NO09G04250, NO09G04250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO09G04250 vs. NCBI_GenBank
Match: XP_005852461.1 (hypothetical protein NGA_2060000, partial [Nannochloropsis gaditana CCMP526] >EKU23369.1 hypothetical protein NGA_2060000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 216.5 bits (550), Expect = 1.200e-52 Identity = 119/266 (44.74%), Postives = 167/266 (62.78%), Query Frame = 0 Query: 58 RLAMCFFGQVKNIADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEHNITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLD-ADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWE-SDKEPNYYTAVIYTRPDLLFHTRLPL-----VASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEASLWSEKFLHKVMIQMYGFAYTRLE--NFFFSRVRA 315 R+A+CFFGQVKN+ + F+++V+ PL+ Y+P IDVYLHTYNI F NPRN E N+T+ V SL + + L ++ PG + ++ ++IT+ ADR FRPL FYLS GDPW NEG+SM LRQLYSL+ VT+ WE S + Y AV+Y RPDLLF + LP+ V E ++ IL P ++++ FD + +NDRFA G P+VM +YG+R I+ + + P L +E +L VM + R E +F F R+RA Sbjct: 26 RVALCFFGQVKNVNHVQLTSFIDNVMRPLLEYFPSIDVYLHTYNIVSFHNPRNLEKNVTLHVADSLNLIFSELREL--PG-VKIRNISITQDAKAADRSFRPLNFYLSHGDPWRNEGLSMFYFLRQLYSLETVTRLWEKSPSTGDRYQAVVYVRPDLLFESPLPVADTLDVIDEEHSKRILWPRTVFSPNFD--VFGGMNDRFALGTPDVMSVYGYRKNDIDRFMEENPTKHLHAESYLAWVMKD----SLIRCETLDFSFKRIRA 282
BLAST of NO09G04250 vs. NCBI_GenBank
Match: CUG84304.1 (transmembrane protein, putative [Bodo saltans]) HSP 1 Score: 109.8 bits (273), Expect = 1.600e-20 Identity = 81/278 (29.14%), Postives = 128/278 (46.04%), Query Frame = 0 Query: 58 RLAMCFFGQVKNIADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEHNITIDVVSSLEHLVTTLSQMGPPGRISLKGLN--ITEPLDADRHFRPLEFYLSRGDPWDNE-GISMPNLLRQLYSLDQVTQQW-----ESDKEPN----------YYTAVIYTRPDLLFHTRLPLVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGT 318 ++A+ FFG VK + + F V PL++ +DV+LHT+ FSNPRNGE + +I+ S+ L + + N ++E +A F P E Y G+PW + G+S LRQ YSL + T+ W S ++ N Y+ V+Y RPDL T + RH + A P+ + G LNDR AFG P M +YG R ++ + D + S +E +L + + + + + R+R+DG+ Sbjct: 116 QIAVVFFGLVKKLVAPQLAAFRNFVAAPLLS-AGDVDVFLHTFEESNFSNPRNGEKSQSINQSKSIVLLQNAF--------VGARRFNVAVSEAKEAHDFFGPTERYTRNGNPWKRDGGLSSHYFLRQQYSLIRATEMWTGTNYRSPQQQNNEMQILLPNTNYSCVLYIRPDLAAETPIAAETIRAMCRHDNDGHRELAVPYIEWNG--LNDRTAFGTPEAMLLYGLRGLRLQTFIDGGGQIS--AEPYLFRYLCE--NKVAVHIAPWMVRRIRSDGS 378
BLAST of NO09G04250 vs. NCBI_GenBank
