NO09G03560, NO09G03560 (gene) Nannochloropsis oceanica

Overview
NameNO09G03560
Unique NameNO09G03560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2414
Alignment locationchr9:1021371..1023784 +

Link to JBrowse

Properties
Property NameValue
DescriptionE3 ubiquitin-protein ligase rnf14
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1021371..1023784 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR031127E3_UB_ligase_RBR
IPR006575RWD-domain
IPR002867Znf_C6HC
IPR001841Znf_RING
Homology
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_016201136.1 (E3 ubiquitin-protein ligase RNF14 [Arachis ipaensis])

HSP 1 Score: 213.4 bits (542), Expect = 2.200e-51
Identity = 148/561 (26.38%), Postives = 227/561 (40.46%), Query Frame = 0
Query:  113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDIS-SEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            ++YLPP+ L  ++P +YP   PP  +    W ++     + ++L  +W E  QG  V++ W++WLQ   +  L  +   +  R                                                               +       +  +   + +  FL+  H C ICF E+PG  FV L C H++C  CL T    +V EG   +  L CP   C   I P +LKH LL  EEYERWE + L + L  M DV  CPRC+TPC+ +  +                    +C +CFF FC  C++  H G  C + + +L        +++        L   Q  R    R    E LS K + ++++ CP+C M++ + EGCNKM+C  CG  +C++C K I  S+ Y HFR+   G+C L+  E +  WQ ++                     + G++   L   RG                            + C  C   N K  +NNH  C AC+ +YC +C     R+ S H+ G K CKQH+
Sbjct:  243 VQYLPPIVLTCLLPKSYPSHQPPLFTVSVQWLESLDILSLCSQLDSIWAE-QQGQEVIYQWVDWLQSSSLSHLGFDKEIILGRN-----------------------------------------------GVNCVGDERVVSGSISLDAAIPFLRGYNKERHNENFLKELHECSICFSEYPGTEFVRLPCQHFFCLKCLQTFTQMHVKEG--TISNLQCPDSKCKVMIPPGLLKH-LLGDEEYERWESMMLERTLASMSDVVYCPRCETPCIEDEDQH------------------AQCSKCFFSFCTLCRERRHVGIACMTLDMKL--------QILQDRQNSSQLKEDQKLR---EREKINEMLSMKEIHRDSKLCPSCSMAINRTEGCNKMKCSNCGAYFCYRCNKLIDPSDPYGHFRD---GSCELFPQEMIENWQERI-----------------NHRQVVGQLQAELFRERG----------------------------LPCPNCRQFNAKVGNNNHMFCWACQSHYCYLCNEIV-RRGSKHY-GPKGCKQHT 673          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: KMZ66483.1 (E3 ubiquitin-protein ligase RNF14 [Zostera marina])

HSP 1 Score: 212.6 bits (540), Expect = 3.700e-51
Identity = 175/666 (26.28%), Postives = 272/666 (40.84%), Query Frame = 0
Query:    9 EQQLLEVESLQAILGSSDHSHSGDGEATE-IPGDASFQVRGDGTVREPFHLRCEVDVALPPNEVIDIVVVADSEEA-CGAYAEAVSPHSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            E +  ++E  Q ++  +D     +  A E I GD    + G G +R    L+ +V++ +P N ++  +  ++      G + E      D+T E   S   +    ++YLPP+TL  + PL+YP   PP  +    W +    +++  +L  +W E + G  V++ W+EWL    +  L  +   + ++                                                                      L++ +   + + AF R  + C IC  E+ G  F  L C H++C  C+ T    +V EG   +  LVCP   CA  I P++LK  LL  + YERWE L L + LD M DV  CPRCQTPC+                         +C +C+F FC  C +  H G  C S EA+L   +A         +  +  A  Q  +   L     E  + K +  N++ CP+C M++ K  GCNKM C  CG  +C++C K I  +GY HFR G    C L++ + +LA++ QM                      H    R+ ++ R                      V+ G    RC  C+  N+K  +NNH  C +C+ +YC  CG    RK S H+ G K CKQHS
