NO09G03560, NO09G03560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03560 vs. NCBI_GenBank
Match: EWM27456.1 (e3 ubiquitin-protein ligase rnf14 [Nannochloropsis gaditana]) HSP 1 Score: 759.6 bits (1960), Expect = 8.200e-216 Identity = 424/696 (60.92%), Postives = 490/696 (70.40%), Query Frame = 0 Query: 1 MGEEEECREQQLLEVESLQAILGSSDHSHSGDGEATEIPGDASFQVRGDGTVREPFHLRCEVDVALPPNEVIDIVVVADSEEACGAYAEAVSPHSDSTSESRK---------------SQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLL-EEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-TWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGK-----XXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRCQCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQ--RQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXV-EGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672 M EEEEC+EQQ+LEVE+LQAILG+ G+A + SF VRGDG+ PF LRCEVD+ LP E IDI+V + +E+ H DS+ + P L LRGIKYL P+TL+L +P TYP+ PPEL+ E +W D ++ R++ EL RMW+E+Y GGPV++SW+EWL+++L++ LL E V+E+ + TW +RFR ++AHAY + SA FL+GTHTC+ICF+E PG SFVTLQCGHWWCR CL +MASTYV EGG HLQWLVCPRPDCA EITPD+L+H+LL+SEE+ RWERLSL QALD+M DVA CPRCQTPCLTEGG+ LGECP C FVFCPQCQDAYHAGTPCYSSEARLKQVE+EIARLMAS+ GG++LAPSQN RLEKLRRAAEESLSRKVVEK+A+SCPACGMSV+K EGCNKMRCQCGVLWCWKCRKDIS+EGYAHF E A G CNLWE E+LLAWQ XXXXXXXXXXXXXXXXXXXX LHGEM RMLQWGRGW+XXXXXXXXXXXXXXXXX E GVKLVRCGAC+AMNLKTDSNNHRRCGACRR+YCAVCGC TFRKASDHFGG+KPC+QHS Sbjct: 1 MSEEEECQEQQVLEVEALQAILGA--------GQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRT-----SESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRCQCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQXXXXXXXXXXXXXXXXXXXXXXXXXDLHGEMVRMLQWGRGWEXXXXXXXXXXXXXXXXXEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
BLAST of NO09G03560 vs. NCBI_GenBank
Match: PRW20570.1 (E3 ubiquitin- ligase RNF14 [Chlorella sorokiniana]) HSP 1 Score: 246.9 bits (629), Expect = 1.800e-61 Identity = 191/563 (33.93%), Postives = 261/563 (46.36%), Query Frame = 0 Query: 113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMA-RMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKAS--DHFGGAKPCKQHS 672 ++YLPP+ + L + +YP PPE+S +W A++ +L +W E G PV +SW +WLQ + L AT + E XXXXXXXXXXXXXXXXXXXXXXXXXXXX + R +L + ++ F G HTC +C EE G +FV L C H WC+ CL A +V EG ++ + CP P C A ++P +L+ +LS +++ RWE+L+L + LD M D A CPRC T + + +CP+C FVFC C + +H GT C S+E +L A L GG A +E LRR ++ LS +EK A+ CP CGM+ +K EGCNKM C CG WCW+C K+I +GY HFR G C L++ +L W+ Q GE A R + RG C C +N K +NNH C +C ++C +C K + HF G + CKQHS Sbjct: 152 