Match: CUG92680.1 (membrane-associated protein, putative [Bodo saltans]) HSP 1 Score: 106.7 bits (265), Expect = 1.400e-19 Identity = 83/274 (30.29%), Postives = 131/274 (47.81%), Query Frame = 0 Query: 59 LAMCFFGQVKNIADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEHNITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEG-ISMPNLLRQLYSLDQVTQQW----------ESDKEPNY---YTAVIYTRPDLLFHTRLPLVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFD--RYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADG 317 +A+ FFG VK+++ + I ++++ PL ++++LHTY E FSNPRN E + ID +++ + LS P R+ I + L+A R+F P +YL G W +S LRQ YSL + T W + + P+ Y+ V+Y RPDLLF + LP A R + PF + G NDR AFG P M +YG R + + + + P A + +FL + + ++ +T R+RA+G Sbjct: 72 IALVFFGLVKSVSSEQIEALQDNIIAPL-NEIGNVEIFLHTYREESFSNPRNKESS-AIDQRGAIKMIRKALSPR--PLRV-----QIDDSLEAHRYFGPTLWYLRHGGAWKQHSLLSTHFYLRQQYSLLRATDMWTGVNYSSLQDSAARLPSIASRYSCVVYVRPDLLFDSPLPRDALRTVCRLPNEGHRDVVIPFVEFGG--WNDRSAFGTPEGMALYGLRGMRLRAFTEAKQIPHAESYLARFLCENNVTVHLAPWTA------RRIRANG 328
BLAST of NO09G04250 vs. NCBI_GenBank
Match: WP_037007034.1 (hypothetical protein [Pseudomonas nitroreducens]) HSP 1 Score: 79.7 bits (195), Expect = 1.800e-11 Identity = 81/266 (30.45%), Postives = 115/266 (43.23%), Query Frame = 0 Query: 58 RLAMCFFGQVKN--IADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEHNITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWESDKEPNYYTAVIYTRPDLLFHTRLP---LVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGTY 319 ++A+ FFG +N + I+R + VL Q+ + H Y + NPR+GE + E T M GL L DR E RGD W ++ S+ NL+ QL SL QVT + +P++ V+Y RPD+ FH LP +E R++ PN + LNDRFA + R YG R + + D SL SE+ L K +Q YG A + + SRVR DG + Sbjct: 4 KIAVAFFGIPRNSELCFPQIQRNILQVL----PADAQVSCFYHLYRLREVFNPRSGEAGVL------GEENFTPFQDM--------TGLIEEPELCLDRW--NFEAIKQRGDTWKDDFRSIRNLIHQLNSLHQVTSLL-APTDPDF---VVYVRPDIFFHDPLPGYVFAHTERRRRNVYVPNW--------QWWGGLNDRFAICGREIYRAYGCRAEEMLNFCDA-SGRSLHSERLL-KFALQRYG-ARVCMMDTTASRVRIDGQF 234
BLAST of NO09G04250 vs. NCBI_GenBank
Match: WP_065085610.1 (hypothetical protein [Pseudomonas sp. AU12215] >OBY58049.1 hypothetical protein A9513_007310 [Pseudomonas sp. AU12215]) HSP 1 Score: 79.7 bits (195), Expect = 1.800e-11 Identity = 81/266 (30.45%), Postives = 115/266 (43.23%), Query Frame = 0 Query: 58 RLAMCFFGQVKN--IADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEHNITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWESDKEPNYYTAVIYTRPDLLFHTRLP---LVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGTY 319 ++A+ FFG +N + I+R + VL Q+ + H Y + NPR+GE + D T M GL L DR E RGD W ++ S+ NL+ QL SL QVT + +P++ V+Y RPD+ FH LP +E R++ PN + LNDRFA + R YG R + + D SL SE+ L K +Q YG A + + SRVR DG + Sbjct: 4 KIAVAFFGIPRNSELCFPQIQRNILQVL----PADAQVSCFYHLYRLREVFNPRSGEAGVLGD------ENFTPFQDM--------TGLIEEPELCLDRW--NFEAIKQRGDTWKDDFRSIRNLIHQLNSLHQVTSLL-APTDPDF---VVYVRPDIFFHDPLPGYVFAHTERRRRNVYVPNW--------QWWGGLNDRFAICGREIYRAYGCRAEEMLNFCDA-SGRSLHSERLL-KFALQRYG-ARVCMMDTTASRVRIDGQF 234
BLAST of NO09G04250 vs. NCBI_GenBank