Sbjct:   82 EDEGKDIELSQDLVLINDQLQQDEVLALESIYGDNVSVLDGKGGLR---LLQIQVNIDVPENFIVSQLQSSNVWSVDAGNFQE-----EDATREDGNSNEFVYTFNVQYLPPITLTCLFPLSYPSHGPPRFTISAQWLNVLKISKLCHKLDSIWTEQF-GQEVIYQWIEWLHQSSISYLCFD-NGILIKPCDPSVYTDRRAVPGCISPELV----------------------------------------------IPLLMTYNAEKCNEAFRRNQYVCAICLTEYTGIDFRRLPCKHFFCLACMETYCKLHVKEG--TVTKLVCPDAKCAEMIPPELLK-CLLGKQAYERWESLLLKKTLDSMCDVVYCPRCQTPCIEYDENN------------------AQCSKCYFSFCTLCNERRHVGVECMSPEAKLNIFQAR-------QNSNRFTAEDQRRKETNL---INELKNMKEILNNSKQCPSCKMAISKDGGCNKMVCGNCGQFFCYRCNKAI--KGYEHFRSG----CELFDIDDILAYEMQMHQ--------------------HVAPQRLAEFHR-------------------RLYVDNG---RRCPNCSQNNVKVQNNNHIHCFSCQIHYCFSCGLIV-RKKSQHY-GPKGCKQHS 610          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: OWM88266.1 (hypothetical protein CDL15_Pgr003678 [Punica granatum] >PKI46862.1 hypothetical protein CRG98_032673 [Punica granatum])

HSP 1 Score: 212.6 bits (540), Expect = 3.700e-51
Identity = 164/602 (27.24%), Postives = 242/602 (40.20%), Query Frame = 0
Query:   72 IDIVVVADSEEACGAYAEAVSP-HSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRCQ-CGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            I I +  ++E A    A+  SP H DST  +       +   ++YLPP+ L L++P +YP   PP  +    W D    + + + L  +W E   G  V++ W +WLQ   +  L          +E                                                                     I  +   +    FL+  H C ICF E+ G  F+ L C H++C  C+ T ++ +V EG  ++  L CP   C   + P +LK  LL +E YE WE L+L + LD M DV  CPRC+TPC+ +  +                     C +CFF FC  C+D  H G  C + E RL        +++        L  +Q  R  +L     E LS K V ++A+ CP+C +++ + EGCNKM C+ CG  +C++C K+IS  GY HFR+   G C L+  E +L W+  M                     + GEM   L    G                             RC  C   N K  +NNH  C AC+ ++C +C     R+AS H+ G K CKQH+
Sbjct:  203 IQIHIHIETEGAFTITAKLDSPNHVDSTGNNVDDGFSYSFE-VQYLPPIVLTLLLPKSYPSHLPPHFTISAQWLDPVKISHLCSMLDSLWME-QPGQEVIYQWADWLQSSSLSYL-------GFHQEVTLGPYGVSSVSDKRAISRSVSVDVDVPS----------------------------------------IRRYNDEKCQENFLKSLHECCICFSEYAGTDFIRLPCLHFFCGKCIKTYSNLHVKEGTVNM--LKCPEVKCGGMVPPGLLK-QLLDNEAYEHWESLTLQKTLDSMSDVVSCPRCETPCIEDPDQH------------------AVCSKCFFSFCTLCRDRRHVGVECMTPEVRL--------QILQERQNSTQLKENQKLREREL---INELLSLKEVFRDAKQCPSCKIAISRTEGCNKMVCKNCGHYFCYRCNKEIS--GYDHFRD---GECELFPVEQVLNWEDMM----------------RNPRQILGEMQADLFPDHG----------------------------ERCPNCRQYNAKVGNNNHIFCWACQTHFCYLCK-KVVRRASQHY-GPKGCKQHT 672          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_015579960.1 (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF14 [Ricinus communis])

