NO09G03300, NO09G03300 (gene) Nannochloropsis oceanica

Overview
NameNO09G03300
Unique NameNO09G03300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr9:948778..950640 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase 2c ptc1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:948778..950640 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of NO09G03300 vs. NCBI_GenBank
Match: CBN78332.1 (Protein phosphatase 2C containing protein [Ectocarpus siliculosus])

HSP 1 Score: 179.9 bits (455), Expect = 2.500e-41
Identity = 140/436 (32.11%), Postives = 186/436 (42.66%), Query Frame = 0
Query:  170 GLKSSHANWINQDNFILLDAEQQQQTSHSVSLPSSSLLPSSHPVSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLPAFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYI--SYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQV 604
            GLK ++  W NQDN+++ +                        V ++ VLDGHGE GHLVS+R    LP+ +V +      A   M +DL  CP +D A SG+TCV+   R    +GK        ++V NLGDS+CVL R                                                                               N ++ A+PL++DHKPDRPDE +RI AIGGQVG R  +  S P+                                       I +GPAR+WY  RG+  GLAMSRS GD   H AG SSEPEV E+++           D FLILA+DGVWDV +  +AV++V  + S       G  WD + AA  L   ARKRW+ +S  ++DDIT +VV L V
Sbjct:    2 GLKPNNPRWENQDNYVMKED------------------LGGLGVRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCP-VDCASSGATCVLTTIR----DGK--------ISVANLGDSKCVLAR-----------------------------------------------------------------------------LVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPS-----------------------------------GPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQID--------ANDQFLILATDGVWDVTEIGQAVQIVQGYASRC----RGNSWDPQGAASLLAHSARKRWEGLS-AVVDDITALVVRLTV 281          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: EWM27477.1 (protein phosphatase 2c ptc1 [Nannochloropsis gaditana])

HSP 1 Score: 162.9 bits (411), Expect = 3.100e-36
Identity = 86/163 (52.76%), Postives = 106/163 (65.03%), Query Frame = 0
Query:  470 ITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVR------------------------ERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVS-------TGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNL 602
            +TLGPAR+WY +RGDRNGLAMSRSFGD+AVHA GG+S+PEV+EY V+                        E+G + E EED FLILASDG+WDVVDNQEAV++V  +   S        GG + G W  ++AA ALV  AR RW+ +SP  IDDITC+VV L
Sbjct:  317 VTLGPARLWYQYRGDRNGLAMSRSFGDTAVHAVGGTSQPEVMEYLVKGGRSEGGKTCIGREEEEGGEGVMHEKGMEVEDEEDAFLILASDGLWDVVDNQEAVEIVDRYARASFRAGERREGGGKVGGWQPRKAAAALVSFARSRWEYLSPLSIDDITCVVVRL 479          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: BAK02837.1 (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 106.7 bits (265), Expect = 2.700e-19
Identity = 115/465 (24.73%), Postives = 166/465 (35.70%), Query Frame = 0
Query:  150 HDPEDCYSLSGSVSGMC-----TAQGLKSSHANWINQDNFILLDAEQQQQTSHSVSLPSSSLLPSSHPVSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQ---TQFDPLPAFRLMQNDLVM---CPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVV-GHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQ 603
            HD +    L     G C     + +G    + N +NQD  ++  A Q   +                 + ++AV+DGHGE GHLV+Q V++HLP YL +    + DP  A       +V       ++ A SG+T +  +  N              L V N+GDSRCVL                                                                             RS  +  I A+ L+ D KP+ PDE  RI   GG+V                                                    GP R+W     D  GLAMSRS GD      G  S PE++++ +     DG    D+F I A+DGVW+ + NQEAV++V  H  S+ T   E            LV+ A +RW +   +++DDITCI+++ Q
Sbjct:   57 HDLDGLTELEFKARGKCKHASLSKKGFVPYNKNKVNQDREVVKFAMQNDAS-----------------ICLFAVMDGHGEWGHLVAQFVKEHLPEYLTKQPNLKSDPPQAILTGVQQMVAELGHSNINCAFSGTTAIFTVKVN------------DTLYVANIGDSRCVL----------------------------------------------------------------------------ARSKPDGSIEAVALSTDQKPENPDEKARILKAGGRV-----------------------------------------EPLPGPPGEDCGPPRVWLA-EVDVPGLAMSRSIGDEVSQTVGVISVPEILKHEI-----DG--SSDLFAIWATDGVWEFISNQEAVELVHKHRKSLKTATEE------------LVKAAHERWTK-EEEVVDDITCIILDFQ 354          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: OMJ88401.1 (hypothetical protein SteCoe_9724 [Stentor coeruleus])