VQYLPPICMQLRLVPSYPSQQPPEVSLSALWLSTSQAAQLELQLAALWHEQGPGAPVCYSWADWLQSSALQHL--GATDTLLLE--------------------GQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAVGAAEEEESPEDRLLKLLRYNALEEHRTFAEGMHTCGVCLEEQRGTAFVRLDCRHAWCQGCLAAAARIHVAEGS--IEQIKCPNPQCGAPLSPTVLQR-VLSPDDFSRWEQLTLQRTLDTMPDAAYCPRCSTLSIED------------------EDSCAQCPKCLFVFCSLCNEGWHPGTQCVSAETKL-------AMLRRKMEGG------SRAAIEDLRRQEQDLLSLAQIEKMAKKCPRCGMATQKAEGCNKMSCGGCGAYWCWRCGKEI--DGYRHFRS---GECILFDEAEILRWEAQWEEMQAAARVMAAGMRNEFV----GETATRQGRRPRG----------------------------CFCPNCGQLNHKMGNNNHMSCWSCTSHFCYLCRAVLRGKGAGGSHF-GPRGCKQHS 620
BLAST of NO09G03560 vs. NCBI_GenBank
Match: PSC70292.1 (E3 ubiquitin-ligase RNF14 [Micractinium conductrix]) HSP 1 Score: 244.6 bits (623), Expect = 8.900e-61 Identity = 228/678 (33.63%), Postives = 302/678 (44.54%), Query Frame = 0 Query: 9 EQQLLEVESLQAILG--------SSDHSHSGDGEATEIPGDASFQVRGDGTVREPFHLRCEVDVALPPNEVIDIVVVADSEEACGAYAEAVSPHSDSTSESRKSQPPLTLRGIK--YLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAY--VQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRK--ASDHFGGAKPCKQHS 672 ++Q+ EV++L+AI G S G G+A GDA+ G GT +D + +D ++ E G + PH + G + +LPP+ + L + YP PP+LS W A+ +++ +L +W+E G PV ++W +WLQ ++ +L + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX W L++ Y VQ AF HTC +C EE PG F L C H WC CL AS V EGG L+ L CP P C A + P L+ LL++EE+ RWE+L+L + LD M D A CPRC T + + + P+CFFVFC C + +H GT C S+E +L A L GG A LE LRR +E LS +EK A+ CP CGM+ EK EGCNKM C CG WCW+C K+I +GY HFR G C L++ +L W+ Q AR+ G D G + C C +N K NNH C +C ++CA C K + HF G + CKQHS Sbjct: 13 QEQVDEVQALEAIYGDDFRLAAASDVLPAEGRGDAN---GDAASSSSGRGTEPLDAATLAVLDAPASDSWQLDCSLLVRPELPAGGLRLQL-PHDEXXXXXXXXXXXXXXXGYRAEHLPPLCMQLRLAAGYPSRQPPQLSLSAAWLSGGASQQLQEQLQALWEEQGPGIPVCYAWADWLQGGVLRQLAPGGS-------------------------------LQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWQAEDTLMMLLRYNAVQEHQAFHVSMHTCGVCLEEQPGRQFTRLDCRHAWCSSCLGAQASLAVAEGG--LERLRCPDPQCKAPLPPSALQR-LLTAEEFARWEQLTLQRTLDSMPDAAYCPRCSTISIEDADS------------------CAQXPKCFFVFCSLCNEGWHPGTTCVSAETKL-------AMLRRKMEGG------GRAALEDLRRQEQELLSVAQIEKTAKKCPRCGMATEKAEGCNKMSCGGCGAYWCWRCGKEI--DGYKHFRS---GDCILFDEAEILRWEAQWDEMQ--------------------AAARIAAAGMRND-----------FMAETVARAGGRPRGCFCPQCGQVNHKIAQNNHISCWSCGGHFCAQCHAVLRGKGAGASHF-GPRGCKQHS 584
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_005844643.1 (hypothetical protein CHLNCDRAFT_138969 [Chlorella variabilis] >EFN52541.1 hypothetical protein CHLNCDRAFT_138969 [Chlorella variabilis]) HSP 1 Score: 241.1 bits (614), Expect = 9.800e-60 Identity = 166/569 (29.17%), Postives = 235/569 (41.30%), Query Frame = 0 Query: 113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQ-CGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVE-------KNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVC-GCCTFRKASDHFGGAKPCKQHS 672 ++YLPP+ + L + YP PP +S +W A AR++ +L+R+W E GGPV ++W +WLQ + L E + + R +L + VQ AAF R HTC +C EE PG +FV L+ C H WC CL A +V EGG L+ L CP P C A + P +L+ +LS +++ RWE+L+L + LD M D A CPRC + L + +CP C FVFC C + +H GT C S+E +L V ++A GG+ A ++ LRR +E LS +E K ++ CP CGM+ +K EGCNKM C CG WCW+C K+I +GY HFR G C L++ +L W+ Q AR++ G +R C +N K +NNH C +C ++C C R A G + CKQHS Sbjct: 176 VQYLPPICMQLRLGGGYPGQEPPGVSLSALWLGAAQVARLQRQLLRLWHEQGPGGPVCYTWADWLQSSALQHLGGEQALLLADD----------------------APSSDGSTNGGGVAAGEPRAGSSGRPDSPGAEGGDEVEQEVAEERLVKLLRYDAVQEHAAFQRARHTCGVCLEEAPGTAFVRLEGCRHAWCALCLAEQARIHVAEGG--LEKLRCPDPGCGAALAPGVLRR-VLSPDDFGRWEQLTLQRTLDTMPDAAYCPRCSSLALEDADS------------------CAQCPTCLFVFCSLCNEGWHPGTTCVSAETKLAMVRRKLA------GGGR-------AAVDDLRRQEQELLSLAQIEAGWAALCKMSKRCPQCGMATQKAEGCNKMACGGCGAYWCWRCGKEI--DGYRHFRS---GQCILFDEAEILRWEAQWEEMQ--------------------AAARVMAAG------------------------------LRNEMCGQVNHKIGNNNHLACWSCTSHFCYCCRAVLRGRGAGGSHFGPRGCKQHS 633
BLAST of NO09G03560 vs. NCBI_GenBank
Match: CEL92756.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 225.3 bits (573), Expect = 5.600e-55 Identity = 193/631 (30.59%), Postives = 264/631 (41.84%), Query Frame = 0 Query: 67 PPNEVIDIVVVADSEEACGAYAEAVSPHSDSTSESRKSQPPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQ-----YELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQ-CGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVR-----------------CGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKAS--DHFGGAKPCKQHS 672 P +E ID V+A EE + + D R Q + + +++LPP++LH+VMP YP P + +W D A R+ L ++W+E G P+VF+W +L Y + RL+ A +REE +L + + + HTC ICF+ G L C H +C CL + T+V +G +L L CP P C I P++L H LL +EYERW+RLSL +ALD MGD+ CPRC+ L CP+C F FC C+ +H GT C E L+ +EA S G K+ R + L++ AE S K +++ AR CP CGM++ K EGCNKM+C QC +CWKC + IS GY HF CNL++ E + W R M XXXXXXXXXXXXXXXXXXX EG ++ R C C++ N K +NNH C ACR N+C +CG K + HFG C+QH+ Sbjct: 109 PSDEAID--VIARFEEPSAQHHPNYAGDEDHPDRLRIEQQDVPIGRVRFLPPLSLHIVMPPAYPSRRSPFFTLSAMWIDKGAVGRLCRRLDQLWEEEGPGSPIVFTWANFLSTDSMGYLSMGRLIVIAP---LREEGGDGHTTGDPRAMQECADVGVCVEE--------------------------------------------LLRYDASREDVEYRSTKHTCMICFDVMLGERMDRLPGCRHAYCTQCLAGLVKTHVKDGAINL--LRCPEPSCGRSIDPEVL-HRLLDEDEYERWQRLSLQKALDGMGDLVYCPRCEA------------HRNENTAVLEDADHLARCPKCHFAFCGICRAEWHPGTACLDPEQLLEVLEAR-------SKGDKAYGEEVLRREQNLKQEAE---SLKTIKREARQCPTCGMAIYKTEGCNKMKCEQCYTNFCWKCLQPIS--GYEHFANNP--NCNLFDMEEIERWNRMMRGLNHPRGPLGRPVVRRHPQFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGRLRAPRRPRRGHRAAGMMLRIRQCPQCHSRNQKQGANNHIICWACRANFCYLCGARLQGKGAIGAHFGLGARCRQHT 661
BLAST of NO09G03560 vs. NCBI_GenBank
