NO09G03070, NO09G03070 (gene) Nannochloropsis oceanica

Overview
NameNO09G03070
Unique NameNO09G03070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1696
Alignment locationchr9:895913..897608 -

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Properties
Property NameValue
DescriptionU3 small nucleolar rna-associated protein 15
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:895913..897608 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR018983U3_snoRNA-assocProt_15_C
IPR001680WD40_repeat
Homology
BLAST of NO09G03070 vs. NCBI_GenBank
Match: EWM27505.1 (u3 small nucleolar rna-associated protein 15 [Nannochloropsis gaditana])

HSP 1 Score: 765.8 bits (1976), Expect = 9.000e-218
Identity = 394/537 (73.37%), Postives = 444/537 (82.68%), Query Frame = 0
Query:    1 MADYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAASEI------------------------------------PVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSP-LHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGL----FPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIE 497
            MADYKKVRHRQRPRPVERPKPDGNFW+KFIKPTDLSFPGAVYA+DF+PL+P+DALVTASARLSLVS+SRG+PKVSKTFSR NGLAYSGVFRPTDG+LIACGDD GVVTVFD+ATKASLRQFTTAA HRGTTGAAAR+VRWR+DGLALFSGSDDKCVRYWDLGT QLLTTIPQAH DYVRCGA NPAAASE+                                    PVEAC+ LPGGSLLVSAG                    LH+FSNHAKTITSLT DREGSRLLS+SLDGHVKVYDLQTYDVLHS R +GPLLSVGL+P+ GKL++G+ADG  S+RTRR+A ++TS++  SSSSGL     P+T   PLLFGGT ++F RGKNAVA  GDF+VELAKR RLAPYD++LKGF+YHEALD+AL SRNPRTIVAVLDEL+MRRGL+++LTGRDEAG+EPLLAFLARYLNHPD+A SL + CH VLD+YAPM+GQS VLDEL+GRVARGVKAEV VQREML L+GAM+M++ATQ+E
Sbjct:    1 MADYKKVRHRQRPRPVERPKPDGNFWSKFIKPTDLSFPGAVYAVDFNPLSPYDALVTASARLSLVSLSRGSPKVSKTFSRFNGLAYSGVFRPTDGKLIACGDDNGVVTVFDMATKASLRQFTTAATHRGTTGAAARIVRWRKDGLALFSGSDDKCVRYWDLGTAQLLTTIPQAHKDYVRCGAINPAAASELFVSGSYDHTLKVWDMRGRXXXXXXXNRPVSRFNHGCPVEACLALPGGSLLVSAGXXXXXXXXXXXXXXXXXXXLLHAFSNHAKTITSLTTDREGSRLLSASLDGHVKVYDLQTYDVLHSFRAAGPLLSVGLAPDNGKLVMGQADGTFSVRTRRSALTSTSAAPISSSSGLPSSELPRT---PLLFGGTARHFHRGKNAVAGAGDFQVELAKRQRLAPYDISLKGFRYHEALDKALASRNPRTIVAVLDELIMRRGLRVALTGRDEAGMEPLLAFLARYLNHPDYASSLSDVCHMVLDIYAPMLGQSPVLDELIGRVARGVKAEVAVQREMLGLVGAMDMLIATQLE 534          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: ETM38418.1 (hypothetical protein L914_15281, partial [Phytophthora parasitica])