HSP 1 Score: 103.2 bits (256), Expect = 2.900e-18
Identity = 105/398 (26.38%), Postives = 152/398 (38.19%), Query Frame = 0
Query:  213 VSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLPAFRLMQNDLVMCPL------LDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQV-GYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQV 604
            V ++ V DGHG  G  VS  ++Q LP  L Q +       + + + +  C L      LDV  SGST V+V+             +G IL   N+GDSR  +GR+                                                                    I  N+ +S S ++  +I L+ DHKPD  DE  RI   GG+V  Y+     PA                                          GPAR+W     D  GLAMSRS GD    + G   +PE++E ++        V ED F+I+ASDGV++ + N+E V++V  +  +          D +    A+VR A KRWKR   ++IDDIT + + L +
Sbjct:  157 VYLFGVCDGHGFYGGEVSNFIKQRLPVLLAQDRDILSNPNKSLVSCIHRCNLELNQINLDVKFSGSTLVVVLI------------KGNILYCANVGDSRAFMGRQ--------------------------------------------------------------------ILDNTDKSISGKKWMSIALSRDHKPDSKDESERIYKSGGRVEAYQDENGNPA------------------------------------------GPARVWLK-NQDIPGLAMSRSLGDGVAASVGVICDPEILEIKL--------VPEDKFIIIASDGVFEFISNEEIVRIVVPYYRMQ---------DCEGTCDAIVREANKRWKR-EEEVIDDITAVCIFLDI 413          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: EJY79945.1 (Protein phosphatase 2C containing protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 102.8 bits (255), Expect = 3.800e-18
Identity = 68/219 (31.05%), Postives = 103/219 (47.03%), Query Frame = 0
Query:  386 RSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQVK 605
            R  ++  + A+PL  DHK   PDE +RI   GG++                                                   LGP R+W+    +  GLAMSRSFGD +    G  SEPE++E  +        VE+D F+++ASDGVW+ + N+E VK+V  F   ++         A++AA AL+R + KRWK+    ++DDITCI++ L ++
Sbjct:  856 RQVNSLTLDALPLNRDHKASEPDEEKRILMAGGRI-----------------------------------------ESFKDAQGRQLGPLRVWH-MNENIPGLAMSRSFGDHSAVEVGVISEPEILEMNL--------VEDDKFIVIASDGVWEFLSNEEVVKIVEPFYKTNS---------AEKAADALIRESLKRWKQ-EENVVDDITCIIIFLSIQ 1014          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_001456670.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK89273.1 unnamed protein product (macronuclear) [Paramecium tetraurelia])

HSP 1 Score: 99.8 bits (247), Expect = 3.200e-17
Identity = 108/440 (24.55%), Postives = 160/440 (36.36%), Query Frame = 0
Query:  167 TAQGLKSSHANWINQDNFILLDAEQQQQTSHSVSLPSSSLLPSSHPVSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQT-QFDPLPAFRLMQNDLVMCPLL-----DVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVG-HFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVV 600
            T QG  +S+ N  NQD FI                  ++++   H   +++V DGHG+ GH VSQ VR H    L +  Q    P   ++++  V+  L+     D   SG+T  +++ ++           G  L   N+GDSR ++                                                                            GR  +N+R    PL+ DHKP    E+ RI   GG+V                                                  ++GPAR+W    G+  GLAMSRS GD    + G SS PE+ EY++          +D F+IL SDGVW+ +DNQ  V +VG H++    G  EG       A   L++I+ K W      ++DDIT IV+
Sbjct:  160 TRQGQLASNPNKTNQDTFIC----------------ETNIVSDMH---LFSVCDGHGQNGHFVSQYVRDHFTKLLKRDHQLKQHPRQAIVKSISVLANLINQQPFDTQFSGTTMNVILIQD-----------GGHLICSNVGDSRAIV----------------------------------------------------------------------------GRLGNNQRFKPFPLSIDHKPCIEKEMNRIHMHGGRV-----------------------------------------DTYYDDQGNSIGPARVWVR-DGNYPGLAMSRSLGDQIAQSVGVSSVPEIFEYQL--------TPQDKFIILGSDGVWEFIDNQSVVDIVGRHYLQ---GNLEG-------ACDELMQISYKMWTLEDDSVVDDITFIVI 433          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_013906755.1 (hypothetical protein MNEG_0205 [Monoraphidium neglectum] >KIZ07736.1 hypothetical protein MNEG_0205 [Monoraphidium neglectum])