Match: GAQ78006.1 (hypothetical protein KFL_000060730 [Klebsormidium nitens]) HSP 1 Score: 221.5 bits (563), Expect = 8.000e-54 Identity = 174/611 (28.48%), Postives = 240/611 (39.28%), Query Frame = 0 Query: 82 EACGAYAEAVSPHSDSTSESRKSQPP--------------LTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRL-LEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRL--ILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTL--QCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQV-EAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672 E+ A A VS + E+ +PP L +++LPP+ L +P YP +PP + VW R+ L +W E QG VV+SW +WL E + L L E+ + W + L +L + + F +G H C +CF E PG FV L C H +CR C+T++ +V EG L L CP DC + P+I+K DLL+ E+++RWE L L + D M DV CPRC+T + E +C +CFF FC C DA H G+ C +EA+L + E RL A K A E L+ K VE+ A+ CP CGM+++K EGCNKM C C +C+KC K IS GY HF GAC L+EA + AW R M A++ + ++ C AC N+K NNH RC +C+ ++C CG K S HF G K CKQH+ Sbjct: 217 ESATAQAGEVSEAAAEEKETNGKEPPRGQIWVAKSWQGGRLLSLTLEHLPPLRLTCTLPAAYPSHSPPRFALSSVWLTRPQLGRLCRGLDEVWQE-NQGQVVVYSWADWLTRETFETLDLGESFELG-------------------------------------------GTLNAEGKGKESAEHDERAQAEGWGVQDVLSRLLRYNEEKTMEEFRKGVHECQVCFAEQPGTEFVHLWPGCRHNFCRGCMTSLVDIHVKEGS--LARLTCPDTDCKEPLPPNIIK-DLLAPEQFQRWETLMLQKTFDSMSDVVYCPRCETATIEE------------------PDHTAQCQKCFFAFCSLCDDATHFGSQCMDAEAQLAVLRERTRGRLPAEEQKRKEAA------------LLNEILNMKYVEREAKKCPKCGMAIQKDEGCNKMTCWNCSSYFCYKCGKAIS--GYDHFNS---GACVLFEAAEIDAWNRMMAGVNAPRNEARDRID-----------AQIQMYPN---------------------------RVRACPACRQPNVKEAGNNHLRCWSCQNHFCGACGKAVL-KGSHHF-GPKGCKQHT 705
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_002499781.1 (predicted protein [Micromonas commoda] >ACO61039.1 predicted protein [Micromonas commoda]) HSP 1 Score: 218.0 bits (554), Expect = 8.900e-53 Identity = 160/568 (28.17%), Postives = 234/568 (41.20%), Query Frame = 0 Query: 113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHP-GHSFVTL---QCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGG-VKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFR--KASDHFG-GAKPCKQHS 672 + Y PPV LH + P YP +PP L+ W +AT + MW G P VF WL VD +N+ FRL L H V+ F TH C +C E+ G FV L +C H +C C+T+ A+ V +G L LVCP P C A P++L+ +LS E+Y RWERL+L ++LD M D+ CPRC+ P + +G G C C F FC C++++H G C + E RL+ +E+ RL ++ G +AR + R ++++++ +++ + CP C V K EGCNKM C CG +C+KC K++ GY HFRE G C+L++ +++ AW+R+M A ++Q R D V GG V+ RC C N K + NNH C +C +++C C R + DH+G G C+QHS Sbjct: 117 VVYPPPVALHAIFPRDYPSASPPLLALTASWLPPEATEAACDTMAAMWT---PGAPAVFEMAGWLAESSVDECFAPGGVLNLE-----------------------------GCNLLQGGRKGGPRGGTECAARTTTLRGVCTSRDAQEALFRL-LRHDAVEKERQFAVRTHRCGVCLEDDVLGADFVRLCKPRCDHRFCARCVTSQATLMVRDGTVGL--LVCPEPGCGAPPDPEVLR-SVLSPEDYARWERLTLERSLDAMSDLVYCPRCEAPVIEDG----------------DGDHCGRCASCMFAFCSLCRESWHPGETCLTPERRLRVLESR--RLGDAAMG-------DDAR-RRHREQVADAMAQRYIDREGKQCPRCNTGVVKSEGCNKMTCGGCGCFFCYKCGKEVF--GYEHFRE---GDCSLFDLDAIAAWEREM------------------------NAAFVVQENRNRD-----------------AHVRGGEVRQTRCPKCRQPNWKLERNNHVLCWSCNQHFCCACMRVVRRGQETRDHYGTGPGKCRQHS 576
