NO09G03110, NO09G03110 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G03110
Unique Name	NO09G03110
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1464
Alignment location	chr9:907157..908620 +

Link to JBrowse

Properties


Property Name	Value
Description	Ammonium transporter

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:907157..908620 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008519	ammonium transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015696	ammonium transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR024041	NH4_transpt_AmtB-like_dom

Homology

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: EWM27494.1 (ammonium transporter [Nannochloropsis gaditana])

HSP 1 Score: 840.9 bits (2171), Expect = 2.000e-240
Identity = 426/489 (87.12%), Postives = 455/489 (93.05%), Query Frame = 0

Query:    3 DKITKKRVITASVLSVIFALCIAMTVFDS-KDGSFIMADDDASVIAYNDAYPTDEEPKLLPGDIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKDVKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETIILEDE---GMEKPVDDLDASSRIELGSM 488
            DKI K+R+IT SVLS++ AL IAMT FD+ K G++IMADDD S+I YN A PT+EEP+LLPGDIAWML +TALVLLMTPGLAFFYGGMVRAKNVISTLL SF+AMGVIT+LWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFS TIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFI+LFSLF+YCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRK+V KMQPANIPFVMLGTALLWFGWFGFNAGSALAA P+AVQAFLTTNTATAAAMLTWVFVDH+RGSKSTAMGACVGAVVGLVVITPGAGFVT+GG+ACMG+IGA ISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCF T + N D  DGLFYGD T FWHHLVALVC+IP+IMGMSF+CYQITN IYPLR GEKSEKLGLDMSQHKE+I++ DE    + KP DDLDASSRIELGSM
Sbjct:   56 DKIVKRRIITGSVLSLLLALSIAMTCFDAKKGGAYIMADDDPSIINYNAALPTEEEPQLLPGDIAWMLAATALVLLMTPGLAFFYGGMVRAKNVISTLLMSFVAMGVITMLWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSNTIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIVLFSLFVYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKNVGKMQPANIPFVMLGTALLWFGWFGFNAGSALAADPVAVQAFLTTNTATAAAMLTWVFVDHLRGSKSTAMGACVGAVVGLVVITPGAGFVTVGGAACMGMIGAFISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFATVSANADGADGLFYGDATLFWHHLVALVCLIPYIMGMSFLCYQITNLIYPLRVGEKSEKLGLDMSQHKESIMVHDEEEDDVVKPADDLDASSRIELGSM 544

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: XP_005855591.1 (ammonium transporter [Nannochloropsis gaditana CCMP526] >EKU20768.1 ammonium transporter [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 755.7 bits (1950), Expect = 8.600e-215
Identity = 381/423 (90.07%), Postives = 400/423 (94.56%), Query Frame = 0

Query:   68 MLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKDVKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETIILEDE---GMEKPVDDLDASSRIELGSM 488
            ML +TALVLLMTPGLAFFYGGMVRAKNVISTLL SF+AMGVIT+LWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFS TIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFI+LFSLF+YCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRK+V KMQPANIPFVMLGTALLWFGWFGFNAGSALAA P+AVQAFLTTNTATAAAMLTWVFVDH+RGSKSTAMGACVGAVVGLVVITPGAGFVT+GG+ACMG+IGA ISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCF T + N D  DGLFYGD T FWHHLVALVC+IP+IMGMSF+CYQITN IYPLR GEKSEKLGLDMSQHKE+I++ DE    + KP DDLDASSRIELGSM
Sbjct:    1 MLAATALVLLMTPGLAFFYGGMVRAKNVISTLLMSFVAMGVITMLWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSNTIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIVLFSLFVYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKNVGKMQPANIPFVMLGTALLWFGWFGFNAGSALAADPVAVQAFLTTNTATAAAMLTWVFVDHLRGSKSTAMGACVGAVVGLVVITPGAGFVTVGGAACMGMIGAFISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFATVSANADGADGLFYGDATLFWHHLVALVCLIPYIMGMSFLCYQITNLIYPLRVGEKSEKLGLDMSQHKESIMVHDEEEDDVVKPADDLDASSRIELGSM 423