HSP 1 Score: 354.8 bits (909), Expect = 4.800e-94
Identity = 204/527 (38.71%), Postives = 302/527 (57.31%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    + ++W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KTFSR   + YSG FR +DG+L+  G +   V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL T + L  + + H DYVR  A NP++ +                                  PVEAC+++PGGSLL+SAG +TIK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:    6 EFKRLVLKQFPATNEVETAENSYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTFSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTAKPLGLLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMIMPGGSLLLSAGGNTIKVWDILSGG----RMLHSFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLTFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 506          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: XP_002906988.1 (U3 small nucleolar RNA-associated protein, putative [Phytophthora infestans T30-4] >EEY66389.1 U3 small nucleolar RNA-associated protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 354.8 bits (909), Expect = 4.800e-94
Identity = 204/527 (38.71%), Postives = 302/527 (57.31%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    + ++W KF  P DL   G V  +D  P+APH   +T+S R+ L S +    ++ KTFSR   + YSG FR +DG+L+  G +   V V D+ T++ LR F      +G T AA R  R+  D + + S SDDK  RYWDL TG+ L  + + H DYVR  A NP++ +                                  PVEAC+V+PGGSLL+S G +TIK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  + D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:    6 EFKRLVLKQFPATNEVETAENSYWKKFHAPQDLQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTFSRFRDVVYSGTFR-SDGKLLVAGGEAPFVQVLDINTRSILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTGKPLALLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMVMPGGSLLLSTGGNTIKVWDILCGG----RMLHSFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLAFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIMCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 506          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: ETI38365.1 (hypothetical protein F443_15868 [Phytophthora parasitica P1569] >ETO67136.1 hypothetical protein F444_15849 [Phytophthora parasitica P1976] >ETP08245.1 hypothetical protein F441_15701 [Phytophthora parasitica CJ01A1] >KUF87165.1 hypothetical protein AM588_10003708 [Phytophthora nicotianae] >KUF94655.1 U3 small nucleolar RNA-associated protein 15 [Phytophthora nicotianae])

HSP 1 Score: 353.6 bits (906), Expect = 1.100e-93
Identity = 203/527 (38.52%), Postives = 302/527 (57.31%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    + ++W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KT+SR   + YSG FR +DG+L+  G +   V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL T + L  + + H DYVR  A NP++ +                                  PVEAC+++PGGSLL+SAG +TIK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:    6 EFKRLVLKQFPATNEVETAENSYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTYSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTAKPLGLLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMIMPGGSLLLSAGGNTIKVWDILSGG----RMLHSFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLTFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 506          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: ETP36338.1 (hypothetical protein F442_15709, partial [Phytophthora parasitica P10297])

HSP 1 Score: 353.6 bits (906), Expect = 1.100e-93
Identity = 203/527 (38.52%), Postives = 302/527 (57.31%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    + ++W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KT+SR   + YSG FR +DG+L+  G +   V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL T + L  + + H DYVR  A NP++ +                                  PVEAC+++PGGSLL+SAG +TIK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:   30 EFKRLVLKQFPATNEVETAENSYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTYSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTAKPLGLLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMIMPGGSLLLSAGGNTIKVWDILSGG----RMLHSFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLTFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 530          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: XP_009538606.1 (hypothetical protein PHYSODRAFT_356172 [Phytophthora sojae] >EGZ05745.1 hypothetical protein PHYSODRAFT_356172 [Phytophthora sojae])

HSP 1 Score: 353.2 bits (905), Expect = 1.400e-93
Identity = 203/527 (38.52%), Postives = 301/527 (57.12%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAA-------------------ASE-------------IPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    +  +W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KTFSR   + YSG FR +DG+L+  G +   V V D+ T+A LR F     H     AA R  R+  D + + S SDDK  RYWDL TG+ L  + + H DYVR  A NP++                   AS+              PVE+C+++PGGSLL+SAG ++IK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP+   L  G  DG L++R R    +  + +            +   ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ VMA Q  G
Sbjct:    6 EFKRLVLKQFPATTEVETAENTYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTFSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF---KGH----SAAIRSTRFSADNVHVLSCSDDKTSRYWDLPTGKPLALLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRASDQTVSKSTMSLDHGAPVESCMIMPGGSLLLSAGGNSIKVWDILSGG----RLLHSFSSHQKTITSLGLDGSGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLAFGMSPSNSHLFAGTVDGILAVRRRTVKRAEQTDA-----------KNRQAIIRGGSYKYFLRGKNAQPAPADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEETLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLGVVGMMDSVMAAQSNG 506          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: ETL32022.1 (hypothetical protein L916_15318, partial [Phytophthora parasitica])

