NO09G02920, NO09G02920 (gene) Nannochloropsis oceanica

Overview
NameNO09G02920
Unique NameNO09G02920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2181
Alignment locationchr9:857561..859741 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 3 subunit E
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:857561..859741 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR016650eIF3e
IPR019010eIF3e_N
IPR000717PCI_dom
Homology
BLAST of NO09G02920 vs. NCBI_GenBank
Match: EWM27525.1 (eukaryotic translation initiation factor 3 subunit e [Nannochloropsis gaditana])

HSP 1 Score: 884.4 bits (2284), Expect = 1.800e-253
Identity = 429/489 (87.73%), Postives = 456/489 (93.25%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEVRALEELEEYPSPELEARSKALDDEEEVLREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLAALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQKIFGQPMGGYPDR 490
            MAEYDLT KIAPF DVHFLVQ DGP DFL+ QA Y+   DVMRAK+ALL KTKN DG++RALEEL+E   PELEA+ +A D+ EEVLREAAGDALDMFS++DMT IKEYVTAGATDP E+LE KEKLLAALPAYYDYAKFKYERGEYDDA +FLNNYIQAIGDRAAFSTVRYS+ALWGRLG+ ILTQQWHLVK+AV+AIDKHIMTVKRREDGVPPT P+ +DPDPIRSMSDREKLQLRTW+LHWCLFAYP TP+EARKRE AGDKWENILELIFP ND+KQGPGNGPDRYRQA+QNNAPWLLRY+TTMVILHKRP+SERFRRKQDVIKEVIWLIEQEAY YQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFL EARQLIFETYCRIHQKIDINMLGQKLGMS AEAEKWIVDLILDSKLVAKIDSRDNYVEM+T SPSVY QVLDRTERLASSTFRLGTDTQKIFGQ +GGYPDR
Sbjct:    1 MAEYDLTQKIAPFTDVHFLVQSDGPLDFLIEQAEYYSYDDVMRAKLALLAKTKNVDGQLRALEELQEDIPPELEAQQQANDEREEVLREAAGDALDMFSLEDMTTIKEYVTAGATDPAEKLEMKEKLLAALPAYYDYAKFKYERGEYDDAYLFLNNYIQAIGDRAAFSTVRYSHALWGRLGAVILTQQWHLVKDAVEAIDKHIMTVKRREDGVPPTMPSPSDPDPIRSMSDREKLQLRTWVLHWCLFAYPVTPDEARKRESAGDKWENILELIFPVNDEKQGPGNGPDRYRQAVQNNAPWLLRYVTTMVILHKRPMSERFRRKQDVIKEVIWLIEQEAYTYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLVEARQLIFETYCRIHQKIDINMLGQKLGMSPAEAEKWIVDLILDSKLVAKIDSRDNYVEMNTRSPSVYHQVLDRTERLASSTFRLGTDTQKIFGQTLGGYPDR 489          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: ODM98745.1 (Eukaryotic translation initiation factor 3 subunit E [Orchesella cincta])

HSP 1 Score: 252.3 bits (643), Expect = 3.600e-63
Identity = 171/492 (34.76%), Postives = 255/492 (51.83%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEVRALEEL---EEYPSPELEARSKALDDEEEV---------LREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLAALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQKIFG 481