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: WP_012499246.1 (ammonium transporter [Chloroherpeton thalassium] >ACF13162.1 ammonium transporter [Chloroherpeton thalassium ATCC 35110])

HSP 1 Score: 499.2 bits (1284), Expect = 1.400e-137
Identity = 252/411 (61.31%), Postives = 325/411 (79.08%), Query Frame = 0

Query:   60 LLPGDIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKDVKKMQ---PANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETIILEDE 468
            ++PGD+AWMLT+TALVLLMTPGL+FFYGGMV  +N+IST+LQSF+AMGV++ILW VVGFSL+FGDS+ G++GNP T+  +N+V  A   + S TIPLAL++LFQLKFAIITPALI+G+ AERVRF+SY++FI L+ L IY PLAH TWHP+G L + G+LDFAGGTVVHMS+G+AAL G+++LG RK   K +   PANIPFV+LGT +LWFGWFGFNAGSALAAS +A  AFL TNTA+A+AML W+F+D +RG K +A+GA V AVVGLV ITP AGFV++G S  +G + ++ISN +A Y+  K+ +DDTLDV+PCHG+GG VGM+LT+ F           GL +GDPTTF HHL+ALV +  F  G S++ Y+IT+ I PLR  E+ E LGLD+SQH E++  +D+
Sbjct:   34 IVPGDVAWMLTATALVLLMTPGLSFFYGGMVGKRNIISTMLQSFVAMGVVSILWVVVGFSLSFGDSIGGFIGNPFTYFMFNHVDGATHPDLSPTIPLALFALFQLKFAIITPALITGSFAERVRFSSYLLFITLWVLLIYTPLAHWTWHPEGFLRQMGVLDFAGGTVVHMSAGFAALAGAMVLGRRKSHIKSEPHTPANIPFVLLGTGMLWFGWFGFNAGSALAASDVATVAFLNTNTASASAMLAWMFLDGVRGRKISALGAAVAAVVGLVAITPAAGFVSVGASIFIGAVASIISN-LAVYWKNKSTLDDTLDVFPCHGMGGIVGMILTAVFANEV-------GLIHGDPTTFLHHLLALVIVGVFTFGGSYLLYKITDMIIPLRVTEEQEFLGLDLSQHGESLSEDDQ 436

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: WP_090257418.1 (ammonium transporter [Fabibacter pacificus] >SEV97418.1 ammonium transporter [Fabibacter pacificus])

HSP 1 Score: 493.4 bits (1269), Expect = 7.900e-136
Identity = 248/416 (59.62%), Postives = 316/416 (75.96%), Query Frame = 0

Query:   57 EPKLLPGDIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKD--VKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETIILEDEGME 471
            +P L  GD AWML +T LVLLMTPGL+FFYGGMV  K+VIST+LQSF+ MG+IT++W V GFSLAFGDS+ G++G+P TF F+  VGAA  +  + TIP  L++LFQ+KFAIITPALI+G+ AERVRF+S+++FIILFS+ IY PLAHMTWHP+G L K G+LDFAGGTVVHMS+G+AA+  +IILG RK+      QPAN+P+V+LGT LLWFGWFGFNAGSAL A+  A  AF TT  A+AAAML WVF D + G K + +GA +GAVVGLV ITP AGFVTIG S  +G+ GA++SN+V +Y N K  IDDTLDV+PCHG+GG VGM+LT  F           GL YGDP+TF  H+ A+  +  F  G+S++ +++TN I P+R  E++E LGLD+SQH E+I++ED   E
Sbjct:   32 DPNLDGGDTAWMLAATGLVLLMTPGLSFFYGGMVSKKSVISTMLQSFICMGIITLVWVVCGFSLAFGDSIGGFIGDPTTFAFFKGVGAATQSELAPTIPFVLFALFQMKFAIITPALITGSFAERVRFSSFLLFIILFSIIIYSPLAHMTWHPEGFLRKWGVLDFAGGTVVHMSAGFAAIAAAIILGRRKNHGTAVHQPANVPYVLLGTGLLWFGWFGFNAGSALGANGDAALAFATTTVASAAAMLAWVFYDALMGRKISGLGASIGAVVGLVAITPAAGFVTIGQSVFIGVAGAIVSNIVVYYKN-KTGIDDTLDVFPCHGVGGIVGMILTGVFAKDV-------GLIYGDPSTFLKHMAAIFLVGGFTFGLSYLLFKVTNAIIPMRVTEQAEDLGLDISQHNESIVVEDIAAE 439