BLAST of NO09G03560 vs. NCBI_GenBank
Match: XP_003612847.1 (E3 ubiquitin-protein ligase RNF14 [Medicago truncatula] >AES95805.1 NDR1/HIN1-like protein [Medicago truncatula]) HSP 1 Score: 216.9 bits (551), Expect = 2.000e-52 Identity = 152/561 (27.09%), Postives = 232/561 (41.35%), Query Frame = 0 Query: 113 IKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDIS-SEGYAHFREGAVGACNLWEAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFGGAKPCKQHS 672 ++YLPP+ L ++P +YP PP + W ++ + ++L +W E QG V++SW+EWLQ + L EE + ++ + FL+ H C +C+ E+PG FV L C H++CR CL T +V EG ++ L C C I P +LKH L EEYERWE + L + L M DVA CPRC+TPC+ E + +CP+CFF FC C++ H G C + E +L+ ++ SSH + + A++ E LS K + ++++ CP C M++ + GCNKM+C CG +C+ C K + S+ Y HFREG G+C L+ E + WQ ++ +H E+ + GG C +C N+K +NNH C AC+ +YC +C T R+ + H+ G K CKQH+ Sbjct: 197 VQYLPPIVLTCLLPKSYPSHQPPIFTISVKWLESAKILSLCSKLDSIWTE-QQGQEVIYSWVEWLQNSSLSHL-------GFDEEIRLGPYGWNRVADARVVSGIGCI----------------------------------------DADIPFLQSYNNERRHQNFLKELHECCVCYSEYPGTEFVRLPCKHFFCRKCLQTFTQIHVKEG--NVSNLQCLDAKCKEMIPPGLLKH-FLGDEEYERWESMMLEKTLASMSDVAYCPRCETPCIEEEDQH------------------AQCPKCFFSFCTLCRERRHVGIACMTLEMKLQLLQDR----QNSSHLKGNQKQIELAKI-------NEMLSIKAIHRDSKLCPYCDMAISRTGGCNKMKCGNCGKYFCYLCNKALDPSDPYGHFREG--GSCELFPQEMVDNWQPRI-------------NPRQEVQQIHAELFHL-----------------------------GG---SACPSCRQFNVKIGNNNHMLCWACQSHYCYLCN-KTVRRGTKHY-GPKGCKQHT 628
BLAST of NO09G03560 vs. NCBI_GenBank
Match: PTQ30446.1 (hypothetical protein MARPO_0124s0022 [Marchantia polymorpha]) HSP 1 Score: 216.5 bits (550), Expect = 2.600e-52 Identity = 162/622 (26.05%), Postives = 260/622 (41.80%), Query Frame = 0 Query: 56 FHLRCEVDVALPPNEVI--DIVVVADSEEACGAYAEAVSPHSDSTSESRKSQ-PPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLW-EAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFG-GAKPCKQHS 672 ++L+ V+V + N ++ + ADS + G+ + S S S S+ + ++ LPP L +P++YP +PP + +W ++ +R+ + L ++W E +G V++SW+EWLQ + T + + E+ ++ + +L H + + F + HTCYICF EH G F L C H +C C+ T+A+ +V EG + L CP C I P +LK +LL E ++RWE L L ++LD M D+ CPRC+T C+ E +C +CF+ FC C+ ++H G C S+EARLK ++ G +++ S + K E ++ V + A+ CP C M++ K EGCNKM C C +C+KC + I +GY HF A G C L+ E + + WQ + E+ + GR +C C +N+KT +NNH C ACR +YC +C R+ S+H+G G C+QH+ Sbjct: 21 YNLQISVNVDISENIILWAEHPSTADSSSSVGSEPSSTIDGSSVASTSGASEKDSMHSFTVQSLPPFRLVYTLPVSYPSHSPPLFTLSSMWLNSAKLSRLCSALDKIWAE-QKGQVVLYSWIEWLQ-------TQSLTFLGMFEKLELGPYTVDGEICRQDSDERASSGCI-----------------------------------SFESDIARLLRHNEERRNEEFCKAIHTCYICFSEHLGKDFARLPCQHIFCMDCMQTLATVHVKEGS--VNKLNCPDTSCRGSIPPYLLK-ELLEEEVFQRWEDLVLQRSLDAMMDIVYCPRCKTVCIEEEDNFV------------------QCTKCFYSFCSLCRQSWHVGQECMSAEARLKILQ-----------GRRNMGQSDEDQRRKEEELRNEMMNMNYVRREAKQCPKCKMAISKSEGCNKMVCSNCDQFFCFKCGEAI--KGYDHF---ADGQCELFVEVQEIARWQPE---------------ALLLQQQAQAELELWPERGR------------------------------QCPNCRQLNVKTRNNNHIYCWACRSSYCCLC-YKVVRRTSEHYGSGPSKCRQHT 516
