NO09G03100.1, NO09G03100.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G03100.1
Unique NameNO09G03100.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length450
Alignment locationchr9:905017..906834 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:905017..906834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03100NO09G03100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G03100.1NO09G03100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G03100.1.cds1NO09G03100.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03100.1.cds2NO09G03100.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03100.1.cds3NO09G03100.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03100.1.cds4NO09G03100.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03100.1.cds5NO09G03100.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G03100.1 ID=NO09G03100.1|Name=NO09G03100.1|organism=Nannochloropsis oceanica|type=mRNA|length=450bp
ATGCACACGGTATGGCAATCGTGCCACCCAGGCACGCGATACAGGCTCTT
CGAGAGTATTGGGGGCTTGTTCTGGAGGAAAAGTGGGCCGAAGTCGACCA
ACCACTACTGGAGCAGCAAAAGCCCTCCCGACGGGCGAGGGTACAATGAA
GAGCAAGAGCGAGAATTCGAGCAGGATGAGCAAGCCACACACCCTGGCCT
ACCGCCGGCTCGCTTCTCCGTACGGCCCCCGTCGCGCAATGGCCCAAACT
ATATTTTTCTTCAGAAAAAGAGGAAGCCGACAGAAGCCACGGATACCACC
TCGCAGGAGAAAGACATCGAGGCAGAGGATGCCACAAAGATGGAAGGTGC
TTCATATCGCGCCGACAGCACGTCGATCCCTTTCACAACCTCTTCTACGT
CGTCAAGGGGGCCAAGAGAAAGCGTCGTTGCTGTGCGTAGTTGCTCGTGA
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protein sequence of NO09G03100.1

>NO09G03100.1-protein ID=NO09G03100.1-protein|Name=NO09G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bp
MHTVWQSCHPGTRYRLFESIGGLFWRKSGPKSTNHYWSSKSPPDGRGYNE
EQEREFEQDEQATHPGLPPARFSVRPPSRNGPNYIFLQKKRKPTEATDTT
SQEKDIEAEDATKMEGASYRADSTSIPFTTSSTSSRGPRESVVAVRSCS*
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mRNA from alignment at chr9:905017..906834-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G03100.1 ID=NO09G03100.1|Name=NO09G03100.1|organism=Nannochloropsis oceanica|type=mRNA|length=1818bp|location=Sequence derived from alignment at chr9:905017..906834- (Nannochloropsis oceanica)
ATGCACACGGTATGGCAATCGTGCCACCCAGGCACGCGATACAGGGTATG
TCATCAATGCCTTGAGCACCGAGGAAGCGGGGCTTGTTGCTTGTCGTGTG
GATGTGCGGCCCCAACCCATGCGACCACCTCCTGCTGGCGGGAAGCGAGG
TGATGCAGCGTCGACATCGTCAGGACACACGCATCCGAGCGGCAAACACA
CACCCCTTACACAGGGGGCGCAGATATACAGGCATAATTAGCCGTCTCGA
GCTGTGCGTGGTTGTACAGGGTGAAAAGGGCGGAAAGGCGGCGTATCAAA
