDLS
LRLPPGGRLLIVGNSGTGKSSLLRVMAGLWDSGSGKITRPSTAEMFFLPQ
RPYCTLGTLRDQLHYPKKPPSNSSSPTSGIIGSSGHGLSDLAQENEELLS
ILEAVNLGDLPLRMGNGSAVDGLDVMTDWSGILSLGEQQRLAFGRLLYNK
PKLAILDEATSALDLNSERKMYEVLQAIPGISYVSVGHRPSLVDFHDSKL
FLSGNGYTLEPLPSLLEGREEVRESSSSGNSGMGSKGRKAEAGGGGGRV*

mRNA from alignment at chr10:109414..116284-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G00330.1 ID=NO10G00330.1|Name=NO10G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=6871bp|location=Sequence derived from alignment at chr10:109414..116284- (Nannochloropsis oceanica)
ATGCGCGGACTTGCGAGGGCTCCCTCTTTATCCACACCCAGTGCTACTCC
CACCGCCTCTATTATCACCACACCCCGACTGCGTCTCAAGCAGCCCCAAG
GTCTTTCCCTCCTCCTCCTTTCCGTCCTTCTCCTCCTCTTTGTCGCCAGC
GAAGCATTCGTCTTCCTCCCTCCGCCGTCAAGTCGCCTCGCAATCCCTCC
CAGACTGCAGCAGTGTCCCTCGACCCTTCTAGGTGAGTGATGACGACAGG
GGCCATAAAGATGACAACCGCGGCTTTTAATGCTTCCCCTCTCCCCCCTT
TCTCGCCAATTTCTTCATATATATACGTTGATACATGTATTTATGTGTGG
GCACGCGTTGTTCAAACCTCGGGACTCGCCTCACTGCGGGCATGACCCTT
GCCCGCACACTCTCTTCTTCCCGCACTGCCCACGCGGAAATGCGCCCCCT
CTCGCTCGTATCACACTCCTTCCTCTTACCCTCACCATACCTAGGACCAA
TGGAACGCTACACATCGGGCAAGCATCGGGGCAGCGGTGGCTCCGGTGGC
TCAGGCGGCAACAGCAGCCCCCTCCGTTTTAAAAAGAAGGATCAGAACGA
CCACGATAGGTGCGTGCCTTGGTATCCTGCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCTCTCCCTCCCTCCCTCTTC
TTTATTCCCCCCTCAGACTTGACAATATCCTAATCCTTTGTATCCTCTCC
CACTCATTTGGCAAGAAGACCGTTTCCCTTTTCTGTCTGTTACTACCACC
CCTACCACGCCTTCCTCCTTCCCTCCTTCCCTCGTCCCCTACCTACCTAC
CTAACAGCGACGAAGAAGGTGGCGAAATTGATGGCTTACCCTCCTCCTCC
ACCTCCTCCCCTCTGCGTGGAAAAGGCGCGAATAATGGGAATTACAAGAC
CCTGCCTGTCGCTGTGGATGACGTAGGGAGGGAGGGAGAGAGGGAGGGAG
GGAGGGAATGATTGGCTTGTCAAATACGCTCACAATCTACACCTATATAT
TGAAAAAGTCACAGGATTCCTCTTTTCCCCTATCTATTCTTCAGGATGGT
GGCGCCGACGGCCTGGATGTCCTCATCTCCTCTTCTAACCCTGTTGCAGG
TATAGCCAAGAACAACAGCAGCAGCAGCAGTAGCAGCAGCACCGCCCGCC
TCCGGCATGGTCCTTCCTCTGTCCCTCCCTCCCTCGCTTCCTCCCCCTCC
TCCCTTAAAGACGTCGATCTGATCTCGCCCGTTAACGAACGCGGCTTGTC
GTTGGAAGGAGGAGGAAAAGAGGAAGATGCTGCAGGAGGAGGAGGAGGAG
GAGGGGGGGGCGGTAACGGCGGCCTGAAACGGTTTTTCAAAGCCAACCCG
AAGGCGCCCTCCTCTTCAGGTCTGAGTGGATGCCCCCACATATAAATGAC
GACGACTGAAGGGGGGGGGAAGGGAGGGAGGAAGAGAAGGGCATGTGTAT
GTGACTGTGTGAATTTTTTGCACGCATTGAGGAAATCACCAAAGACCGAC
GGGGTGGTCTCTCACCACCGCCCTTCCCTCCCTCCTTCTCTCCCTCCCTC
CCTTCCTAGGCCGTGGCGGGAAGTATTACTTCCAGGATGACACTGTACAA