            MA+YDLT K   + D H LV P    +FLV Q  Y    DV+++K+ALL +TK  D  +   ++L   +E P   L+ R K ++D + V         + E  G A  + +  D  ++ EY+       PER++          + YD AK  YE G+Y  AS  LN + + +      +   Y + LWG+L   IL  QW    E  + +  +I                  D DP R  +  + LQ RTWLLHW L+ Y           +    W+ +L+L+  +N+ K         Y   +Q   P +LRY  T VI+ K        R    +KE++ +I+QE+Y Y+DPIT+F++CL+V FDFDGAQ+KL+ C  VL ND+FL    + F+  AR +IFET+CRIHQ I I ML +KL M+  +AE+WIV+LI +++L AK+DS+  +V M  H+ S YQQ++ +TE L+  +  L     +  G
Sbjct:    1 MAQYDLTGKNGQYLDRH-LVAP--LLEFLVAQNIY-SANDVLQSKLALLTETKMVDYAIDVFKKLHADQEVPQKFLDKRQKVVEDYKAVQETSKSIQQILEDPGLAEQISNSRDYRQLVEYLVKNHDFKPERID----------SIYDDAKLYYECGDYQTASQLLNLHNELV----PTTDKNYLSGLWGKLACNILLHQWDYGMEDFEKLKTYI------------------DEDPFR--NSLQTLQQRTWLLHWGLYLY----------FNHAKGWDFLLDLL--SNNAK---------YLNVIQTTCPHILRYWATAVIISKH------NRHSTAMKELVQVIQQESYTYKDPITEFIECLHVNFDFDGAQKKLKECETVLSNDFFLISCYNEFIDHARLMIFETFCRIHQCISIGMLAEKLDMTTDDAERWIVNLIRNARLDAKLDSKLGHVVMGVHAVSPYQQIIGKTEFLSMRSQILANSVARKLG 427          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_001636266.1 (predicted protein [Nematostella vectensis] >A7RWP6.1 RecName: Full=Eukaryotic translation initiation factor 3 subunit E; Short=eIF3e; AltName: Full=Eukaryotic translation initiation factor 3 subunit 6 >EDO44203.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 249.2 bits (635), Expect = 3.000e-62
Identity = 179/505 (35.45%), Postives = 266/505 (52.67%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEVRALEEL---EEYPSPELEARSKALDDEEEVLREAAGDALDMFSIDDMT----------KIKEYVTAGATDPPERLECKEKLLAALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQKIFGQPMGGYPDRRGG 493
            MAE+DLT K+  F D H LV P    +FL  +  Y +  ++++ K+ LL  T   D  +   + L   EE P+  +E R + + + ++ L+      ++ FS  + T          ++ EY+       PE L+            Y +AKF+YE G Y  A+ +L  Y +A+      +++   NALWG+L S IL Q W          D  +  + R +D +          +   S    + LQ RTWL+HW LF +   P+            + I++LI               +Y  A+Q   P +LRY+TT VI +K        R++ V+K+++ +I+QE+Y Y+DPIT+FL+CLYV FDFDGAQ+KL+ C  VL ND+FL    D F+  AR  IFET+CRIHQ I I+ML +KL M+  EAE+WIV+LI ++KL AKIDS+  +V M   +PSVYQQV+++T+ L   T  L  + +K   Q  GGY D  GG
Sbjct:    1 MAEHDLTSKMGCFLDRH-LVFP--LLEFLSVKEIYDE-HELLKGKLDLLSNTNMVDFAMDVYKGLYPDEEVPTSLVEKRVEVVKELKD-LQAQTEPIINCFSDPEFTAQVQSTRDGRQLFEYLERNHDIKPEMLD----------VLYKFAKFQYECGNYSGAAEYLYFY-RALAPGGDTNSL---NALWGKLASEILMQNW----------DTALEDLNRLKDVI----------ESNTSAGTLQLLQERTWLIHWSLFVFFNHPKGR----------DLIIDLIL-----------YQPQYLNAIQTMCPHILRYLTTAVITNK--------RRRPVLKDLVKVIQQESYTYRDPITEFLECLYVNFDFDGAQKKLRECETVLLNDFFLVACRDDFIENARLFIFETFCRIHQCISISMLAEKLNMTPEEAERWIVNLIRNAKLDAKIDSKLGHVVMGVQAPSVYQQVIEKTKNLQYKTQVLAGNIEKKLTQDKGGY-DAYGG 436          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_011667358.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit E isoform X3 [Strongylocentrotus purpuratus])