HSP 1 Score: 99.8 bits (247), Expect = 3.200e-17
Identity = 105/407 (25.80%), Postives = 135/407 (33.17%), Query Frame = 0
Query:  214 SIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLPAFRLMQNDLVMCPL------LDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIW--YTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQVKDKNEEGEG 613
            S++  +DGHG  GHLVS  V+QHLP  L         A R +    + C        +D   SGSTCV+               +G  LT   +GDSRCVL                                                                            GR S +    A+ LT DHKP  P E  RI    G+V                                                   +GP R+W  Y W     GLAMSR+ GD   H  G SSEPE  +  +          ED F++LASDGVW+ + +QEAV++V                D +EA  ALV  A +RW      ++DDIT +VV          G G
Sbjct:  192 SLFGAMDGHGPHGHLVSSFVKQHLPLLLADRLASGDCAMRALSEGFLECDARLGCSRIDCEFSGSTCVV------------AHLKGAQLTTAWVGDSRCVL----------------------------------------------------------------------------GRLSPSGAWEAVELTADHKPTNPGEKERILRSQGRV-----------------------------------------ERLVDELGQPMGPDRVWLQYAW---VPGLAMSRALGDQLAHQVGVSSEPEHQQVAL--------APEDRFMVLASDGVWEFISSQEAVELVAALD------------DPEEAGEALVEEAFQRWLVEEEGVVDDITVVVVRFHHGSHGANGVG 446          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: CEM13721.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 99.8 bits (247), Expect = 3.200e-17
Identity = 104/393 (26.46%), Postives = 146/393 (37.15%), Query Frame = 0
Query:  216 YAVLDGHGEQGHLVSQRVRQHLPHYLVQ---TQFDPLPAFRL---MQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQV-GYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNL 602
            + V+DGHG QG  VSQ + + LP+YL      + DP  A +      N  +    LD+  SGST + V              RG  L   ++GDSR + G+ K                                                                            +  R  A  L++DHKPDRPDE +RI    G+V  +R     P                                          +GP R+W   + D  GLAMSRS GDS   + G ++EPE+  + +          ED F++LASDGVW+ +DN+E VK+V  F           + D + A  ALV+ + +RW R   ++IDD T IVV L
Sbjct:  167 FCVMDGHGYQGREVSQLITRRLPNYLQSEPTLRTDPKAAIQKAFHKTNHELFRSSLDITFSGSTTISVFI------------RGATLYSASVGDSRAICGKFK---------------------------------------------------------------------------GAYGRWSAQALSDDHKPDRPDEKKRIEDRDGRVESFRGSDGEP------------------------------------------IGPPRVWLKDQ-DAPGLAMSRSMGDSVAASVGVTAEPEIKIFTL--------TSEDKFIVLASDGVWEFIDNEEVVKIVSPF---------HDKQDPQAACDALVKESNQRW-RAEEEVIDDTTVIVVFL 411          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: OMJ93583.1 (hypothetical protein SteCoe_3420 [Stentor coeruleus])

HSP 1 Score: 99.0 bits (245), Expect = 5.500e-17
Identity = 101/403 (25.06%), Postives = 152/403 (37.72%), Query Frame = 0
Query:  209 SSHP-VSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLPAFRLMQNDLVMCPL------LDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQV-GYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQV 604
            ++HP   ++ V DGHG  G  VS  ++Q LP  L Q         + + + +  C        LD+  SGST ++V+             +G  L   N+GDSR ++GR+ M                                                                     ++ +S S ++  +I L+ DHKPD  DE  RI   GG+V  Y+     PA                                          GPAR+W     D  GLAMSRS GD    + G   +PE++E R+        V ED F+++ SDGV++ + N+E V++V  +  +          D +    A+VR A KRWKR   ++IDDIT + + L V
Sbjct:  153 ANHPDAYLFGVCDGHGFYGGEVSGFIKQRLPALLAQDPEILSNPRKALTSCIHRCNSELSQINLDIKFSGSTLILVLI------------KGKTLYCANVGDSRALMGRQIMD--------------------------------------------------------------------STDKSISGKKWMSIALSRDHKPDSKDESERIYKSGGRVEAYQDENGNPA------------------------------------------GPARVWLK-NQDLPGLAMSRSMGDGVASSVGVICDPEILEIRL--------VPEDKFIMIGSDGVFEFISNEELVRIVVPYYRIQ---------DCEGTCDAIVREANKRWKR-EEEVIDDITAVCIFLDV 414          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: ETO13752.1 (hypothetical protein RFI_23618 [Reticulomyxa filosa])