AAGCAGCTTCGATTGTTCTGGAACATGGCCGTGCCGTACTTCAAGGTAGG
GAGGGAGGGAGAGAAGGAGGGAGGAAGAAGGGGAGGGAGGGAGGGAGGGA
AGAAGGGCGGCCCATAGTGAGATGTCATGGGCCTGTAAGGCAAGGATTCT
AAAGTCGCCCTCCCTCCCTTCCTCCCTCTCTCCCTCCCTCCTCCCTCCTC
CCTCCTCCTTTCCCCCTCCCTCCCTCCCTCCCCCCTCCCTCCCCCTTCCA
TTACCTCACAGGAGGAAACAGCTGCCAAGGTTTTACTGGCTTCTGTGATT
GCCTTAACCCTGACCTCAAGCGGCGTGTCGGTATGGTTCTCGTACATAGG
CCGCGATTTCTGGACGGCTTTATCCACCAAGAACGAGCCGGAGTAAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGGAGAAACGAGGAGGAA
GGGTTGGAAATGAGAAGAAAGGAGGGGAGGAGGGAGGGTGGGAGGAAGGG
GGGAAGGGAGAAATTGTGTTTCCTGTTTCTTTCACATGCCTGCCTGCCGA
GGAGCTCACCTGTCCTCCCTCCCTCCCTCCCTAACCCCCTCCCTTCCTCC
CTCCCTCCCTCCCTCAGATTCTACCGGATGATGCGCACCTTTTTCGGGGC
CCTGGTCGTGGGCGTGCCGGTGAACGTCATGTACAGGTACTACCGGCAGA
GGCTGTCGCTGTCCTGGCGGGAGTGGCTCACGGGCCGTATCACGGACGTA
AGGAGTGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGAATAAGGTTCAGATTTCGGGGATGCGTTTCCCCTGGGAAGGATGGTG
GGAGGGAGGGAGGAGGGTGAGAGGGTGAGGCGGCCGGGGAGGGCTCTTGC
GTTCCTTCGCGCACTCCCTCCCTCCCTCTCTCCCTTCCTCACCGAGCCCT
ACTACTATACCTTCGAAGGGAGCACAAGAAACCGACATTCTCCCTCCCCC
CTCCCTCCCCCCCTTTCAGCTCTACTACGCGAATCGTGTCTACTACACCC
TCGAGGCCTCCAAAGAGATCGACAATCCCGACCAGCGGATCGCCGAGGAC
ATTAGGGCCTTCACCAAGGCAAGCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTT
CCGCCGTCGTGCCCACCTCTTCCCCTCCTCCCTGTACCCCCCCTTCAACT
TCCTTCCCTCCCTCCCTCCCCCCTCCCTCCTGCTCCCTCATCCCCAAAAC
CCGCCTCCTCTTTCCCTCCTCCTTCAAACTTCCCTCTCACACAGGACTCC
CTCGAATTCTTCATCACGGCTCTCACCGCCGTTATTGACCTTGTGGTAGG
TCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CATGTCTTCCCTCACCCCCACTCTCCAGGCCTTCTCTTCCATCCTCTTCC
GGATCTACCCCCAGCTCTTCATTGCCATCCTCGCCTATGCCACCGTTGGT
ACTCTCGTCACAACCACCGTCGGTCGCCGTCTCGTCGGACTGAACTTTTT
GCAGCTGCAGGTACACGGCTATCCGCCCTCCCTCCCTCCCTCCCTTCCTT
TCTTATTTCGTGTCTCCCTCCCTCCCTCCCTCCCTATTTTGACCCCTCCC
TCCATCCTCCCTCCCCTCCCCTCCTCCCTCTCGTCTTCCGTTTCTTCCTC
TCGCGTGTCCGTAAGAAAACGCGAGTCCGTCATGGCTATCGTCCACTCAC
CTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTTCC
TCAGCGCGAGGCCTTCTTCCGGTACTCCCTCATGCGCGTGCGGGAGAACA
GCGAGTCCATTGCGTTCTACGGAGGCGAAATGCTGGAGCTGAAGGAGATA
AGGCGTCGATTCACGGTAGGGAGGGAGGGAGGGAGGCGAGATGCTGGAGC
TGAAGGAGGTTAAGCGCTGACTCACGCTAGAGGCATGGAAGGGAGGGCGG
GAGGGAGGGAGGGAGGGCGGGAGGGAGGGGGACTTATCCGTGCTAACAAA
ACGATCTTCTGACAGGCGGCCTTGGACAACTATCGTGACGTCATCGCCAC