HSP 1 Score: 248.8 bits (634), Expect = 3.900e-62
Identity = 173/484 (35.74%), Postives = 254/484 (52.48%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEV---RALEELEEYPSPELEARSKALDDEEEVLREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLA----ALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQK 478
            MAE+DLT KI  + D H LV P    +FL  Q  Y +  D+++ K+ LL  T   D  +   + L E +E P    E R+  ++     L+    D   +  I +   ++E++ + A D  +  E  EK        L   YDYAKF+Y+ G Y  AS +L  +   +      S  + +++LWG+L S IL Q W    E ++ + + I  V + +                  ++  + LQ RTWL+HW LF Y   PE    R+   DK+     L  PA             Y  A+Q   P +LRY+TT VI +K        R++ V+K+++ +I+QE+Y Y+DPIT+F++CLYV FDFDGAQ+KL+ C  VL ND+FL      F+  AR  IFET+CRIH  I INML +KL M   EAE+WIV+LI +++L AK+DS+  +V M T S S YQQV+++T+ L      L    +K
Sbjct:    1 MAEFDLTAKIGQYLDRH-LVFP--LLEFLSVQEIYDE-KDMLQGKLDLLSNTNMVDFAMDVYKTLNEDQEVPQTLKEKRADVVNQ----LKRLQQDTEPIIEIFENADVREHIQS-ARDSRQLFEYLEKNHGFKHDNLSLLYDYAKFQYDCGNYSGASEYLYFHRTLVPP----SDPKSTSSLWGKLASEILMQNWEGALEDLNKLQEVIDPVDKMDS---------------HFITPLQSLQQRTWLIHWSLFVYFNHPE---GRDLIIDKF-----LYQPA-------------YLNAIQTMCPHILRYLTTAVITNK-------SRRRSVLKDLVRVIQQESYTYRDPITEFVECLYVNFDFDGAQQKLRECEKVLVNDFFLVACLQDFIENARLFIFETFCRIHNCISINMLAEKLNMLPDEAERWIVNLIRNARLDAKLDSKLGHVVMGTQSVSPYQQVIEKTKNLIHRNQLLAVSLEK 428          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_021950644.1 (eukaryotic translation initiation factor 3 subunit E-B-like [Folsomia candida] >OXA62558.1 Eukaryotic translation initiation factor 3 subunit E-B [Folsomia candida])

HSP 1 Score: 248.8 bits (634), Expect = 3.900e-62
Identity = 169/476 (35.50%), Postives = 251/476 (52.73%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEVRALEEL---EEYPSPELEARSKALDDEEEV---------LREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLAALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERL 465
            MA+YDLT KI+   D H LV P    +F+ GQ  Y Q  +V+++K+ LL +TK  D  +   ++L   +E P   +E R+K +++ + V         + E+A  A  + +  D  ++ EY+       PE ++          + YDYAK  YE G+Y  AS +LN + + +      S   Y + LWG+L   IL  QW    E  + +                   T  D DP R+    + LQ RTWLLHW L+ Y           +    W+ +L+L+  +N+ K         Y   +Q   P +LRY  T VI+ K        R    +KE++ +I+QE Y Y+DPIT+F++CL+V FDFDGAQ+KL+ C  VL ND+FL    + F+  AR +IFET+CRIHQ I I ML +KL M+  EAE+WIV+LI +++L AK+DS+  +V M T   S YQQ++ +TE L