BLAST of NO09G03560 vs. NCBI_GenBank
Match: PTQ30445.1 (hypothetical protein MARPO_0124s0022 [Marchantia polymorpha]) HSP 1 Score: 214.5 bits (545), Expect = 9.800e-52 Identity = 158/598 (26.42%), Postives = 248/598 (41.47%), Query Frame = 0 Query: 78 ADSEEACGAYAEAVSPHSDSTSESRKSQ-PPLTLRGIKYLPPVTLHLVMPLTYPLVAPPELSFECVWFDAQATARVRTELVRMWDEVYQGGPVVFSWLEWLQYELVDRLLEEATSVNVREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTWPTRFRLILAHAYVQASAAFLRGTHTCYICFEEHPGHSFVTLQCGHWWCRPCLTTMASTYVGEGGQHLQWLVCPRPDCAAEITPDILKHDLLSSEEYERWERLSLLQALDKMGDVARCPRCQTPCLTEGGKXXXXXXXXXXXXXXXXXXLGECPQCFFVFCPQCQDAYHAGTPCYSSEARLKQVEAEIARLMASSHGGKSLAPSQNARLEKLRRAAEESLSRKVVEKNARSCPACGMSVEKVEGCNKMRC-QCGVLWCWKCRKDISSEGYAHFREGAVGACNLW-EAESLLAWQRQMXXXXXXXXXXXXXXXXXXXXXLHGEMARMLQWGRGWDXXXXXXXXXXXXXXXXXXXVEGGVKLVRCGACNAMNLKTDSNNHRRCGACRRNYCAVCGCCTFRKASDHFG-GAKPCKQHS 672 ADS + G+ + S S S S+ + ++ LPP L +P++YP +PP + +W ++ +R+ + L ++W E +G V++SW+EWLQ + T + + E+ ++ + +L H + + F + HTCYICF EH G F L C H +C C+ T+A+ +V EG + L CP C I P +LK +LL E ++RWE L L ++LD M D+ CPRC+T C+ E +C +CF+ FC C+ ++H G C S+EARLK ++ G +++ S + K E ++ V + A+ CP C M++ K EGCNKM C C +C+KC + I +GY HF A G C L+ E + + WQ + E+ + GR +C C +N+KT +NNH C ACR +YC +C R+ S+H+G G C+QH+ Sbjct: 241 ADSSSSVGSEPSSTIDGSSVASTSGASEKDSMHSFTVQSLPPFRLVYTLPVSYPSHSPPLFTLSSMWLNSAKLSRLCSALDKIWAE-QKGQVVLYSWIEWLQ-------TQSLTFLGMFEKLELGPYTVDGEICRQDSDERASSGCI-----------------------------------SFESDIARLLRHNEERRNEEFCKAIHTCYICFSEHLGKDFARLPCQHIFCMDCMQTLATVHVKEGS--VNKLNCPDTSCRGSIPPYLLK-ELLEEEVFQRWEDLVLQRSLDAMMDIVYCPRCKTVCIEEEDNFV------------------QCTKCFYSFCSLCRQSWHVGQECMSAEARLKILQ-----------GRRNMGQSDEDQRRKEEELRNEMMNMNYVRREAKQCPKCKMAISKSEGCNKMVCSNCDQFFCFKCGEAI--KGYDHF---ADGQCELFVEVQEIARWQPE---------------ALLLQQQAQAELELWPERGR------------------------------QCPNCRQLNVKTRNNNHIYCWACRSSYCCLC-YKVVRRTSEHYGSGPSKCRQHT 712 The following BLAST results are available for this feature:
BLAST of NO09G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03560 ID=NO09G03560|Name=NO09G03560|organism=Nannochloropsis oceanica|type=gene|length=2414bpback to top protein sequence of NO09G03560.1 >NO09G03560.1-protein ID=NO09G03560.1-protein|Name=NO09G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=675bpback to top Synonyms
Publications
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