HSP 1 Score: 210.3 bits (534), Expect = 1.900e-50
Identity = 151/563 (26.82%), Postives = 225/563 (39.96%), Query Frame = 0
Query:  113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRL---LEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            I+YLPP+ L  ++P +YP   PP  +    W D+   + + + L  +W E   G  +++ W+EWLQ   +  L    E      V  E                                                                     + ++   +    F    H C IC+ E+ G  F+ L C H++C  C+ T    +V EG   +  L CP   C   + P +LK  LL  EEYERWE L L + LD M DVA CPRC+TPC+ +  +                    +C +CFF FC  C++  H G  C + E RL+ +E             ++L+  ++ +  + R    E LS K + ++A+ CP+C M++ + EGCNKM C  CG  +C++C K I  +GY HFR+    AC L+  E++  W+RQM                     L  E A                                     RC  C   N K  +NNH  C AC+ +YC +C     R+++ HF G K CKQH+
Sbjct:  234 IQYLPPIVLTFLLPKSYPSHLPPYFTISVQWLDSIKISNLCSMLDTIWME-KPGQEIIYQWVEWLQTSSLSHLGADQEITLGPYVHSEDMRAVSGSVSPEVDIPS----------------------------------------------------LRSYNDEKCHENFRLNLHECLICYSEYTGSDFIRLPCQHFFCCTCMKTYCGIHVTEG--TVNKLQCPDAKCGGMVPPGLLK-QLLGDEEYERWESLMLQKTLDSMSDVAYCPRCETPCIEDEDQH------------------AQCSKCFFSFCTLCRERLHVGEVCLTPELRLRVLEER-----------QNLSQLKDKQKLREREMINELLSLKEIHRDAKQCPSCKMAISRTEGCNKMVCNNCGRYFCYRCNKAI--DGYDHFRD----ACELFPREAIEQWERQM---------NARQIVAQVQAELFSEHAH------------------------------------RCPNCGQDNAKVGNNNHIFCWACQNHYCYLCKKIV-RRSAQHF-GPKGCKQHT 658          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_020094867.1 (E3 ubiquitin-protein ligase RNF14 [Ananas comosus])

HSP 1 Score: 209.1 bits (531), Expect = 4.100e-50
Identity = 164/611 (26.84%), Postives = 247/611 (40.43%), Query Frame = 0
Query:   70 EVID-IVVVADSEEACGAYAEAVSPHSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVY---QGGPVVFSWLEWLQYELVDRL-LEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAE---ESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            EV D I V A      G     V+ H+D       ++   T R ++YLPP+ L  ++P +YP   PP  +    W D    A++ + L RM D ++    G  +++ W+ W+Q   +  L  +    + V ++                                                                    L++++   +   AFL   H C ICF ++ G  F+ L C H++C  C+ T +S +V EG   +  L+CP   C   + P +LK  LL  E+YERWE L L + LD M DV  CPRC+T CL +                       +C +CFF FC  C+D  H G  C + EA+L  ++                  S   + E+LRR  E   E LS K   ++A+ CP+C M++ + EGCNKM C  CG  +C++C K I  +GY HFR      C L+  E +  W+ +M                     LH E+                                    +  C  C   N KT +NNH  C AC+ ++CA+C   T R++S+HFG  + CKQH+