Sbjct:    1 MAQYDLTSKISQNLDRH-LVAP--LLEFIAGQNIYNQ-QEVLQSKLDLLVETKMVDYAIDVFKKLHPEKEIPPKFMEKRTKVVEEYKSVQESSKPITAILESAELAEQISNSRDYRQLVEYLAKAHNFKPEMID----------SIYDYAKLYYECGDYSTASQYLNLHNELVPS----SDKNYLSGLWGKLACNILLHQWEYGLEDFEKL------------------KTFIDEDPFRNA--LQTLQQRTWLLHWGLYLY----------FNHTKGWDFLLDLL--SNNAK---------YLNVIQTTCPHILRYWATAVIISKH------SRHSSAMKELVAVIQQETYTYKDPITEFIKCLHVNFDFDGAQQKLKECERVLSNDFFLISCYNDFIDHARLMIFETFCRIHQCISIGMLAEKLDMTTDEAERWIVNLIRNARLDAKLDSKLGHVVMGTSKISPYQQIIGKTEFL 411          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_002735030.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit E [Saccoglossus kowalevskii])

HSP 1 Score: 248.1 bits (632), Expect = 6.700e-62
Identity = 178/509 (34.97%), Postives = 262/509 (51.47%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEVRALEELEEYPSPELEARSKALDDEEEV---LREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLAALP----AYYDYAKFKYERGEYDDAS--IFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQK--------IFGQPMGGYPDRRGG 493
            MAE+DLT +I  + D H LV P    +FL  +A Y +  ++++ K+ LL +T   D  +   + L     PE+E   +  D  +EV   L++  G+   +  I D  ++   V     D  +  +   K    +P      Y YAKF+YE G Y  A+  ++ +  +    D+ A S      +LWG+L S IL Q W    E ++ +   I                    D    ++  + LQ RTWL+HW LF +   P    K  DA      I++L        Q P      Y  A+Q   P +LRY+TT VI +K        R++ V+K+++ +I+QE+Y Y+DPIT+FL+CLYV FDFDGAQ+KL+ C  VL ND+FL    D F+  AR  IFET+CRIHQ I INML +KL MS  EAEKWIV+LI +++L AKIDS+  +V M T + S YQQV+++T+ L+  +  +  + +K          G P  G P+   G
Sbjct:    1 MAEFDLTSRIGQYLDRH-LVFP--LLEFLSVKAIY-EEQEMLQGKLDLLSETNMVDFAMDVYKNLH----PEIEVPLQLRDKRQEVVSELKKLQGETEPIVKIFDDPEVNTQV-QNTRDGRQLFDYLAKSHGFVPEMLDTLYRYAKFQYECGNYSGAAEYLYFHRVLVLPNDKNALS------SLWGKLASEILMQNWEAALEDLNRLKDVI--------------------DSNAFVTPLQSLQQRTWLIHWSLFVFFNHP----KGRDA------IIDLFL-----YQPP------YLNAIQTLCPHILRYLTTAVITNK--------RRRTVLKDLVKVIQQESYTYRDPITEFLECLYVNFDFDGAQQKLRECETVLVNDFFLVACLDDFIENARLFIFETFCRIHQCISINMLAEKLNMSPDEAEKWIVNLIRNARLDAKIDSKQGHVVMGTQAVSPYQQVIEKTKGLSFKSINMAMNIEKREAAKQQTAAGIPQWGTPELGAG 445          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: ORX93845.1 (eukaryotic translation initiation factor 3, subunit 6 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 247.7 bits (631), Expect = 8.800e-62
Identity = 166/472 (35.17%), Postives = 251/472 (53.18%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEV---RALEELEEYPSPELEARSKALDDEEEVLREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLAALP----AYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLA 466