Match: SNT34934.1 (hypothetical protein SAMN05216209_4553 [Pseudomonas nitroreducens]) HSP 1 Score: 79.7 bits (195), Expect = 1.800e-11 Identity = 81/266 (30.45%), Postives = 115/266 (43.23%), Query Frame = 0 Query: 58 RLAMCFFGQVKN--IADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEHNITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWESDKEPNYYTAVIYTRPDLLFHTRLP---LVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGTY 319 ++A+ FFG +N + I+R + VL Q+ + H Y + NPR+GE + E T M GL L DR E RGD W ++ S+ NL+ QL SL QVT + +P++ V+Y RPD+ FH LP +E R++ PN + LNDRFA + R YG R + + D SL SE+ L K +Q YG A + + SRVR DG + Sbjct: 2 KIAVAFFGIPRNSELCFPQIQRNILQVL----PADAQVSCFYHLYRLREVFNPRSGEAGVL------GEENFTPFQDM--------TGLIEEPELCLDRW--NFEAIKQRGDTWKDDFRSIRNLIHQLNSLHQVTSLL-APTDPDF---VVYVRPDIFFHDPLPGYVFAHTERRRRNVYVPNW--------QWWGGLNDRFAICGREIYRAYGCRAEEMLNFCDA-SGRSLHSERLL-KFALQRYG-ARVCMMDTTASRVRIDGQF 232
BLAST of NO09G04250 vs. NCBI_GenBank
Match: XP_009038605.1 (hypothetical protein AURANDRAFT_65325 [Aureococcus anophagefferens] >EGB06861.1 hypothetical protein AURANDRAFT_65325 [Aureococcus anophagefferens]) HSP 1 Score: 75.1 bits (183), Expect = 4.500e-10 Identity = 75/266 (28.20%), Postives = 116/266 (43.61%), Query Frame = 0 Query: 58 RLAMCFFGQVKNIADDH--IRRFMEHVLHPLITYYPQIDVYLHTYNIERF--SNPRNGEHN-ITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWES--DKEPNYYTAVIYTRPDLLFHTRLPLVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADG 317 R+A+CF+G + + H IRR H++ PL ++DV+ HT+++E + GE + I + + L+ L ++ + DA + +Y + + G + NL+RQL SL +VT W S +Y AVIY RPDLLF + N + + + + P+ + LNDR A G P +G+R+ Y E L SE FL + +GF LE RVRA G Sbjct: 50 RVALCFYGLNRALRHTHESIRR---HLVAPLRAACARVDVFYHTWSLETLEDTGKAGGEREAVRIGGAAEMRALLGDL--------VAKSAVTDQAAFDAASN---ASYYKTLDRRYG--GPNFVNLMRQLESLRRVTALWRSMGAHAETHYAAVIYARPDLLF------LDDVNATQALTLRENDFLTPYWHQ-WSGLNDRVAIGRPRAAAAFGNRIELAAGY---ALETFLRSESFLKWAVCDHHGFDLAFLE-ARAQRVRASG 288
BLAST of NO09G04250 vs. NCBI_GenBank
Match: WP_058543047.1 (hypothetical protein [Pseudomonas fluorescens]) HSP 1 Score: 73.6 bits (179), Expect = 1.300e-9 Identity = 80/265 (30.19%), Postives = 117/265 (44.15%), Query Frame = 0 Query: 58 RLAMCFFGQVKNIADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEH-NITIDVVSSLEHLVTTLSQMGPPGRISLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWESDKEPNYYTAVIYTRPDLLFHTRLPLVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFDRYPEAS---LWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGTY 319 ++A+ FFG +N ++ E+VL I ++ + H Y IE NPR+GE + D + ++ L P G + E D +R S GD W +E S+ NL+ QL SL+ VT E +P++ V++ RPD +HT LP + L+ A D + LNDRFA + R YG R IE FD + EA+ L SE+ L + Q + T SRVR DG + Sbjct: 3 KVALAFFGIPRN-SEICFPSIQENVL-AQIPAGSEVQCFYHLYKIEEIRNPRSGEQGELKADNYAPFSTMIGRLD--SPEG--------VLERWDFER-------VKSLGDTWGDEHASLRNLIYQLNSLNAVTAMME-PFDPDF---VVFVRPDNFYHTALPAYVFAHPDTRRLN-----AYIPDWQWWGGLNDRFAICGRDAYRAYGKR---IERIFD-FCEATGRQLHSERLLKYALQQAHVKVCTLPTT--ASRVRIDGAF 233