HSP 1 Score: 98.6 bits (244), Expect = 7.200e-17
Identity = 104/414 (25.12%), Postives = 156/414 (37.68%), Query Frame = 0
Query:  215 IYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLPAFRLM--------------QNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHH--TNNIHINSGRSSSNRRIYAIP---------LTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVG-HFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQ 603
            ++ V DGHGE GH VSQ V + LP  ++ T+F   P FR+               Q DL +C   D   SG+T V  +  N             ++   NLGDSR VL R+K                                                                  + N    +  +++   I  IP         L+ DHKPD  +E++RI + GG+V   Q +                                            +LGP+R+W T   D  GLAMSRS GD   H  G SSE E+  +R+       +   D+F+I A+DG+W+ + N +A  +V  HF ++  G            A+AL ++A K+W++    ++DDIT I+  +Q
Sbjct:   62 LFGVCDGHGEYGHRVSQYVAKKLPKNILNTEFQAKPMFRMQLKKKSFYFGNFSFKQPDL-LCSKNDY--SGTTLVFSLFVN------------DVIYTANLGDSRAVLLRQKNKTHNASIKGNNSNKNTLCQIETKLMSPKNNNCADIALQCFFCGKKGKKNLNYHLKKNKVNLTSPISKNEDAQTKWNAAKSPIADIPFPTNCQVIALSRDHKPDIEEEMKRIVSHGGRVKPLQGL------------------------------------------DDSLGPSRVWLT-DIDIPGLAMSRSLGDDIAHTVGVSSEVEISVHRI-------DSTNDLFIIYATDGIWEFISNAQATAIVNEHFPNLRAG------------AMALAKLAIKKWRK-EEDVVDDITAIIYKIQ 397          
The following BLAST results are available for this feature:
BLAST of NO09G03300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN78332.12.500e-4132.11Protein phosphatase 2C containing protein [Ectocar... [more]
EWM27477.13.100e-3652.76protein phosphatase 2c ptc1 [Nannochloropsis gadit... [more]
BAK02837.12.700e-1924.73predicted protein [Hordeum vulgare subsp. vulgare][more]
OMJ88401.12.900e-1826.38hypothetical protein SteCoe_9724 [Stentor coeruleu... [more]
EJY79945.13.800e-1831.05Protein phosphatase 2C containing protein (macronu... [more]
XP_001456670.13.200e-1724.55hypothetical protein [Paramecium tetraurelia strai... [more]
XP_013906755.13.200e-1725.80hypothetical protein MNEG_0205 [Monoraphidium negl... [more]
CEM13721.13.200e-1726.46unnamed protein product [Vitrella brassicaformis C... [more]
OMJ93583.15.500e-1725.06hypothetical protein SteCoe_3420 [Stentor coeruleu... [more]
ETO13752.17.200e-1725.12hypothetical protein RFI_23618 [Reticulomyxa filos... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03300.1NO09G03300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527976gene_4215Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03300.1NO09G03300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03300 ID=NO09G03300|Name=NO09G03300|organism=Nannochloropsis oceanica|type=gene|length=1863bp
ATGACGGAGGGAGGAAAGGTGGTGGAAGAGATAGACGAGAAAATGGATGA
GGACAGGCAGACTGATAGGTCAGGCATTGATAATGAGGAACAACAGCAAC
ACCATCAGCAGCAGCACCAGCAGCAGCACCAGCAGCAGCAGCAACACCAG
CAGCAGCAGCATTATCCCTACGTAGCGTCATCGCAACAGCACATCAGCAG
CAGTACAAGCACCACCGACACAACCAGCAGCACGAGTATCACAGAAGGGA
TGGCTCACCATAAAATGGGCCACGGATCCAAGCGCCTGGACATATCCTGG
CAAGCTGCTGCCCGGCTAATCGCTCCTGGCCCTACCCCTCGTGTCCACGT
CCGGGGCTCTCGTGGAGCTCACTCCATCTCCATGGGGAGTGTCGATTTGC
TCGCCCGCCCTCTCTTCACACCGAGATCGGCCTTTCTCCAGCACGTACAC
GACCCGGAGGATTGCTACTCCCTCTCGGGATCAGTGAGTGGGATGTGCAC
TGCTCAAGGGCTCAAGTCATCACATGCCAACTGGATCAACCAAGATAATT
TCATCCTCCTCGACGCAGAGCAGCAGCAGCAGACTTCGCACTCTGTTTCC
TTGCCTTCTTCGTCGTTGTTGCCGTCTTCCCATCCCGTGTCAATTTATGC
AGTTTTGGACGGGCACGGCGAGCAGGGGCATCTGGTCAGCCAGCGCGTGA
GGCAGCACCTCCCGCATTATCTCGTCCAGACACAGTTTGACCCCCTTCCG
GCGTTTCGATTGATGCAGAACGACCTGGTCATGTGTCCCTTACTCGACGT
GGCGTGCTCTGGGTCCACGTGCGTGATGGTCATAGCGCGCAACGTGGAGG
GAGAGGGGAAGGGAGGGAGTGAGAGAGGGATGATATTGACAGTGGTAAAT
TTGGGGGACTCCCGGTGTGTGTTGGGAAGAAGAAAGATGACAGATTGGCG
GCGGCAGCAGCAGCAGCAGCAGCAGCAGCCTTGGGGACAGAATGAGGGAG
AGGGGCAGGATCAGAAGCAGCAAGAGGAGAAGCGAGAGGGGAAAGAGCAG
TCAGATGAAAGCCTCGTCAGTTATCACCTTCAATCATCATCCTCTCCCTC
TCCCTCCGCCTCTCCCTACGACCACCACACCAACAATATTCATATCAACA
GCGGCAGGAGTAGCAGTAATAGGCGCATCTACGCCATCCCCCTCACCAAC
GATCATAAGCCCGACCGTCCAGATGAACTCCGCCGAATTGCCGCCATAGG
TGGTCAAGTCGGATATCGTCAATACATCTCATACCCCGCTATCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTCCTCTTCCTCCACCTCC
TCCTCCTCCTCCTTCAACCATAATCGCTCCTCCACGCACCCTCTTCCCAC
TCCTTCCATTACCTTGGGGCCGGCGCGGATATGGTACACATGGCGAGGGG
ATCGGAACGGGCTGGCGATGAGTCGCTCCTTCGGGGACAGCGCCGTGCAC
GCGGCCGGTGGCAGTAGCGAGCCAGAGGTGGTGGAATATCGAGTGAGGGA
AAGAGGGAGGGATGGCGAGGTAGAGGAAGATATGTTCTTGATCTTGGCGA
GCGACGGGGTGTGGGATGTGGTTGACAATCAGGAGGCTGTTAAGGTAGTG
GGGCACTTTATCAGTGTATCGACGGGAGGGAGGGAGGGAGGGGAGTGGGA
TGCAAAGGAGGCGGCGATAGCTTTGGTGAGAATTGCGAGGAAACGGTGGA
AGAGGGTGTCGCCGCAAATGATCGACGATATCACTTGTATCGTTGTAAAC
CTCCAAGTAAAGGATAAAAACGAGGAAGGGGAGGGGAGGAGATTCATAGG
TAGCAGAGAATGA
back to top