            MA+YDLT K+ P+ D H LV P    +FL  +  Y +  D+++AK  LL KT   D      + +  +EE P+ E   + K + D  E L+  AG  L++    D+      ++A   D  + L+   +     P      Y + K+++  G Y  ++  L ++     D    S +  S ALWG+L S ILT  W +  E +  + + I                    D     S   +LQ R+WL+HW LF +   P             + I+++ F              ++   +Q++ PW+LRY+TT VI +K        R++ ++K+++ +IEQE+Y YQDPIT+F++CLYV+FDF+GAQ+KL  C  VL ND+FL    D F+  AR  I ETYCRIHQKIDI+ L Q L MS  E EKWIV+LI D+++ AKID ++N V M+T+ PS+YQQV++RT+ L+
Sbjct:    1 MAQYDLTSKMVPYLDRH-LVYP--LLEFLSLKEIYPE-EDILQAKYDLLSKTNMIDTAAELFKQIHHVEEAPA-EFTDKRKNVIDTLEGLQSEAGKVLEVIENPDV------ISALRQDKFQNLQFLREKYNITPEMVSILYQFGKYQFNCGIYGASADMLYHFRVLSTD----SEMNLS-ALWGKLASEILTGNWEVALEDLQKLKEAI--------------------DQKNFPSPLHQLQQRSWLIHWSLFVFFNHPNGR----------DGIIDMFF------------QPQFISTIQSSCPWILRYLTTAVITNK--------RRKGIMKDLVKIIEQESYTYQDPITEFVKCLYVKFDFEGAQKKLSECEEVLANDFFLVATLDDFVENARCFISETYCRIHQKIDISDLSQTLNMSQDEGEKWIVNLIRDTRVDAKIDFKENTVLMNTNYPSIYQQVIERTKGLS 406          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_011667357.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit E isoform X2 [Strongylocentrotus purpuratus])

HSP 1 Score: 246.5 bits (628), Expect = 2.000e-61
Identity = 173/484 (35.74%), Postives = 252/484 (52.07%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEV---RALEELEEYPSPELEARSKALDDEEEVLREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLA----ALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQK 478
            MAE+DLT KI  + D H LV P    +FL  Q  Y +  D+++ K+ LL  T   D  +   + L E +E P    E R+  ++     L+    D   +  I +   ++E++ + A D  +  E  EK        L   YDYAKF+Y+ G Y  AS +L  +   +      ST+    +LWG+L S IL Q W    E ++ + + I  V + +                  ++  + LQ RTWL+HW LF Y   PE    R+   DK+     L  PA             Y  A+Q   P +LRY+TT VI +K        R++ V+ +++ +I+QE+Y Y+DPIT+F++CLYV FDFDGAQ+KL+ C  VL ND+FL      F+  AR  IFET+CRIH  I INML +KL M   EAE+WIV+LI +++L AK+DS+  +V M T S S YQQV+++T+ L      L    +K
Sbjct:    1 MAEFDLTAKIGQYLDRH-LVFP--LLEFLSVQEIYDE-KDMLQGKLDLLSNTNMVDFAMDVYKTLNEDQEVPQTLKEKRADVVNQ----LKRLQQDTEPIIEIFENADVREHIQS-ARDSRQLFEYLEKNHGFKHDNLSLLYDYAKFQYDCGNYSGASEYLYFHRTLVPPSDPKSTI----SLWGKLASEILMQNWEGALEDLNKLQEVIDPVDKMDS---------------HFITPLQSLQQRTWLIHWSLFVYFNHPE---GRDLIIDKF-----LYQPA-------------YLNAIQTMCPHILRYLTTAVITNK-------SRRRSVLLDLVRVIQQESYTYRDPITEFVECLYVNFDFDGAQQKLRECEKVLVNDFFLVACLQDFIENARLFIFETFCRIHNCISINMLAEKLNMLPDEAERWIVNLIRNARLDAKLDSKLGHVVMGTQSVSPYQQVIEKTKNLIHRNQLLAVSLEK 428          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_011667356.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit E isoform X1 [Strongylocentrotus purpuratus])

HSP 1 Score: 246.1 bits (627), Expect = 2.600e-61