BLAST of NO09G04250 vs. NCBI_GenBank
Match: WP_053177874.1 (MULTISPECIES: hypothetical protein [Pseudomonas] >OOG87221.1 hypothetical protein B0E42_08525 [Pseudomonas sp. A25(2017)]) HSP 1 Score: 73.2 bits (178), Expect = 1.700e-9 Identity = 79/266 (29.70%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 58 RLAMCFFGQVKNIADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEH-NITIDVVSSLEHLVTTLSQMGPPGRI-SLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWESDKEPNYYTAVIYTRPDLLFHTRLP-LVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFD--RYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGTY 319 ++A+ FFG +N + +E + I ++ + H Y I+ NPR+GE ++ D S TT++ GR+ S++G + E D +R + GD W ++ +S+ NL+ QL SL+ VT E +P++ V++ RPD+ FHT LP V + AR + + Y D + LNDRFA + R YG R IE FD L SE+ L + Q + +T SRVR +G + Sbjct: 3 KIALAFFGIPRN--SEVCFPSIEKNVLAQIPAGSEVQCFYHLYKIDEVHNPRSGEQGKLSADNYSPF----TTMT-----GRLDSIEG--VLERWDFER-------VKALGDAWGDQHMSLRNLIYQLNSLNSVTAMME-PFDPDF---VVFVRPDIFFHTTLPSYVFARPEARRL----NAYIP--DWQWWNGLNDRFAICGRDAYRAYGSR---IERIFDFCEVTGRKLHSERLLKFALQQAHIKVFTLPTT--ASRVRINGNF 233
BLAST of NO09G04250 vs. NCBI_GenBank
Match: WP_024617998.1 (hypothetical protein [Pseudomonas fluorescens]) HSP 1 Score: 72.8 bits (177), Expect = 2.200e-9 Identity = 79/266 (29.70%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 58 RLAMCFFGQVKNIADDHIRRFMEHVLHPLITYYPQIDVYLHTYNIERFSNPRNGEH-NITIDVVSSLEHLVTTLSQMGPPGRI-SLKGLNITEPLDADRHFRPLEFYLSRGDPWDNEGISMPNLLRQLYSLDQVTQQWESDKEPNYYTAVIYTRPDLLFHTRLP-LVASENGARHILSPNSIYAAPFDDELGQALNDRFAFGAPNVMRIYGHRMRYIEPYFD--RYPEASLWSEKFLHKVMIQMYGFAYTRLENFFFSRVRADGTY 319 ++A+ FFG +N + +E + I ++ + H Y I+ +NPR+GE + D S TT++ GR+ S++G + E D +R + GD W ++ +S+ NL+ QL SL+ VT E +P++ V++ RPD+ FHT LP V + AR + + Y D + LNDRFA + R YG R IE FD L SE+ L + Q + +T SRVR +G + Sbjct: 3 KIALAFFGIPRN--SEVCFPSIEKNVLAQIPAGSEVQCFYHLYKIDEVNNPRSGEQGKLDADNYSPF----TTMT-----GRLDSIEG--VLERWDFER-------VKAFGDTWGDQHMSLRNLIYQLNSLNSVTAMME-PFDPDF---VVFVRPDIFFHTTLPSYVFARPEARRL----NAYIP--DWQWWNGLNDRFAICGRDAYRAYGSR---IERIFDFCEVTGRKLHSERLLKFALQQAHIKVFTLPTT--ASRVRINGNF 233 The following BLAST results are available for this feature:
BLAST of NO09G04250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G04250 ID=NO09G04250|Name=NO09G04250|organism=Nannochloropsis oceanica|type=gene|length=1853bpback to top protein sequence of NO09G04250.1 >NO09G04250.1-protein ID=NO09G04250.1-protein|Name=NO09G04250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bpback to top Synonyms
Publications
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