Sbjct:  133 EVSDGISVSAKLHSDTGKLTSGVNRHADMAISENTNEFIYTFR-VQYLPPILLTCLLPQSYPSHHPPLFTITAQWLD---KAKI-SSLCRMLDTIWIAQPGQEIIYQWVYWIQNSSLSHLGFDSGVMLGVSDKPEAADRRALSGSASPEFI------------------------------------------------IPLMMSYNDEKRHEAFLNNLHQCDICFSDYAGTDFIKLPCQHFFCWKCMETYSSMHVKEG--TVTKLLCPDTKCGGLVPPSLLKR-LLGDEDYERWESLVLQKTLDSMSDVVYCPRCETACLEDADNH------------------AQCSKCFFSFCSLCRDRRHVGETCMTPEAKLLILQER--------------QKSTGLKAEQLRRERELMNELLSVKEALRDAKQCPSCKMAISRTEGCNKMVCGNCGQYFCYRCNKAI--DGYDHFRV----ECELFSQEEITNWEIRM-------------NQRRVVGQLHAELFHNF--------------------------------VHPCPNCRQPNAKTGNNNHILCWACQTHFCALCR-KTVRRSSEHFGPNR-CKQHT 602          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: KXZ48731.1 (hypothetical protein GPECTOR_25g315 [Gonium pectorale])

HSP 1 Score: 208.8 bits (530), Expect = 5.400e-50
Identity = 157/596 (26.34%), Postives = 231/596 (38.76%), Query Frame = 0
Query:   85 GAYA--EAVSPHSDSTSESRKSQPPLTLRG--IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTL-QCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFRE--GAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFG-GAKPCKQHS 672
            G YA    + P  +    +  + P L   G  + +L P+ + L +P  YP   PP +S    W        +   L  +W+    GGP+   W++WL+ E +  L      V  R E                                                                     +L ++  +    F      C ICFEEH G   V L +C H +C  CL T   T + +G   +  L CP P C  ++ P +L+  +L  EEY RWE+L+L + LDKM D+  CPRC+ PCL +                        CP CF+ FC  C+D++H G+ C ++  RL  +E   AR   +   G   + ++ AR +  R    +SL+  ++    + CP C M VEK EGCNKM C  CG  +CWKC + IS  GY HF++  G  G C L++ E +  W  +                       H  +A  L  GR                         G ++ RC  C   N K   NN  RC +C  ++C +C      +   HFG G   C+QH+
Sbjct:  194 GGYATPRCLGPPVEEAPVAAATPPTLVPFGPPVAFLSPIRVTLTLPHGYPAACPPAVSLHAPWLSGPQAEALAAGLAGVWEAQGPGGPIALVWVDWLRGEALRHLAITDALVLRRGEAAATPLGAGVPARAAVDAAGPEVLAVS------------------------------------------LLRYSAAREQEKFNESNVRCPICFEEHLGSRCVRLPECRHAFCGGCLATHLRTQLRDGA--VDRLACPEPGCRRQLAPYVLQ-QMLGQEEYARWEQLTLQRTLDKMEDLVYCPRCREPCLEDPDHSVL------------------CPSCFYSFCALCEDSWHPGSSCLNAADRLALLE---ARRQRAGDAGDGRSATERARQQVNRMNELKSLA--LLSATTKQCPVCSMGVEKTEGCNKMTCGYCGSFFCWKCSRVIS--GYDHFQQPAGQPGGCVLFDQEEIDRWNARWNGGVVAPRVVQVEQ--------HAMIANYL--GR------------------------FGARMCRCVVCGQPNAKEGGNNCIRCWSCNGHFCYLCRTWLRNRPGQHFGTGPGRCRQHT 685          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: OAY65079.1 (E3 ubiquitin-protein ligase RNF14 [Ananas comosus])

HSP 1 Score: 208.8 bits (530), Expect = 5.400e-50
Identity = 164/611 (26.84%), Postives = 247/611 (40.43%), Query Frame = 0
