NO09G03100, NO09G03100 (gene) Nannochloropsis oceanica

Overview
NameNO09G03100
Unique NameNO09G03100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1818
Alignment locationchr9:905017..906834 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:905017..906834 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03100.1NO09G03100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03100.1NO09G03100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03100 ID=NO09G03100|Name=NO09G03100|organism=Nannochloropsis oceanica|type=gene|length=1818bp
ATGCACACGGTATGGCAATCGTGCCACCCAGGCACGCGATACAGGgtatg
tcatcaatgccttgagcaccgaggaagcggggcttgttgcttgtcgtgtg
gatgtgcggccccaacccatgcgaccacctcctgctggcgggaagcgagg
tgatgcagcgtcgacatcgtcaggacacacgcatccgagcggcaaacaca
caccccttacacagggggcgcagatatacaggcataattagccgtctcga
gctgtgcgtggttgtacagggtgaaaagggcggaaaggcggcgtatcaaa
gccacaaagtaggcacaaatcagcgcctcaccgcccaaccagcacacaca
agaagaaacaatgcctgtcctctgaattgatgaaggcattgtcgctcgaa
agaatgccagcacacaacgacgacgaaatctagtcgacaccatcccgacc
aaagtggtgtggagtcacaacaagagtaacaacacaaacaattgtaaaag
agccgagatgaggcttcgtaaataccgcgacgtcaaggtcgctcgccccc
gcaacggcagCTCTTCGAGAGTATTGGGGGCTTGTTCTGGAGGAAAAGTG
GGCCGAAGTCGACCAACCACTACTGGAGCAGCAAAAGCCCTCCCGACGgt
gagtgacgaagtttgtctgttttttgcgtcatagctccgtttggtcaggc
cttgtgaccgccgtgtcgaagcaggacgtaatgaaaatcttggaacgagt
gaaagcacgagcggcggggaaaagctgcgggagaggcgccgcgactcgtc
gctcgatttattatctttatcggtccttgtccctctcacgcgttcgtcac
actttcttcttgcatgtagtactcgtgtaatcttcaatgtttattctcag
cctgtctcttttcccattacgacatgctgacttccccacctctcttgttc
tcctctgccaatcttcgtagaaagcaattgcctcgccctcctcccatggc
cgcctacagaactttgtcacgtgcaggatgacgataaagccgtacttact
tcgctcttctggacctagGGCGAGGGTACAATGAAGAGCAAGAGCGAGAA
TTCGAGCAGGATGAGCAAGCCACACACCCTGGCCTACCGCCGGCTCGCTT
CTCCGTACGGCCCCCGTCGCGCAATGGCCCAAACTgtaagttgacgcgga
gggtacgaaagaaattctagttaagacaactgacttctgcgggctgagtc
gcgtgacgatgccacccacgcggagctagATATTTTTCTTCAGAAAAAGA
GGAAGCCGACAGAAGCCACGGATACCACCTCGCAGGAGAAAGACATCGAG
gtgcgtgcagtggtaatggggtggtagcacgttcctaaaagcccttcaat
tgctttctctcacactctgttgtcttcatgcgcagcacgcttacataact
ttgattgcgcgcagcacgcttacataactttgattgggttcatcttttga
agcactgctctttaaggtggaagatcttgatatcaccacccaccgctgca
atcacgaagggggcgaacttcattacgtttatgatgccttgaacgtttct
catttccaccaacaccaatctacgaggacatgaaggaatcaatcctgcct
tcaaaattatctgctgcaaccctacgtccttatctatagGCAGAGGATGC
CACAAAGATGGAAGGTGCTTCATATCGCGCCGACAGCACGTCGATCCCTT
TCACAACCTCTTCTACGTCGTCAAGGGGGCCAAGAGAAAGCGTCGTTGCT
GTGCGTAGTTGCTCGTGA
back to top

protein sequence of NO09G03100.1

>NO09G03100.1-protein ID=NO09G03100.1-protein|Name=NO09G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bp
MHTVWQSCHPGTRYRLFESIGGLFWRKSGPKSTNHYWSSKSPPDGRGYNE
EQEREFEQDEQATHPGLPPARFSVRPPSRNGPNYIFLQKKRKPTEATDTT
SQEKDIEAEDATKMEGASYRADSTSIPFTTSSTSSRGPRESVVAVRSCS*
back to top
Synonyms
Publications