HSP 1 Score: 352.4 bits (903), Expect = 2.400e-93
Identity = 200/508 (39.37%), Postives = 293/508 (57.68%), Query Frame = 0
Query:   22 DGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            + ++W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KTFSR   + YSG FR +DG+L+  G +   V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL T + L  + + H DYVR  A NP++ +                                  PVEAC+++PGGSLL+SAG +TIK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:    2 ENSYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTFSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTAKPLGLLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMIMPGGSLLLSAGGNTIKVWDILSGG----RMLHSFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLTFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 483          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: ETK78591.1 (hypothetical protein L915_15424, partial [Phytophthora parasitica])

HSP 1 Score: 352.1 bits (902), Expect = 3.100e-93
Identity = 203/519 (39.11%), Postives = 296/519 (57.03%), Query Frame = 0
Query:   11 QRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            Q P   E    + ++W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KTFSR   + YSG FR +DG+L+  G +   V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL T + L  + + H DYVR  A NP++ +                                  PVEAC+++PGGSLL+SAG +TIK+WD+L GG      LHSFS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:    1 QFPATNEVETAENSYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTFSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTAKPLGLLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMIMPGGSLLLSAGGNTIKVWDILSGG----RMLHSFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLTFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 493          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: XP_024585042.1 (u3 small nucleolar rna-associated [Plasmopara halstedii] >CEG48673.1 u3 small nucleolar rna-associated [Plasmopara halstedii])

HSP 1 Score: 352.1 bits (902), Expect = 3.100e-93
Identity = 201/527 (38.14%), Postives = 304/527 (57.69%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    +  +W KF  P +    G V  +D  P+APH   +T+S R+ L S +    ++ KTFSR   + YSG FR +DG+L+  G +  +V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL TG+ LT + + H DYVR  A +P++ +                                  PVEAC+++PGGSLL+SAG + IK+WD+L GG      LHS S+H KTITSL++D   +RL+S SLDGH+K+YD++TY++ H  ++   +LS G+ P    L+ G  DG L++R RR       + +          T+   ++ GG+ KYF RGKN+  +  D+ V  ++  R+ PYD AL+ F+Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +K EV VQ+++L ++G M+ +MA Q +G
Sbjct:    6 EFKRLVLKQFPVANEVESAEHLYWKKFYAPQEFQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTFSRFRDVVYSGTFR-SDGKLLVAGGEFPLVQVLDINTRAILRSF------KGHT-AAVRSTRFSTDNVHVLSCSDDKTARYWDLPTGKPLTLLGE-HSDYVRSSAISPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSIICLDHGAPVEACMIMPGGSLLLSAGGNVIKVWDILSGG----RMLHSLSSHQKTITSLSLDGTSTRLMSGSLDGHLKIYDVKTYELTHGFKYKSGVLSFGMLPTNSHLLAGTVDGILAVR-RRTVRRVEQNDI----------TTRQAIIRGGSYKYFLRGKNSKPTAADYTVATSRHKRIQPYDRALRKFEYKKALNEALDTRSPVVVASILEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDGLFVKLCEKLKEEVRVQKQVLSMVGMMDSLMAAQSDG 506          
BLAST of NO09G03070 vs. NCBI_GenBank
Match: XP_008895464.1 (hypothetical protein PPTG_04880 [Phytophthora parasitica INRA-310] >ETN19639.1 hypothetical protein PPTG_04880 [Phytophthora parasitica INRA-310])