Query:   70 EVID-IVVVADSEEACGAYAEAVSPHSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVY---QGGPVVFSWLEWLQYELVDRL-LEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAE---ESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            EV D I V A      G     V+ H+D       ++   T R ++YLPP+ L  ++P +YP   PP  +    W D    A++ + L RM D ++    G  +++ W+ W+Q   +  L  +    + V ++                                                                    L++++   +   AFL   H C ICF ++ G  F+ L C H++C  C+ T +S +V EG   +  L+CP   C   + P +LK  LL  E+YERWE L L + LD M DV  CPRC+T CL +                       +C +CFF FC  C+D  H G  C + EA+L  ++                  S   + E+LRR  E   E LS K   ++A+ CP+C M++ + EGCNKM C  CG  +C++C K I  +GY HFR      C L+  E +  W+ +M                     LH E+                                    +  C  C   N KT +NNH  C AC+ ++CA+C   T R++S+HFG  + CKQH+
Sbjct:  133 EVSDGISVSAKLHSDTGKLTSGVNRHADMAISENTNEFIYTFR-VQYLPPILLTCLLPQSYPSHHPPLFTITAQWLD---KAKI-SSLCRMLDTIWIAQPGQEIIYQWVYWIQNSSLSHLGFDSGVMLGVSDKPEAADRRALSGSASPEFI------------------------------------------------IPLMMSYNDEKRHEAFLNNLHQCDICFSDYAGTDFIKLPCQHFFCWKCMETYSSMHVKEG--TVTKLLCPDTKCGGLVPPSLLK-GLLGDEDYERWESLVLQKTLDSMSDVVYCPRCETACLEDADNH------------------AQCSKCFFSFCSLCRDRRHVGETCMTPEAKLLILQER--------------QKSTGLKAEQLRRERELMNELLSVKEALRDAKQCPSCKMAISRTEGCNKMVCGNCGQYFCYRCNKAI--DGYDHFRV----ECELFSQEEITNWEIRM-------------NQRRVVGQLHAELFHNF--------------------------------VHPCPNCRQPNAKTGNNNHILCWACQNHFCALCR-KTVRRSSEHFGPNR-CKQHT 602          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: GAU41460.1 (hypothetical protein TSUD_237100 [Trifolium subterraneum])

HSP 1 Score: 208.8 bits (530), Expect = 5.400e-50
Identity = 157/586 (26.79%), Postives = 234/586 (39.93%), Query Frame = 0
Query:   89 EAVSPHSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQ-NARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDI-SSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            E +S +SD    S K         ++YLPP+ L  ++P++YP   PP  +    W ++     + + L  +W E  QG  V++ W+EWL    +  L          EE                                                                     + ++   +    FL+  H C IC+ E+PG  FV L C H++CR CL T    +V EG  ++  L C    C   I P +LKH  L  E+YERWE + L + L  M DV  CPRC+TPC+ +  +                    +C QCFF FC  C++  H G  C + E +L        +L+       +L  +Q    L K+     E LS + V ++++ CP C M++ + EGCNKM+C  CG  +C++C K + +S+ Y HFR+   G+C L+  E +  WQRQ                      +H E+                                GG     C +C   N+K  +NNH  C AC+ +YC +C     R  S H+ G K CKQHS
Sbjct:  158 ETISGNSDDFLYSFK---------VQYLPPIILTCLLPMSYPSHQPPIFTISVKWLESAKILSLCSMLDSIWTE-QQGQEVIYHWVEWLHSSSLSHL-------GFDEEIRLGPYGTNRVADARVVSGIRCI----------------------------------------DADIPFLQSYNNEKHHQNFLKELHECCICYSEYPGTEFVQLPCKHFFCRKCLQTFTQIHVKEG--NVSNLQCLDAKCKDMIPPGLLKH-FLGDEDYERWESMMLEKTLASMSDVVYCPRCETPCIEDEDQH------------------AQCTQCFFSFCTLCRERRHVGIACMTLEMKL--------QLLQDRQNSSTLKGNQRQIELAKI----NEMLSEREVRRDSKLCPYCDMAISRTEGCNKMKCGNCGEYFCYRCNKPLDASDPYGHFRD--EGSCELFPREMVENWQRQ-----------THINPRQEIQQIHAEVFH-----------------------------AGG---SACPSCRQFNVKMGNNNHMLCWACQSHYCYLCNKIVMR-GSKHY-GPKGCKQHS 606          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_009400756.1 (PREDICTED: E3 ubiquitin-protein ligase RNF14 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 208.4 bits (529), Expect = 7.100e-50