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: KYG82570.1 (ammonia channel protein [Roseivirga echinicomitans])

HSP 1 Score: 490.7 bits (1262), Expect = 5.100e-135
Identity = 246/401 (61.35%), Postives = 304/401 (75.81%), Query Frame = 0

Query:   64 DIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKD--VKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETI 463
            D AWML +T LVLLMTPGL+FFYGGMV  KNVIST+LQSF+ MGVIT++W V GFSLAFGDS+ G  GNP TF F+  VG A   + + TIP  L++LFQ+KFAIITPALI+G+ AERVRF+S+++FIILFS+FIY PLAHMTWHPDG L K G+LDFAGGTVVHMS+G+AA+  +IILG RKD    + QPAN+P+V+LGT LLWFGWFGFNAGSAL A+  A  AF TT  A+AAAML WVF D + G K + MGA +GAVVGLV ITP AGFVT+G S  +G+ GA+ISN+V +Y N K  IDDTLDV+PCHG+GG VGM+LT+ F           GL YG+ TTF+ H+  +  +  F  GMS+V +++TN I P+R   + E+ GLD+SQH ET+
Sbjct:   39 DTAWMLAATGLVLLMTPGLSFFYGGMVNKKNVISTMLQSFICMGVITLVWVVFGFSLAFGDSIGGIFGNPTTFAFFKGVGGATQVDLAPTIPFILFALFQMKFAIITPALITGSFAERVRFSSFLLFIILFSVFIYAPLAHMTWHPDGFLRKWGVLDFAGGTVVHMSAGFAAIAAAIILGKRKDHGTSEHQPANVPYVLLGTGLLWFGWFGFNAGSALGANASAAMAFATTTVASAAAMLAWVFYDALMGRKISGMGASIGAVVGLVAITPAAGFVTVGQSVFIGVAGAIISNIVVYYKN-KTGIDDTLDVFPCHGVGGIVGMILTAVFAKDV-------GLIYGETTTFFRHIATIFMVGTFTFGMSYVLFKLTNLIIPMRVSIEDEERGLDLSQHGETL 431

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: WP_089082102.1 (ammonium transporter [Roseivirga echinicomitans])

HSP 1 Score: 490.7 bits (1262), Expect = 5.100e-135
Identity = 246/401 (61.35%), Postives = 304/401 (75.81%), Query Frame = 0

Query:   64 DIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKD--VKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETI 463
            D AWML +T LVLLMTPGL+FFYGGMV  KNVIST+LQSF+ MGVIT++W V GFSLAFGDS+ G  GNP TF F+  VG A   + + TIP  L++LFQ+KFAIITPALI+G+ AERVRF+S+++FIILFS+FIY PLAHMTWHPDG L K G+LDFAGGTVVHMS+G+AA+  +IILG RKD    + QPAN+P+V+LGT LLWFGWFGFNAGSAL A+  A  AF TT  A+AAAML WVF D + G K + MGA +GAVVGLV ITP AGFVT+G S  +G+ GA+ISN+V +Y N K  IDDTLDV+PCHG+GG VGM+LT+ F           GL YG+ TTF+ H+  +  +  F  GMS+V +++TN I P+R   + E+ GLD+SQH ET+
Sbjct:   19 DTAWMLAATGLVLLMTPGLSFFYGGMVNKKNVISTMLQSFICMGVITLVWVVFGFSLAFGDSIGGIFGNPTTFAFFKGVGGATQVDLAPTIPFILFALFQMKFAIITPALITGSFAERVRFSSFLLFIILFSVFIYAPLAHMTWHPDGFLRKWGVLDFAGGTVVHMSAGFAAIAAAIILGKRKDHGTSEHQPANVPYVLLGTGLLWFGWFGFNAGSALGANASAAMAFATTTVASAAAMLAWVFYDALMGRKISGMGASIGAVVGLVAITPAAGFVTVGQSVFIGVAGAIISNIVVYYKN-KTGIDDTLDVFPCHGVGGIVGMILTAVFAKDV-------GLIYGETTTFFRHIATIFMVGTFTFGMSYVLFKLTNLIIPMRVSIEDEERGLDLSQHGETL 411