HSP 1 Score: 351.7 bits (901), Expect = 4.000e-93
Identity = 202/527 (38.33%), Postives = 301/527 (57.12%), Query Frame = 0
Query:    3 DYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLAPHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIACGDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSGSDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAAS--------------------------------EIPVEACVVLPGGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSRLLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGCLSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVASTGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDELVMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYAPMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEG 498
            ++K++  +Q P   E    + ++W KF  P +L   G V  +D  P+APH   +T+S R+ L S +    ++ KT+SR   + YSG FR +DG+L+  G +   V V D+ T+A LR F      +G T AA R  R+  D + + S SDDK  RYWDL T + L  + + H DYVR  A NP++ +                                  PVEAC+++PGGSLL+SAG +TIK+WD+L GG      LH FS+H KTITSL +D  G+RL+S SLDGH+K+YDL+TY++ H  ++   +L+ G+SP    L  G  DG L++R RR    T  + + +  +          ++ GG+ KYF RGKNA  +  D+ V   +  R+ PYD AL+ F Y +AL+ AL++R+P  + ++L+EL +R GLK +L GRDE  LEPLLAFL +Y+  P +A  L   C  V D+YAP + QS ++D L  ++   +  E+ VQ+++L ++G M+ +MA Q  G
Sbjct:    6 EFKRLVLKQFPATNEVETAENSYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAITSSTRIHLYSTTTN--EIVKTYSRFRDVVYSGTFR-SDGKLLVAGGEAPYVQVLDINTRAILRSF------KGHT-AAIRSTRFSADNVHVLSCSDDKTARYWDLPTAKPLGLLGE-HSDYVRSSAANPSSHNVWATGSYDHTVKLWDLRTSDQTVSKSTMNLDHGAPVEACMIMPGGSLLLSAGGNTIKVWDILSGG----RMLHPFSSHQKTITSLGLDGTGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGVLTFGMSPTNSHLFAGTVDGILAVR-RRTLKRTEQNDIKTRQA----------IIRGGSYKYFLRGKNAKPAAADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALGGRDEESLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLNEELRVQKQVLSVVGMMDSLMAAQSNG 506          
The following BLAST results are available for this feature:
BLAST of NO09G03070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27505.19.000e-21873.37u3 small nucleolar rna-associated protein 15 [Nann... [more]
ETM38418.14.800e-9438.71hypothetical protein L914_15281, partial [Phytopht... [more]
XP_002906988.14.800e-9438.71U3 small nucleolar RNA-associated protein, putativ... [more]
ETI38365.11.100e-9338.52hypothetical protein F443_15868 [Phytophthora para... [more]
ETP36338.11.100e-9338.52hypothetical protein F442_15709, partial [Phytopht... [more]
XP_009538606.11.400e-9338.52hypothetical protein PHYSODRAFT_356172 [Phytophtho... [more]
ETL32022.12.400e-9339.37hypothetical protein L916_15318, partial [Phytopht... [more]
ETK78591.13.100e-9339.11hypothetical protein L915_15424, partial [Phytopht... [more]
XP_024585042.13.100e-9338.14u3 small nucleolar rna-associated [Plasmopara hals... [more]
XP_008895464.14.000e-9338.33hypothetical protein PPTG_04880 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010842NSK010842Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03070.1NO09G03070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630132gene_4236Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100099g12gene3063Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03070.1NO09G03070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03070 ID=NO09G03070|Name=NO09G03070|organism=Nannochloropsis oceanica|type=gene|length=1696bp
ATGGCAGACTACAAAAAAGTACGCCATCGGCAACGGCCTCGACCGGTAGA
GCGCCCCAAACCGGACGGCAACTTCTGGGCCAAGTTTATCAAGCCCACCG
ACCTCTCCTTCCCCGGCGCCGTCTACGCCTTGGATTTTCACCCTCTGGCC
CCGCATGATGCCCTCGTCACAGCCTCGGCACGATTGTCCTTAGTCTCAAT
CAGTCGTGGTGCACCCAAAGTCAGCAAGACGTTTTCCCGGCTGAATGGTT
TGGCGTACTCCGGAGTCTTCCGTCCAACCGACGGGCGGCTCATAGCGTGT
GGAGACGATGGGGGCGTCGTCACTGTCTTTGACGTGGCCACCAAGGCCTC
CCTCCGTCAATTTACCACCGCAGCCAATCACCGTGGTACCACAGGCGCAG
CTGCTCGTGTTGTGCGCTGGCGAAGGGATGGCCTGGCATTGTTTTCGGGG
TCGGATGATAAGTGCGTGCGGTATTGGGACTTGGGGACAGGCCAGCTCTT
GACCACAATCCCACAAGCCCATGGGGACTACGTCCGTTGCGGTGCCACTA
ACCCTGCAGCAGCCTCGGAGATgttcgtgtcaggctcgtatgaccacaca
ttgaaactatgggacatgcgagggaggggggagggggggagggagcaatc
ggccagttgctagctttgaccacggcagTCCTGTGGAGGCCTGCGTGGTG
CTACCAGGGGGCTCCTTGCTCGTCTCCGCCGGAACAGACACTATCAAAAT
ATGGGATTTGCTCGGCGGCGGTGGAGAAGGCAATAGTCCTCTGCATTCTT
TCTCAAATCACGCCAAGACCATCACTAGCCTTACAATCGATCGAGAGGGC
TCTCGCCTGCTGTCCTCCTCACTAGATGGGCACGTCAAAGTGTACGACCT
TCAGACGTACGATGTCCTCCACTCTCTCCGGTTCTCCGGACCCCTCCTCA
GCGTCGGTCTCTCCCCCAACAAGGGCAAGCTCATGGTCGGGAAAGCTGAT
GGATGCCTCTCCATTCGCACCCGCCGCGCCGCCACCAGCACGACCTCGTC
CTCCCTCCCTTCCTCGTCCTCTGGTCTTTTCCCCAAAACCAGCACTAATC
CCCTGCTTTTCGGTGGTACGACCAAATATTTCCAACGAGGAAAAAATGCT
GTTGCGTCCACGGGGGATTTTGAGGTGGAGCTGGCGAAGCGTCATCGACT
CGCGCCTTACGACGTAGCCTTGAAGGGATTCAAGTACCATGAGGCTCTGG
ATAGAGCGCTGGAAAGTCGGAATCCGCGTACGATCGTCGCTGTTCTCGAC
GAGCTGGTGATGCGGAGGGGATTGAAGATTTCGCTTACCGGGAGGGATGA
AGCGGGCCTGGAGCCGTTACTGGCTTTCTTGGCACGATATTTGAATCATC
CTGATTTTGCGCTGTCCCTTGGAGAGGCCTGCCATTTTGTACTAGACATG
TACGCACCTATGGTGGGGCAGTCTGCGGTGCTTGACGAGCTAATGGGGAG
GGTGGCCCGGGGGGTTAAGGCTGAAGTTGGAGTGCAGAGGGAGATGCTGG
AGTTGCTGGGAGCGATGGAGATGGTGATGGCGACCCAGATCGAGGGGGGG
GGGGGGGGGGGGGGAGGGAGGGGGGGGGGATGTGGAGTTGTTAGAGGGGG
ATGGAAAGGAGGAGAAGGAGGAGAAGGAGGGGGAGGAGGCCAGTGA
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protein sequence of NO09G03070.1