Identity = 165/617 (26.74%), Postives = 257/617 (41.65%), Query Frame = 0
Query:   56 FHLRCEVDVALPPNEVIDIVVVADSEEACGAYAEAVSPHSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRCQ-CGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            F +R E D  LP     D + V+   ++     ++ S   +  ++S  S   L    ++YLPP+ L  ++P +YP   PP  +    W +++  + +  +L  +W E   G  + + W++WLQ   +  L  ++  +  R +                                                                     ++ +   +   +FL   H C ICF E+ G SF+ L C H++C  CL T ++ +V EG   +  L+CP   C   + P +LK  LL SE Y+RWE L L + LD M DVA CPRC+T CL +                       +C +CFF FC  C++  H G  C + E +L+ ++A             +L+ +Q   L   R    E LS K   ++A+ CP+C M++ + EGCNKM CQ CG  +C++C K I  +GY HFREG    C L+  E +  W+ QM                     + G++   L    G                              C  C  +N K  +NNH  C AC+++YCA+C   T RK+S+HFG  + CKQH+
Sbjct:  128 FQVRMEYD--LP-----DCINVSAMLQSSTTKVKSGSRSLNGRTKSDDSHEFLYTFNVQYLPPLLLTCLLPKSYPSHRPPYFTITVDWLNSEKISSLCHKLDAIWME-QPGQEITYQWVDWLQNYSLSYLGFDSGVMLDRYDMQDVKDIRADFGNARPDFI-----------------------------------------------ISSMINYDQEKCHQSFLNNLHQCIICFTEYAGTSFIKLPCQHFFCWKCLETYSNMHVMEG--TVTKLLCPTDRCGGFVPPGLLKR-LLGSEAYKRWESLVLQKTLDSMTDVAYCPRCETACLED------------------EEHHAQCSKCFFSFCSLCRERRHVGVECMTLEVKLQILQAR--------QNSSNLSRNQ---LHMEREMINEILSVKEALRDAKQCPSCKMAISRTEGCNKMVCQNCGQYFCYRCNKAI--DGYDHFREG----CELFPREEIERWEIQM-----------------NPRQVVGQIRAELYPNVGHP----------------------------CPTCRQVNPKVGNNNHIFCWACQKHYCAMCR-KTVRKSSEHFGPNR-CKQHT 604          
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_010096955.2 (E3 ubiquitin-protein ligase RNF14 [Morus notabilis])

HSP 1 Score: 208.4 bits (529), Expect = 7.100e-50
Identity = 153/564 (27.13%), Postives = 235/564 (41.67%), Query Frame = 0
Query:  113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWP-TRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAE---ESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672
            ++YLPP+ L  ++P +YP   PP  +    W D+   A + + L  +W E + G  V++ W+EWL    +  L  ++  +                                                                 S  P T    I +    +    F +    C ICFE++PG  FV L C H++C  C+   +  ++ EG   +  L CP   C   + P +LK  LLS EEYE WE L L + L+ M DVA CPRC+TPC+ +  +                    +C +CFF FC  C++  H G  C + E +L+ +E                  S   R E+ RR  E   E LS K + ++A++CP+C M++ + EGCNKM C  CG  +C++C K I  +GY HFR+   GAC+L+  + +  W+ +M                     + G++   L  G+G                      +G +    C  C   N K  +NNH  C AC+ +YC +C     R++S H+ G K CKQH+