TCAGAGGAACCTCGGTAAGCCCCTCACTCCCTCCCTCCCTTCCTCCCTCC
CGCCCTGCTGTCCCTCCACCCCACTAACCCTCCCTTTCTCCTTCCCTTCC
TCCTTCCATCCCTCCCCCCTCCCCCCCCTCCATAGAGTTCTTCACGGTCA
GCTATCGTTTCCTCATTCAAGTCATTCCGGGACTGGTCGTCGCTCCTCTC
TACTTCGCTGGCAAGGTGCTCAATCCCCTCCCGCCCTCCCCCCTTCCCCC
CCTCCCTCCCTCCCTCCCTCTCCAGGTGGAGTTGGGCGTGGTTTCCCAAT
CCTATTCCGCCTTCAATCACATCCTCTCCGACCTCTCCCTCTCACCCCCC
TCCCTCCCCCCCTTCCTCCCTCCCTTCTCCCTCCCTCCCTCTCCAGGTGG
AGTTGGGCGTGGTTTCCCAATCCTATTCCGCCTTCAATCACATCCTCTCC
GACCTCTCCCTCATTGTCAATCAATTCGAAGCCCTCTCCGCGTTCTCCGC
CGGTATTGACCGCCTCGCTGAATTCCTTGAGAAGATCCAGGTAAGTCATT
CCCTCCCTCCCTCCCACCCTCCCTCCCACCCTTCCTCCTTCCCTTCCTCC
CTTCCTCCTTCCTTCCCTTCTTTCCCTCCCCCAAAAATCAACATACATCA
TTCCTCTCCCTCCCCCCCTCCCCCCTTCCCCTCCTCATTCCAGTCGGCGA
ACCGCGGTCGTATGGGCCTATCCTCCGTCAAGGGCACCTCGAAAGAGCAG
ATGCGGGACCTGAGGACTATCCTCTCTCAAGCCTTCATCGACGAGCTGCA
GGCAGGGCAGCGACGGGCGGCAGGAGAGGGCGGGGAGAACGTCGATTTGA
TGGGTAAGGACGGAGGGAGAGAGGGAGAGAGGGAGGAAATGATCGACCAC
CATTGATGCCTATGCCTGTCATCATACCGTCCCTCCCTCCCTCCCTCCCT
CCCTCTCTCCCTCCCTCTATTCCCTCAGGCGGCGGTCGTTCCGAGAGCCC
CCTCCCTCCCACCTTCACCACCACCGCCTCTTTGTCCATCACGGGCGAGT
CCGTCCCTCTGGTCCGAGGCAGCGGCCGAGGAAGCGGCGCAGCAGCGCTT
GCCTCGGCAGCGGGAGGAGGGGTGAGCGGTGCCGTGAGTAGCGGGGAGGG
AGGAGAGGACAGGTGCGTTGTGGGGAGGGAGGGAGGGAGGGAGGGAGTAG
CGGGAGGGATGATCCCCTGGTGTGGTCAATCGTGGTTTCATTTCGTTCTC
CCCTTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGACCCAGCACGGT
GGACGTGACGATCCAGCCGGGCGCGGCGTTGCAGCTGGAAGGCGTTTCCG
TCTCGACTCCCGACTATCGACGCATGCTGGTAGAGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGTTGTTGGGAAGATGCATATGCGATTTCTGGTAGG
CTTATTACCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCTCCCTCCCTC
CCTCCCTTCCCTTCTTCAGGTCCAGGACCTCTCCCTCCGCCTCCCCCCCG
GAGGCCGCCTCTTGATCGTGGGAAACAGCGGCACGGGCAAATCATCCCTC
TTGCGCGTTATGGCGGGGCTGTGGGACTCGGGAAGCGGAAAGATCACGCG
GCCTTCCACCGCCGAAATGTTCTTCTTGCCTCAGGTACGCGCCTCCGCTC
CGCCATCCTCCCCCCTCCTTCTCCCTCTTGTACTTGTCAAACCTCCTGCT
TTGTTGATACGCCTTGGACGTCCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACTTATCAAACCTCTGT
CATCGATACCTCCTACTTTTCAGGCTTACCTCTTATACCGCACCCTCCTT
CCCTCCCTCCCTTCCACTCTCCCTCCCTCCCTCCCAGCGGCCCTACTGCA
CCCTCGGCACGCTCCGAGACCAGCTCCACTACCCGAAGAAGCCTCCCTCC
AACTCCTCCTCCCCCACCTCCGGTATCATCGGCAGTAGCGGTCACGGCCT
GTCAGATCTGGCACAGGAGAACGAGGAACTGCTTTCCATTCTCGAGGCTG