Identity = 172/484 (35.54%), Postives = 253/484 (52.27%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEV---RALEELEEYPSPELEARSKALDDEEEVLREAAGDALDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLA----ALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQK 478
            MAE+DLT KI  + D H LV P    +FL  Q  Y +  D+++ K+ LL  T   D  +   + L E +E P    E R+  ++     L+    D   +  I +   ++E++ + A D  +  E  EK        L   YDYAKF+Y+ G Y  AS +L  +   +      S  + +++LWG+L S IL Q W    E ++ + + I  V + +                  ++  + LQ RTWL+HW LF Y   PE    R+   DK+     L  PA             Y  A+Q   P +LRY+TT VI +K        R++ V+ +++ +I+QE+Y Y+DPIT+F++CLYV FDFDGAQ+KL+ C  VL ND+FL      F+  AR  IFET+CRIH  I INML +KL M   EAE+WIV+LI +++L AK+DS+  +V M T S S YQQV+++T+ L      L    +K
Sbjct:    1 MAEFDLTAKIGQYLDRH-LVFP--LLEFLSVQEIYDE-KDMLQGKLDLLSNTNMVDFAMDVYKTLNEDQEVPQTLKEKRADVVNQ----LKRLQQDTEPIIEIFENADVREHIQS-ARDSRQLFEYLEKNHGFKHDNLSLLYDYAKFQYDCGNYSGASEYLYFHRTLVPP----SDPKSTSSLWGKLASEILMQNWEGALEDLNKLQEVIDPVDKMDS---------------HFITPLQSLQQRTWLIHWSLFVYFNHPE---GRDLIIDKF-----LYQPA-------------YLNAIQTMCPHILRYLTTAVITNK-------SRRRSVLLDLVRVIQQESYTYRDPITEFVECLYVNFDFDGAQQKLRECEKVLVNDFFLVACLQDFIENARLFIFETFCRIHNCISINMLAEKLNMLPDEAERWIVNLIRNARLDAKLDSKLGHVVMGTQSVSPYQQVIEKTKNLIHRNQLLAVSLEK 428          
BLAST of NO09G02920 vs. NCBI_GenBank
Match: XP_022798128.1 (eukaryotic translation initiation factor 3 subunit E [Stylophora pistillata])

HSP 1 Score: 245.4 bits (625), Expect = 4.400e-61
Identity = 172/498 (34.54%), Postives = 259/498 (52.01%), Query Frame = 0
Query:    1 MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQKTKNTDGEVRALEEL---EEYPSPELEARS------KALDDEEEVLREAAGDA---LDMFSIDDMTKIKEYVTAGATDPPERLECKEKLLAALPAYYDYAKFKYERGEYDDASIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAIDKHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYPATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPWLLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQCLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRIHQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHSPSVYQQVLDRTERLASSTFRLGTDTQKIFGQPMGGY 487
            MAE+DLT ++  F D H LV P    +FL  +  Y +  ++++ K+ LL  T   D  +   + L   ++ P   ++ R+      K L  + E + +   D      M +  D  ++ EY+       PE L+            Y YAKF+YE G Y  A+ +L  Y   +      +T+   NALWG+LGS IL Q W    E ++ + K ++  K +   +                   + LQ RTWL+HW LF +   P+            + I++L                +Y  A+Q   P +LRY+TT VI +K        R++ V+K+++ +I+QE+Y Y+DPIT+FL+CLYV FDFDGAQ+KL+ C  VL ND+FL    D F+  AR  IFET+CRIHQ I I+ML +KL M+  EAE+WIV+LI +++L AKIDS+  +V M T +PSVYQQV+++T+ + S T  L  + +K       GY