Sbjct:  243 VQYLPPILLICLLPKSYPSHLPPYFTLSVQWLDSIKVANLCSMLGTIWKEQH-GQEVIYQWVEWLNSSALSYLGFDSEII------------------------------------------------LGPYGIRRVEDMRAVSGSVSPDTDVPFIRSFNDERLLENFRQNLQECCICFEDYPGTDFVRLPCHHFFCWKCMKAYSDMHISEG--TVSKLQCPEAKCGVMVPPSLLKR-LLSQEEYEWWESLMLQKTLESMSDVAYCPRCETPCIEDEDQH------------------AQCSKCFFSFCTLCREKRHLGVQCMTPELKLQILE--------------DRQKSSQLRDEQKRRELEMINELLSVKEILRDAKNCPSCKMAISRTEGCNKMACSNCGQYFCYRCGKAI--DGYDHFRD---GACDLYPPQMIQEWEERM-----------------NARQVLGQVQAQLFVGQG----------------------QGQL----CPNCRQFNAKVGNNNHLFCWACQVHYCYLCKKIV-RRSSRHY-GPKGCKQHT 672          
The following BLAST results are available for this feature:
BLAST of NO09G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_016201136.12.200e-5126.38E3 ubiquitin-protein ligase RNF14 [Arachis ipaensi... [more]
KMZ66483.13.700e-5126.28E3 ubiquitin-protein ligase RNF14 [Zostera marina][more]
OWM88266.13.700e-5127.24hypothetical protein CDL15_Pgr003678 [Punica grana... [more]
XP_015579960.11.900e-5026.82PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-prote... [more]
XP_020094867.14.100e-5026.84E3 ubiquitin-protein ligase RNF14 [Ananas comosus][more]
KXZ48731.15.400e-5026.34hypothetical protein GPECTOR_25g315 [Gonium pector... [more]
OAY65079.15.400e-5026.84E3 ubiquitin-protein ligase RNF14 [Ananas comosus][more]
GAU41460.15.400e-5026.79hypothetical protein TSUD_237100 [Trifolium subter... [more]
XP_009400756.17.100e-5026.74PREDICTED: E3 ubiquitin-protein ligase RNF14 [Musa... [more]
XP_010096955.27.100e-5027.13E3 ubiquitin-protein ligase RNF14 [Morus notabilis... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010905NSK010905Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03560.1NO09G03560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547655gene_10343Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100107g12gene3111Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03560.1NO09G03560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03560 ID=NO09G03560|Name=NO09G03560|organism=Nannochloropsis oceanica|type=gene|length=2414bp
CAGGAAACACAGGAGGCATGGGCGAGGAAGAAGAGTGTCGGGAGCAGCAG
CTGCTAGAGGTGGAATCGCTCCAAGCCATTTTGGGAAGCAGTGACCACAG
TCATTCGGGGGATGGGGAGGCAACAGAGATCCCCGGCGACGCAAGCTTCC
AGGTGCGAGGTGATGGCACAGTCAGAGAACCATTCCACCTGCGCTGCGAG
GTAGATGTGGCCCTGCCTCCTAATGAAGTAATTGACATCGTGGTGGTGGC
TGACTCCGAAGAAGCCTGTGGTGCGTACGCAGAGGCTGTGAGTCCTCATT
CTGACTCCACCTCTGAGAGTCGTAAGTCTCAACCTCCGCTAACCTTGCGC
GGCATCAAATACCTCCCTCCAGTCACGCTCCATCTTGTCATGCCGCTTAC
TTATCCCTTGGTCGCCCCACCTGAACTCTCGTTTGAGTGTGTGTGGTTCG
ACGCGCAGGCGACCGCGCGGGTGAGAACGGAGCTAGTGCGCATGTGGGAT
GAGGTGTACCAAGGTGGACCCGTAGTTTTTTCTTGGTTGGAATGGCTGCA
ATATGAGCTCGTGGATAGGCTTCTAGAAGAAGCAACGTCTGTCAATGTAA
GAGAAGAGGAGGACAAAGAGGGGGAAAAAGGAAAGGAAGCAGCAACAGGT
GGAGCAGAAGCAGCAAGTGAGGCCGGGTCACGACGACGACGGCTCGTCTT
GCGAGGACCGCCGCCATCATTACCCTCAACCAACAACGAAGAAGACTACG