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: WP_069842908.1 (ammonium transporter [Fabibacter sp. 4D4] >OEK02455.1 ammonia channel protein [Fabibacter sp. 4D4])

HSP 1 Score: 490.0 bits (1260), Expect = 8.800e-135
Identity = 247/407 (60.69%), Postives = 310/407 (76.17%), Query Frame = 0

Query:   57 EPKLLPGDIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKDVKKM-QPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETI 463
            +P +   D AWML +TALVLLMTPGL+FFYGGMV  KNVIST+LQSF+ MGVIT++W V GFS AFGDS+ G++G+P TF F+  VG+A   + + TIP  L++LFQ+KFAIITPALI+G+ AERVRF+S+I+FIILFS+ +Y PLAHMTWHPDG L K G+LDFAGGTVVHMS+G+AA+  +IILG RK+   + +PAN+PFV+LGT LLWFGWFGFNAGSAL A+  A  AF TT  A+AAAML WVF D + G K + +GA +GAVVGLV ITP AGFVTIG S  +G+ GA+ISN+V +Y N K  IDDTLDV+PCHG+GG  GM+LT  F           GL YGDPTTF  H+ A+  +  F  G S++ ++ITNFI P+R  E SE++GLD+SQH E++
Sbjct:   32 DPNISGADTAWMLAATALVLLMTPGLSFFYGGMVSRKNVISTMLQSFICMGVITLVWVVGGFSFAFGDSIGGFIGDPRTFAFFKGVGSATQADLAPTIPFILFALFQMKFAIITPALITGSFAERVRFSSFILFIILFSIVVYSPLAHMTWHPDGFLRKWGVLDFAGGTVVHMSAGFAAIAAAIILGKRKNHGAVHKPANVPFVLLGTGLLWFGWFGFNAGSALGANGDAAMAFATTTVASAAAMLAWVFYDALMGRKISGLGASIGAVVGLVAITPAAGFVTIGQSVFIGVAGAIISNIVVYYKN-KTGIDDTLDVFPCHGVGGITGMILTGVFAKDV-------GLIYGDPTTFLRHMAAIFLVGGFTFGASYLLFKITNFIIPMRVNEVSEEVGLDISQHGESL 430

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: PIQ50021.1 (ammonia channel protein [Cytophagales bacterium CG12_big_fil_rev_8_21_14_0_65_40_12] >PIW05931.1 ammonia channel protein [Cytophagales bacterium CG17_big_fil_post_rev_8_21_14_2_50_40_13])

HSP 1 Score: 487.6 bits (1254), Expect = 4.400e-134
Identity = 244/401 (60.85%), Postives = 306/401 (76.31%), Query Frame = 0

