Naga_100107g12, gene3111 (gene) Nannochloropsis gaditana

Overview
NameNaga_100107g12
Unique Namegene3111
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1074281..1076936 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100107g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1074281..1076936 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03560NO09G03560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3233rna3233-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3233rna3233Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3233

>rna3233-protein ID=rna3233-protein|Name=rna3233|organism=Nannochloropsis gaditana|type=polypeptide|length=683bp
MSEEEECQEQQVLEVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRL
RCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKN
TSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPS
SRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEK
DANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADW
SLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGL
SFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVL
RHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGS
DEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLK
QVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSC
PACGMSVQKTEGCNKMRCQCGVLWCWKCRKDISTEGYAHFSENATGGCNL
WEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRG
WEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRC
GACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS
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Synonyms
Publications