protein sequence of NO09G03300.1

>NO09G03300.1-protein ID=NO09G03300.1-protein|Name=NO09G03300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=621bp
MTEGGKVVEEIDEKMDEDRQTDRSGIDNEEQQQHHQQQHQQQHQQQQQHQ
QQQHYPYVASSQQHISSSTSTTDTTSSTSITEGMAHHKMGHGSKRLDISW
QAAARLIAPGPTPRVHVRGSRGAHSISMGSVDLLARPLFTPRSAFLQHVH
DPEDCYSLSGSVSGMCTAQGLKSSHANWINQDNFILLDAEQQQQTSHSVS
LPSSSLLPSSHPVSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLP
AFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVN
LGDSRCVLGRRKMTDWRRQQQQQQQQPWGQNEGEGQDQKQQEEKREGKEQ
SDESLVSYHLQSSSSPSPSASPYDHHTNNIHINSGRSSSNRRIYAIPLTN
DHKPDRPDELRRIAAIGGQVGYRQYISYPAISSSSSSSSSSSSTSSSSTS
SSSSFNHNRSSTHPLPTPSITLGPARIWYTWRGDRNGLAMSRSFGDSAVH
AAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVV
GHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVN
LQVKDKNEEGEGRRFIGSRE*
back to top
Synonyms
Publications