Query:   64 DIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKD-VKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKETII 464
            D AWML +T LVLLMTPGL+FFYGGMV   +VIST+LQSF+ MG+IT+LW + GFSLAFGDS+ G +GNP+T+ F+  VG A   + + TIP  L++LFQ+KFAIITPALI+G+ AERVRF+S+++FI+LFSL +Y PLAHMTWHP+G L K G+LDFAGGTVVHMS+G+AA+  +IILG RK+     QPAN+PFV+LGT LLWFGWFGFNAGSAL A+  A  AF TT  A+AAAML WVF D + G K + MGA +GAVVGLV ITP AGFVTIG S  +G+ GA+ISN+V +Y N K  IDDTLDV+PCHG+GG VGM+LT  F           GL YGDPTTF  HL A+  +  F  GMS++ +++TN I P+R  E +E++GLD+SQH E+I+
Sbjct:   39 DTAWMLAATGLVLLMTPGLSFFYGGMVNKTSVISTMLQSFICMGIITLLWVICGFSLAFGDSIGGIIGNPSTYFFFKGVGGATQADLAPTIPFVLFALFQMKFAIITPALITGSFAERVRFSSFLVFILLFSLLVYAPLAHMTWHPEGFLRKWGVLDFAGGTVVHMSAGFAAIAAAIILGKRKNHGTNHQPANVPFVLLGTGLLWFGWFGFNAGSALGANESAALAFATTTVASAAAMLAWVFYDALMGRKISGMGASIGAVVGLVAITPAAGFVTIGQSIFIGVAGAIISNIVVYYKN-KTGIDDTLDVFPCHGVGGIVGMILTGVFAKDV-------GLIYGDPTTFLRHLAAIFLVGGFTFGMSYLLFKLTNLIIPMRVSEAAEEMGLDLSQHGESIL 431

[Close]

BLAST of NO09G03110 vs. NCBI_GenBank
Match: WP_106526761.1 (ammonium transporter [Chitinophaga niastensis] >PSL49531.1 ammonium transporter [Chitinophaga niastensis])

HSP 1 Score: 483.0 bits (1242), Expect = 1.100e-132
Identity = 246/421 (58.43%), Postives = 318/421 (75.53%), Query Frame = 0

Query:   64 DIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKD---VKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKET-----IILEDEGMEKPVDDL 477
            DIAW+L +++LV LMTPGL+FFYGGMV  KNVIST++QSF+A G+I+I+W VVGFSLAFG S  G +G+P +F  + NVG+ A  + + TIPL L++LFQ+KFAIITPAL+ GA+AER+RFTSY++F++LFSL +Y P+AH TWHPDG+L K G+LDFAGGTVVH+S+G AAL G+++L  RKD    K++QPANIPFV+LGT LLWFGWFGFNAGSAL+A+ LAV AF TTNTATAAA L+WVF D IRG K +A+G C+GAVVGLV ITP AGFV I  S  +G I A+ISNV  H+  +K +IDDTLDV+PCHGLGG VGM+LT  F T  VN    DG FYG+   F + ++ L+ ++ +   +S+  +++ N I+PLR  E  E LGLD++QH E      I + D G  K  ++L
Sbjct:   41 DIAWILVASSLVFLMTPGLSFFYGGMVNKKNVISTMMQSFIATGLISIVWIVVGFSLAFGKSYHGIIGDPRSFFMFQNVGSGAPWSLAPTIPLLLFALFQMKFAIITPALVVGAVAERIRFTSYVLFMVLFSLLVYAPIAHWTWHPDGILFKLGVLDFAGGTVVHISAGCAALAGALVLKRRKDHIEKKELQPANIPFVLLGTGLLWFGWFGFNAGSALSANALAVSAFATTNTATAAAGLSWVFFDVIRGRKPSALGFCIGAVVGLVAITPAAGFVAIPQSVFIGFIAAIISNVAVHW-KSKTSIDDTLDVFPCHGLGGMVGMLLTGIFATKAVNAGGADGWFYGNFDLFKNQVLGLLLVVSYSFTVSYGIFKLINLIHPLRVSEDEESLGLDVTQHNENYHPILISVSDNGTLKEEEEL 460

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BLAST of NO09G03110 vs. NCBI_GenBank
Match: WP_108686457.1 (ammonium transporter [Chitinophaga sp. LY-1] >PUZ29820.1 ammonia channel protein [Chitinophaga sp. LY-1])

HSP 1 Score: 479.9 bits (1234), Expect = 9.100e-132
Identity = 236/400 (59.00%), Postives = 309/400 (77.25%), Query Frame = 0