>NO09G03070.1-protein ID=NO09G03070.1-protein|Name=NO09G03070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=530bp
MADYKKVRHRQRPRPVERPKPDGNFWAKFIKPTDLSFPGAVYALDFHPLA
PHDALVTASARLSLVSISRGAPKVSKTFSRLNGLAYSGVFRPTDGRLIAC
GDDGGVVTVFDVATKASLRQFTTAANHRGTTGAAARVVRWRRDGLALFSG
SDDKCVRYWDLGTGQLLTTIPQAHGDYVRCGATNPAAASEIPVEACVVLP
GGSLLVSAGTDTIKIWDLLGGGGEGNSPLHSFSNHAKTITSLTIDREGSR
LLSSSLDGHVKVYDLQTYDVLHSLRFSGPLLSVGLSPNKGKLMVGKADGC
LSIRTRRAATSTTSSSLPSSSSGLFPKTSTNPLLFGGTTKYFQRGKNAVA
STGDFEVELAKRHRLAPYDVALKGFKYHEALDRALESRNPRTIVAVLDEL
VMRRGLKISLTGRDEAGLEPLLAFLARYLNHPDFALSLGEACHFVLDMYA
PMVGQSAVLDELMGRVARGVKAEVGVQREMLELLGAMEMVMATQIEGGGG
GGGGRGGGCGVVRGGWKGGEGGEGGGGGQ*
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Synonyms
Publications