TCAATCTGGGGGATCTGCCTCTTCGGTATGTGCGCACCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCTTCCATCCTGTACGAGTTTCCCCTCGTGCTGTTG
TGTTGATCTCGCTCGCTTATCCTCCTTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCTTCTTTCCCGGAACAGCATGGGTAACGGTTCAGCCGTCG
ACGGTCTGGACGTTATGACGGACTGGAGCGGCATCCTTTCGTTGGGGGAA
CAGCAACGCCTGGCCTTTGGGCGACTGCTGTACAACAAGTAGGAGAAACG
GAGGGAGGGAGAGGGAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGAC
AAGACGATGTATTCAGAGGGAGAAGATTCAATCGTCAAGATAGGCCAAAT
CGATTCAGCCTTTCCTGCTTCTTCATTCTTGCTCATCTCACCCTTTTTAT
CCTCCCTCCCTCCCCCGTAGGCCCAAGCTCGCTATCCTCGACGAGGCGAC
GTCCGCGCTCGATCTTAACTCTGAGCGTAAAATGTACGAGGTTCTTCAGG
CCATTCCCGGCATCAGCTATGTCTCAGGTATGCCCTTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCTTCCACAGGCCACC
CTCTATTTTGTTGTCCGTCGTCATTCGTACAGTTATCGTCACGTTAACTC
ACCCGTCCCTGCTTCCCTCCTTCCTTCCCTGCTTCCCTCCCTTCCTTTCT
CCTTCCTTCCCTTCTTTCCTCTTGCAGTGGGCCACCGCCCCTCTCTCGTC
GACTTCCACGACAGCAAGCTCTTCCTCTCCGGTAACGGCTACACTCTTGA
GCCATTGCCTTCCTTGTTGGAAGGGAGGGAGGAAGTGAGGGAGAGCAGTA
GCAGCGGCAACAGTGGCATGGGCAGTAAAGGGAGAAAAGCGGAGGCGGGG
GGAGGAGGAGGAAGGGTGTAA

Coding sequence (CDS) from alignment at chr10:109414..116284-

>NO10G00330.1 ID=NO10G00330.1|Name=NO10G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=3000bp|location=Sequence derived from alignment at chr10:109414..116284- (Nannochloropsis oceanica)
ATGCGCGGACTTGCGAGGGCTCCCTCTTTATCCACACCCAGTGCTACTCC
CACCGCCTCTATTATCACCACACCCCGACTGCGTCTCAAGCAGCCCCAAG
GTCTTTCCCTCCTCCTCCTTTCCGTCCTTCTCCTCCTCTTTGTCGCCAGC
GAAGCATTCGTCTTCCTCCCTCCGCCGTCAAGTCGCCTCGCAATCCCTCC
CAGACTGCAGCAGTGTCCCTCGACCCTTCTAGGACCAATGGAACGCTACA
CATCGGGCAAGCATCGGGGCAGCGGTGGCTCCGGTGGCTCAGGCGGCAAC
AGCAGCCCCCTCCGTTTTAAAAAGAAGGATCAGAACGACCACGATAGCGA
CGAAGAAGGTGGCGAAATTGATGGCTTACCCTCCTCCTCCACCTCCTCCC
CTCTGCGTGGAAAAGGCGCGAATAATGGGAATTACAAGACCCTGCCTGTC
GCTGTGGATGACGATGGTGGCGCCGACGGCCTGGATGTCCTCATCTCCTC
TTCTAACCCTGTTGCAGGTATAGCCAAGAACAACAGCAGCAGCAGCAGTA
GCAGCAGCACCGCCCGCCTCCGGCATGGTCCTTCCTCTGTCCCTCCCTCC
CTCGCTTCCTCCCCCTCCTCCCTTAAAGACGTCGATCTGATCTCGCCCGT
TAACGAACGCGGCTTGTCGTTGGAAGGAGGAGGAAAAGAGGAAGATGCTG
CAGGAGGAGGAGGAGGAGGAGGGGGGGGCGGTAACGGCGGCCTGAAACGG
TTTTTCAAAGCCAACCCGAAGGCGCCCTCCTCTTCAGGCCGTGGCGGGAA
GTATTACTTCCAGGATGACACTGTACAAAAGCAGCTTCGATTGTTCTGGA