Sbjct:    1 MAEHDLTARMGCFLDRH-LVFP--LLEFLSVKEIYDE-KELLKGKLDLLSNTNMVDFAMDVFKNLYPDQDVPEELVQKRTEVVTQLKYLQAQTEPIVKCFEDPEFNNQMQTTRDGRQLFEYLEKNHGIEPEMLD----------TLYKYAKFQYECGNYSGAAEYLYFYRVLVPGNDDRNTL---NALWGKLGSEILMQNWETALEDLNRL-KDVIESKNQAGTL-------------------QLLQERTWLIHWSLFVFFNHPKGR----------DLIIDLFL-----------YQPQYLNAIQTTCPHILRYLTTAVITNK--------RRRTVLKDLVKVIQQESYTYKDPITEFLECLYVNFDFDGAQQKLRECETVLLNDFFLVACLDDFIENARLFIFETFCRIHQCISISMLAEKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMGTQAPSVYQQVIEKTKGIMSRTQELARNIEKKLNVDKMGY 432          
The following BLAST results are available for this feature:
BLAST of NO09G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27525.11.800e-25387.73eukaryotic translation initiation factor 3 subunit... [more]
ODM98745.13.600e-6334.76Eukaryotic translation initiation factor 3 subunit... [more]
XP_001636266.13.000e-6235.45predicted protein [Nematostella vectensis] >A7RWP6... [more]
XP_011667358.13.900e-6235.74PREDICTED: eukaryotic translation initiation facto... [more]
XP_021950644.13.900e-6235.50eukaryotic translation initiation factor 3 subunit... [more]
XP_002735030.16.700e-6234.97PREDICTED: eukaryotic translation initiation facto... [more]
ORX93845.18.800e-6235.17eukaryotic translation initiation factor 3, subuni... [more]
XP_011667357.12.000e-6135.74PREDICTED: eukaryotic translation initiation facto... [more]
XP_011667356.12.600e-6135.54PREDICTED: eukaryotic translation initiation facto... [more]
XP_022798128.14.400e-6134.54eukaryotic translation initiation factor 3 subunit... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010825NSK010825Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02920.1NO09G02920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528153gene_4256Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100101g1gene3049Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02920.1NO09G02920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02920 ID=NO09G02920|Name=NO09G02920|organism=Nannochloropsis oceanica|type=gene|length=2181bp
TTATTAACTCAGCGCCTGTCTCACACAACCACCACAGAGCGAGGCGCCGG
CGGGTCTACCGCCCTCATACGAAGCTCTCCCCTCCGCGTCTTTTCCTCCC
TGCTGGACCATCGTCATATTTTCCTCCTCACAACACAACCATGGCGGAGT
ACGATCTCACGCACAAGATTGCACCCTTTGCGGACGTGCATTTCTTGGTG
CAGCCCGACGGTCCCTTTGACTTCTTGGTGGGGCAAGCCGCGTACTTCCA
AATTCCAGACGTCATGCGGGCCAAGGTGGCCTTGCTGCAAAAGACCAAGA
ACACCGACGGCGAAGTCCGTGCTCTGGAAGAACTGGAAGAATACCCTTCC
CCCGAGTTGGAAGCCCGGAGCAAGGCTTTGGATGACGAGGAGGAGGTCCT
GCGCGAAGCGGCGGGGGATGCCTTGGACATGTTTAGCATCGACGATATGA
CCAAAATCAAGGAATATGTCACGGCCGGGGCCACGGACCCCCCCGAGAGG