Query:   64 DIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLLQSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNFSATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYCPLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKD---VKKMQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAMLTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGAVISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSPDGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEKLGLDMSQHKE 461
            D+AW+L +TALV LMTPGL+FFYGGMV  KNVIST++QSF+A G+++++W  VGFS+AFGDSL G +GNP T+ F++NV +A     +ATIP  L++LFQ+KFA+ITPAL+ GA+AER+RFTSYI+F++LFSL +Y P+AH TWHP G L K G+LDFAGGTVVH+S+G AAL G+++L  RKD    K+++PANIPFV++GT LLWFGWFGFNAGSAL A+ L+V AF TTNTA AAA L+WVF D IRG K++A+G C+GAVVGLV ITP AG+V I  S  +G I A+ISN+  H+  TK++IDDTLDV+PCHG+GG VGM+LT  F T  +NP   DG FYG+P  F   L  L+ ++ +   +S+  +++ N I+PLR  E+ E LGLD +QH E
Sbjct:   42 DVAWILVATALVFLMTPGLSFFYGGMVNRKNVISTMVQSFIAAGLVSVIWVAVGFSMAFGDSLGGVIGNPGTYFFFHNVPSAEPFANAATIPFLLFALFQMKFAVITPALVVGAVAERIRFTSYILFMVLFSLLVYAPIAHWTWHPSGFLYKMGVLDFAGGTVVHISAGCAALAGALVLKRRKDHIEKKELEPANIPFVLIGTGLLWFGWFGFNAGSALGANALSVSAFATTNTAAAAAGLSWVFFDVIRGRKASALGFCIGAVVGLVAITPAAGYVGIPQSMFIGFIAAIISNMAVHW-KTKSSIDDTLDVFPCHGVGGMVGMLLTGIFATKVINPAGNDGWFYGNPDLFVKQLTGLLIVVAYSFTVSYGIFKLINLIHPLRVSEEEEILGLDATQHGE 440

The following BLAST results are available for this feature:

BLAST of NO09G03110 vs. NCBI_GenBank

BLAST of NO09G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27494.1	2.000e-240	87.12	ammonium transporter [Nannochloropsis gaditana]	[more]
XP_005855591.1	8.600e-215	90.07	ammonium transporter [Nannochloropsis gaditana CCM...	[more]
WP_012499246.1	1.400e-137	61.31	ammonium transporter [Chloroherpeton thalassium] >...	[more]
WP_090257418.1	7.900e-136	59.62	ammonium transporter [Fabibacter pacificus] >SEV97...	[more]
KYG82570.1	5.100e-135	61.35	ammonia channel protein [Roseivirga echinicomitans...	[more]
WP_089082102.1	5.100e-135	61.35	ammonium transporter [Roseivirga echinicomitans]	[more]
WP_069842908.1	8.800e-135	60.69	ammonium transporter [Fabibacter sp. 4D4] >OEK0245...	[more]
PIQ50021.1	4.400e-134	60.85	ammonia channel protein [Cytophagales bacterium CG...	[more]
WP_106526761.1	1.100e-132	58.43	ammonium transporter [Chitinophaga niastensis] >PS...	[more]
WP_108686457.1	9.100e-132	59.00	ammonium transporter [Chitinophaga sp. LY-1] >PUZ2...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL120	nonsL120	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR021	ncniR021	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR127	ngnoR127	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010846	NSK010846	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO09G03110.1	NO09G03110.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|588441	gene_4233	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100099g15	gene3065	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO09G03110.1	NO09G03110.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO09G03110 ID=NO09G03110|Name=NO09G03110|organism=Nannochloropsis oceanica|type=gene|length=1464bp
ATGATCGACAAGATAACCAAGAAGCGGGTCATTACCGCCTCCGTGCTGAG
CGTCATCTTTGCCCTGTGCATCGCCATGACGGTCTTCGACAGCAAGGACG
GAAGCTTCATTATGGCGGATGACGACGCTTCCGTGATTGCCTACAATGAT
GCCTACCCGACTGACGAGGAGCCTAAGCTCCTGCCTGGTGACATAGCGTG
GATGCTCACCTCCACTGCTCTTGTCTTGCTCATGACTCCCGGCCTGGCCT
TCTTCTACGGCGGCATGGTGCGTGCCAAGAACGTGATTTCCACCTTGCTC
CAGTCGTTTATGGCCATGGGTGTTATCACGATCCTCTGGACTGTCGTCGG
TTTCTCCCTGGCCTTTGGTGACTCCCTCTCGGGCTACATGGGCAACCCCG
CCACCTTCCCCTTCTATAACAATGTGGGCGCAGCCGCCGATACTAACTTC
TCCGCCACGATTCCCCTGGCGCTTTACTCCCTCTTTCAGCTCAAGTTTGC
TATTATTACCCCTGCTTTGATTTCGGGCGCCATTGCTGAGCGTGTCCGCT
TCACCTCTTACATCATCTTCATTATCCTCTTCTCCCTCTTCATCTACTGC
CCTCTGGCCCACATGACCTGGCACCCGGACGGTCTCCTTGCCAAGGCCGG
CATCCTGGATTTCGCCGGCGGCACCGTCGTACACATGTCCTCGGGTTACG
CGGCATTGGTTGGCTCGATCATCCTGGGGCCCCGTAAGGACGTGAAGAAG
ATGCAGCCCGCCAACATCCCCTTCGTCATGCTCGGAACTGCCCTCCTGTG
GTTTGGATGGTTTGGTTTCAACGCCGGCTCGGCCCTTGCGGCGTCTCCGT
TAGCAGTGCAGGCTTTCTTGACCACCAACACGGCTACAGCGGCTGCCATG
CTTACGTGGGTTTTCGTGGACCACATCCGTGGGAGCAAGTCCACCGCCAT
GGGCGCATGTGTTGGGGCTGTGGTAGGGCTCGTCGTGATCACACCCGGCG
CCGGGTTCGTCACCATCGGTGGCTCGGCGTGCATGGGCATTATCGGCGCT
GTGATTTCCAACGTCGTGGCCCATTACTTTAACACCAAGGCGAACATTGA
TGATACGTTGGACGTGTGGCCTTGCCACGGCCTGGGCGGGACTGTTGGCA
TGGTCCTCACCTCGTGCTTCTGCACCAGCACCGTTAACCCAGACTCTCCG
GACGGCTTGTTCTACGGAGACCCCACCACGTTCTGGCACCATCTAGTGGC
GCTTGTGTGCATCATCCCTTTCATCATGGGCATGTCCTTTGTCTGCTACC
AGATCACGAACTTCATCTACCCTCTGCGTTGTGGTGAGAAATCCGAAAAG
CTCGGCCTGGACATGTCGCAGCACAAGGAGACCATCATCCTTGAGGATGA
GGGCATGGAGAAGCCCGTCGACGACTTGGATGCGTCCAGCCGCATTGAGC
TTGGCTCCATGTAA

protein sequence of NO09G03110.1

>NO09G03110.1-protein ID=NO09G03110.1-protein|Name=NO09G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MIDKITKKRVITASVLSVIFALCIAMTVFDSKDGSFIMADDDASVIAYND
AYPTDEEPKLLPGDIAWMLTSTALVLLMTPGLAFFYGGMVRAKNVISTLL
QSFMAMGVITILWTVVGFSLAFGDSLSGYMGNPATFPFYNNVGAAADTNF
SATIPLALYSLFQLKFAIITPALISGAIAERVRFTSYIIFIILFSLFIYC
PLAHMTWHPDGLLAKAGILDFAGGTVVHMSSGYAALVGSIILGPRKDVKK
MQPANIPFVMLGTALLWFGWFGFNAGSALAASPLAVQAFLTTNTATAAAM
LTWVFVDHIRGSKSTAMGACVGAVVGLVVITPGAGFVTIGGSACMGIIGA
VISNVVAHYFNTKANIDDTLDVWPCHGLGGTVGMVLTSCFCTSTVNPDSP
DGLFYGDPTTFWHHLVALVCIIPFIMGMSFVCYQITNFIYPLRCGEKSEK
LGLDMSQHKETIILEDEGMEKPVDDLDASSRIELGSM*

Synonyms

Publications