ACATGGCCGTGCCGTACTTCAAGGAGGAAACAGCTGCCAAGGTTTTACTG
GCTTCTGTGATTGCCTTAACCCTGACCTCAAGCGGCGTGTCGGTATGGTT
CTCGTACATAGGCCGCGATTTCTGGACGGCTTTATCCACCAAGAACGAGC
CGGAATTCTACCGGATGATGCGCACCTTTTTCGGGGCCCTGGTCGTGGGC
GTGCCGGTGAACGTCATGTACAGGTACTACCGGCAGAGGCTGTCGCTGTC
CTGGCGGGAGTGGCTCACGGGCCGTATCACGGACCTCTACTACGCGAATC
GTGTCTACTACACCCTCGAGGCCTCCAAAGAGATCGACAATCCCGACCAG
CGGATCGCCGAGGACATTAGGGCCTTCACCAAGGACTCCCTCGAATTCTT
CATCACGGCTCTCACCGCCGTTATTGACCTTGTGGCCTTCTCTTCCATCC
TCTTCCGGATCTACCCCCAGCTCTTCATTGCCATCCTCGCCTATGCCACC
GTTGGTACTCTCGTCACAACCACCGTCGGTCGCCGTCTCGTCGGACTGAA
CTTTTTGCAGCTGCAGCGCGAGGCCTTCTTCCGGTACTCCCTCATGCGCG
TGCGGGAGAACAGCGAGTCCATTGCGTTCTACGGAGGCGAAATGCTGGAG
CTGAAGGAGATAAGGCGTCGATTCACGGCGGCCTTGGACAACTATCGTGA
CGTCATCGCCACTCAGAGGAACCTCGAGTTCTTCACGGTCAGCTATCGTT
TCCTCATTCAAGTCATTCCGGGACTGGTCGTCGCTCCTCTCTACTTCGCT
GGCAAGGTGGAGTTGGGCGTGGTTTCCCAATCCTATTCCGCCTTCAATCA
CATCCTCTCCGACCTCTCCCTCATTGTCAATCAATTCGAAGCCCTCTCCG
CGTTCTCCGCCGGTATTGACCGCCTCGCTGAATTCCTTGAGAAGATCCAG
TCGGCGAACCGCGGTCGTATGGGCCTATCCTCCGTCAAGGGCACCTCGAA
AGAGCAGATGCGGGACCTGAGGACTATCCTCTCTCAAGCCTTCATCGACG
AGCTGCAGGCAGGGCAGCGACGGGCGGCAGGAGAGGGCGGGGAGAACGTC
GATTTGATGGGCGGCGGTCGTTCCGAGAGCCCCCTCCCTCCCACCTTCAC
CACCACCGCCTCTTTGTCCATCACGGGCGAGTCCGTCCCTCTGGTCCGAG
GCAGCGGCCGAGGAAGCGGCGCAGCAGCGCTTGCCTCGGCAGCGGGAGGA
GGGGTGAGCGGTGCCGTGAGTAGCGGGGAGGGAGGAGAGGACAGACCCAG
CACGGTGGACGTGACGATCCAGCCGGGCGCGGCGTTGCAGCTGGAAGGCG
TTTCCGTCTCGACTCCCGACTATCGACGCATGCTGGTCCAGGACCTCTCC
CTCCGCCTCCCCCCCGGAGGCCGCCTCTTGATCGTGGGAAACAGCGGCAC
GGGCAAATCATCCCTCTTGCGCGTTATGGCGGGGCTGTGGGACTCGGGAA
GCGGAAAGATCACGCGGCCTTCCACCGCCGAAATGTTCTTCTTGCCTCAG
CGGCCCTACTGCACCCTCGGCACGCTCCGAGACCAGCTCCACTACCCGAA
GAAGCCTCCCTCCAACTCCTCCTCCCCCACCTCCGGTATCATCGGCAGTA
GCGGTCACGGCCTGTCAGATCTGGCACAGGAGAACGAGGAACTGCTTTCC
ATTCTCGAGGCTGTCAATCTGGGGGATCTGCCTCTTCGCATGGGTAACGG
TTCAGCCGTCGACGGTCTGGACGTTATGACGGACTGGAGCGGCATCCTTT
CGTTGGGGGAACAGCAACGCCTGGCCTTTGGGCGACTGCTGTACAACAAG
CCCAAGCTCGCTATCCTCGACGAGGCGACGTCCGCGCTCGATCTTAACTC
TGAGCGTAAAATGTACGAGGTTCTTCAGGCCATTCCCGGCATCAGCTATG
TCTCAGTGGGCCACCGCCCCTCTCTCGTCGACTTCCACGACAGCAAGCTC
TTCCTCTCCGGTAACGGCTACACTCTTGAGCCATTGCCTTCCTTGTTGGA
AGGGAGGGAGGAAGTGAGGGAGAGCAGTAGCAGCGGCAACAGTGGCATGG
GCAGTAAAGGGAGAAAAGCGGAGGCGGGGGGAGGAGGAGGAAGGGTGTAA

Synonyms

Publications