TTGGAGTGCAAGGAAAAGCTCCTGGCCGCCCTGCCGGCGTACTACGATTA
TGCTAAGTTTAAATACGAGCGAGGTGAATATGACGATGCCTCCATTTTTC
TCAACAACTACATCCAAGCCATCGGGGACCGTGCTGCCTTCTCCACAGTC
CGTTACTCCAATGCCTTGTGGGGACGACTCGGCTCCGCTATCCTCACTCA
ACAATGGCACCTAGTCAAGGAAGCTGTCGATGCGATCGACAAACACATCA
TGACAGTCAAGCGCCGCGAGGATGGCGTCCCCCCCACCAAACCAACCGCC
GCCGACCCCGACCCTATTCGCTCCATGTCTGACCGTGAAAAGCTTCAACT
CCGCACTTGGCTTCTCCACTGGTGCCTCTTCGCCTATCCCGCCACTCCCG
AAGAGGCCCGAAAGCGTGAGGATGCAGGCGACAAGTGGGAGAATATTTTG
GAGCTGATCTTTCCGGCGAACGACGATAAGCAAGGGCCAGGGAATGGCCC
GGATCGTTACAGGCAAGCTTTGCAGAACAATGCACCTTGGCTGCTGCGGT
ACATGACTACTATGGTTATTCTACACAAGCGCCCAGTGAGCGAGCGGTTC
AGGCGCAAGCAGGATGTCATCAAGGAGGTGATTTGGTTGATTGAACAAGA
GGCGTACAACTACCAAGATCCCATCACCCAATTCCTGCAGTGTTTGTATG
TGCGCTTCGACTTCGACGGCGCACAAGAGAAGCTCCAAGCGTGTTACCAC
GTCCTAAGGAATGATTACTTCTTGTCGGGGTGGGCGGACGCGTTTTTGAC
GGAGGCCAGACAGTTGATCTTCGAGACTTATTGCCGCATCCACCAAAAAA
TTGATATCAACATGCTGGGGCAGAAGCTGGGCATGTCCGCCGCCGAGGCC
GAGAAGTGGATCGTGGACCTGATCTTGGACTCTAAGCTTGTAGCGAAGAT
TGATTCGAGGGATAATTACGTGGAGATGGACACGCATTCGCCGTCGGTGT
ATCAGCAGgtgaaggatcaagggcgggaagtgagggagtgagagcggacg
gtgtggcggggggggaaggagagaggtcttcgacttttgccttgactggg
tggttagaaaaggaatatgtgtctgataatattctgcttctgtatgtctg
tatgcctgcctgattctcacattctcccccttcctcaccacgtccttttt
caaaacagGTGTTGGACCGCACGGAGCGACTGGCCTCGTCCACCTTCCGC
CTGGGCACGGACACGCAGAAAATCTTTGGGCAGCCCATGGGTGGCTATCC
CGATCGACGGGGTGGTGGAGGTGGAGGTCGAGGAGGGGAGGAGGGCGAGC
GGGGGGACAGGGGGGACCGTGGTGGGGGTCGTGGCGGTGGCCGGGGGGAG
GAGCGGCAGCCGTCGTTGAGGGCGCAAGGGTTGATGGATGGACAGCCGTC
AGAGAGGGACGAAAGGCGAGGAGTTGGCGGGCATGGAGGAGGAGGGGCAG
GGGGAGGGAGGGGTGTGCGAAGAGGCGGGAGTTAAGGATCATTTTGGGGT
GTGTAAGGGGAGGAGAGGCTGTTAGAATGGGGGAGTGGGAGGGAAAGTTA
GATGGGCGGAAGCGTCCGTGGAGCATCGAGAAAAGTGAAAAACAAAAGAA
AAGAAATTGTCGTGCAAGAAACGAAAGCGAT
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protein sequence of NO09G02920.1

>NO09G02920.1-protein ID=NO09G02920.1-protein|Name=NO09G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=565bp
MAEYDLTHKIAPFADVHFLVQPDGPFDFLVGQAAYFQIPDVMRAKVALLQ
KTKNTDGEVRALEELEEYPSPELEARSKALDDEEEVLREAAGDALDMFSI
DDMTKIKEYVTAGATDPPERLECKEKLLAALPAYYDYAKFKYERGEYDDA
SIFLNNYIQAIGDRAAFSTVRYSNALWGRLGSAILTQQWHLVKEAVDAID
KHIMTVKRREDGVPPTKPTAADPDPIRSMSDREKLQLRTWLLHWCLFAYP
ATPEEARKREDAGDKWENILELIFPANDDKQGPGNGPDRYRQALQNNAPW
LLRYMTTMVILHKRPVSERFRRKQDVIKEVIWLIEQEAYNYQDPITQFLQ
CLYVRFDFDGAQEKLQACYHVLRNDYFLSGWADAFLTEARQLIFETYCRI
HQKIDINMLGQKLGMSAAEAEKWIVDLILDSKLVAKIDSRDNYVEMDTHS
PSVYQQVLDRTERLASSTFRLGTDTQKIFGQPMGGYPDRRGGGGGGRGGE
EGERGDRGDRGGGRGGGRGEERQPSLRAQGLMDGQPSERDERRGVGGHGG
GGAGGGRGVRRGGS*
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Synonyms
Publications