GCCACAAAGTAGGCACAAATCAGCGCCTCACCGCCCAACCAGCACACACA
AGAAGAAACAATGCCTGTCCTCTGAATTGATGAAGGCATTGTCGCTCGAA
AGAATGCCAGCACACAACGACGACGAAATCTAGTCGACACCATCCCGACC
AAAGTGGTGTGGAGTCACAACAAGAGTAACAACACAAACAATTGTAAAAG
AGCCGAGATGAGGCTTCGTAAATACCGCGACGTCAAGGTCGCTCGCCCCC
GCAACGGCAGCTCTTCGAGAGTATTGGGGGCTTGTTCTGGAGGAAAAGTG
GGCCGAAGTCGACCAACCACTACTGGAGCAGCAAAAGCCCTCCCGACGGT
GAGTGACGAAGTTTGTCTGTTTTTTGCGTCATAGCTCCGTTTGGTCAGGC
CTTGTGACCGCCGTGTCGAAGCAGGACGTAATGAAAATCTTGGAACGAGT
GAAAGCACGAGCGGCGGGGAAAAGCTGCGGGAGAGGCGCCGCGACTCGTC
GCTCGATTTATTATCTTTATCGGTCCTTGTCCCTCTCACGCGTTCGTCAC
ACTTTCTTCTTGCATGTAGTACTCGTGTAATCTTCAATGTTTATTCTCAG
CCTGTCTCTTTTCCCATTACGACATGCTGACTTCCCCACCTCTCTTGTTC
TCCTCTGCCAATCTTCGTAGAAAGCAATTGCCTCGCCCTCCTCCCATGGC
CGCCTACAGAACTTTGTCACGTGCAGGATGACGATAAAGCCGTACTTACT
TCGCTCTTCTGGACCTAGGGCGAGGGTACAATGAAGAGCAAGAGCGAGAA
TTCGAGCAGGATGAGCAAGCCACACACCCTGGCCTACCGCCGGCTCGCTT
CTCCGTACGGCCCCCGTCGCGCAATGGCCCAAACTGTAAGTTGACGCGGA
GGGTACGAAAGAAATTCTAGTTAAGACAACTGACTTCTGCGGGCTGAGTC
GCGTGACGATGCCACCCACGCGGAGCTAGATATTTTTCTTCAGAAAAAGA
GGAAGCCGACAGAAGCCACGGATACCACCTCGCAGGAGAAAGACATCGAG
GTGCGTGCAGTGGTAATGGGGTGGTAGCACGTTCCTAAAAGCCCTTCAAT
TGCTTTCTCTCACACTCTGTTGTCTTCATGCGCAGCACGCTTACATAACT
TTGATTGCGCGCAGCACGCTTACATAACTTTGATTGGGTTCATCTTTTGA
AGCACTGCTCTTTAAGGTGGAAGATCTTGATATCACCACCCACCGCTGCA
ATCACGAAGGGGGCGAACTTCATTACGTTTATGATGCCTTGAACGTTTCT
CATTTCCACCAACACCAATCTACGAGGACATGAAGGAATCAATCCTGCCT
TCAAAATTATCTGCTGCAACCCTACGTCCTTATCTATAGGCAGAGGATGC
CACAAAGATGGAAGGTGCTTCATATCGCGCCGACAGCACGTCGATCCCTT
TCACAACCTCTTCTACGTCGTCAAGGGGGCCAAGAGAAAGCGTCGTTGCT
GTGCGTAGTTGCTCGTGA
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Coding sequence (CDS) from alignment at chr9:905017..906834-

>NO09G03100.1 ID=NO09G03100.1|Name=NO09G03100.1|organism=Nannochloropsis oceanica|type=CDS|length=450bp|location=Sequence derived from alignment at chr9:905017..906834- (Nannochloropsis oceanica)
ATGCACACGGTATGGCAATCGTGCCACCCAGGCACGCGATACAGGCTCTT
CGAGAGTATTGGGGGCTTGTTCTGGAGGAAAAGTGGGCCGAAGTCGACCA
ACCACTACTGGAGCAGCAAAAGCCCTCCCGACGGGCGAGGGTACAATGAA
GAGCAAGAGCGAGAATTCGAGCAGGATGAGCAAGCCACACACCCTGGCCT
ACCGCCGGCTCGCTTCTCCGTACGGCCCCCGTCGCGCAATGGCCCAAACT
ATATTTTTCTTCAGAAAAAGAGGAAGCCGACAGAAGCCACGGATACCACC
TCGCAGGAGAAAGACATCGAGGCAGAGGATGCCACAAAGATGGAAGGTGC
TTCATATCGCGCCGACAGCACGTCGATCCCTTTCACAACCTCTTCTACGT
CGTCAAGGGGGCCAAGAGAAAGCGTCGTTGCTGTGCGTAGTTGCTCGTGA
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Synonyms
Publications