TAGATGATACTAAAACCTCAACTTCCTCTTGTACTTCGTCCACTTGGCCC
ACACGCTTCCGCCTTATTCTTGCCCACGCGTACGTCCAAGCGAGCGCCGC
CTTCCTTCGAGGCACACATACGTGCTACATTTGCTTCGAGGAGCACCCAG
GGCACTCCTTCGTGACCCTCCAGTGCGGTCATTGGTGGTGTCGACCGTGC
TTGACAACAATGGCGAGCACGTACGTCGGGGAGGGAGGGCAGCACTTGCA
GTGGTTGGTGTGTCCCCGTCCCGATTGTGCTGCAGAAATCACGCCCGATA
TATTGAAGCATGATTTGTTGTCAAGTGAGGAGTATGAACGATGGGAGCGC
TTGTCATTACTGCAGGCGTTGGACAAAATGGGAGATGTGGCCCGTTGCCC
GCGTTGCCAGACCCCATGCTTGACGGAAGGTGGGAAGAAGGAGGGAGGGA
GCGAGGGGGGAGCTGTTAGCGGTGGCGCCGCTGCAGGTGACCTGGGCGAA
TGCCCTCAGTGCTTTTTTGTCTTTTGTCCGCAGTGTCAGGATGCGTACCA
TGCAGGGACACCGTGCTATTCGTCAGAAGCGAGGCTCAAACAAGTGGAAG
CCGAAATAGCGCGTTTGATGGCTTCGAGCCACGGCGGGAAGTCCCTGGCC
CCCTCCCAGAACGCCCGGCTTGAAAAGCTGAGAAGGGCGGCAGAGGAGTC
CTTGAGTAGGAAAGTTGTGGAGAAGAACGCAAGGTCCTGTCCGGCTTGTG
GGATGAGTGTGGAGAAGGTGGAGGGGTGTAACAAGATGAGgtacgctcgt
gggtatagagaagtggctgcgtctgtggtacagagaggtggtcgcgtctc
tcatcctccgtccgtctctccctccgttcctccatccctccctccacgtg
ccattttggatgctttccaattccgtcatactgttcttcattatttcctc
cctctctccctccctcccccttgtccgtagATGTCAATGCGGCGTGCTCT
GGTGCTGGAAATGCCGGAAAGACATTTCCTCTGAGGGTTACGCTCACTTT
CGCGAAGGCGCCGTAGGGGCATGTAATTTGTGGGAGGCGGAATCTTTGCT
TGCCTGGCAGAGACAGATGATGATGATGGAGGGCGGGCGGGAGGGAGGGA
GGGTGGCAGGATGGGGGGGAGGAGGAGGGGATTTGCATGGAGAGATGGCG
AGAATGCTGCAGTGGGGTCGGGGGTGGGATGGAGGTGGTGGAGGAGGAGG
AGAAGGAGGGGGACGTCGGCGTCGACGGGGGGAGGAGGTGGAGGGAGGAG
TGAAATTAGTCAGGTGTGGGGCTTGCAATGCGATGAATTTGAAAACGGAC
AGTAACAACCACAGGAGGTGCGGGGCGTGTCGAAGGAATTATTGCGCCGT
ATGCGGTTGTTGCACATTTCGAAAGGCAAGCGATCATTTTGGGGGCGCCA
AGCCCTGTAAGCAGCACTCGGGGGTGGGCTGAAAAAGGAAAGGAGGACAG
GGACGGAGGCGGGGAAGGAGGAAGGGAGGGTGGAATGTGAATGTGGGGCG
CGTGTAGATGGGTGGAGGGAATAATGTAGAGACTGGCCACAGATAAATTC
ACTCAAAGAAGAGTAGGTTCGAAAGAAGGCAAAAACACTGCTCCTTGAAA
GGGCAACAGAAGCA
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protein sequence of NO09G03560.1

>NO09G03560.1-protein ID=NO09G03560.1-protein|Name=NO09G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=675bp
MGEEEECREQQLLEVESLQAILGSSDHSHSGDGEATEIPGDASFQVRGDG
TVREPFHLRCEVDVALPPNEVIDIVVVADSEEACGAYAEAVSPHSDSTSE
SRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATA
RVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEEDK
EGEKGKEAATGGAEAASEAGSRRRRLVLRGPPPSLPSTNNEEDYVDDTKT
STSSCTSSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVT
LQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDL
LSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKKEGGSEGGAV
SGGAAAGDLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARL
MASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEK
VEGCNKMRCQCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAW
QRQMMMMEGGREGGRVAGWGGGGGDLHGEMARMLQWGRGWDGGGGGGGEG
GGRRRRRGEEVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCG
CCTFRKASDHFGGAKPCKQHSGVG*
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Synonyms
Publications