NO09G02890, NO09G02890 (gene) Nannochloropsis oceanica

Overview
NameNO09G02890
Unique NameNO09G02890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1085
Alignment locationchr9:848556..849640 -

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Properties
Property NameValue
DescriptionHistone deacetylase superfamily
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:848556..849640 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Beta-lactamas-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO09G02890 vs. NCBI_GenBank
Match: EWM27517.1 (histone deacetylase superfamily [Nannochloropsis gaditana])

HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104
Identity = 188/281 (66.90%), Postives = 213/281 (75.80%), Query Frame = 0
Query:   42 RQWLSATGPQWTSLRAL-AGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPG-------------RGEINN-GEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSP---YFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGKYHGK 305
            RQWL + GP WTSLRAL A GGH   +  VE  VYSI T PK+GIGQRCLL+Q PG             RG+ ++ G G NVLWDCCAFLD++T++AV  LGGI KI+LSHPHFLGSC+TWSK FGD PI++H SDK W+TR  E +  P   Y  WEGEE    L P+LK+VRLGGHFPSSSVLL  S+ +D K V+F GDTILPVPHGRWCSFMYSFPNLLPLP F+VE I  KV  LP FDRLYGPFS+SSI GNAK+AVLESAQRYLDSLAGKYHGK
Sbjct:  451 RQWLPSDGPHWTSLRALSANGGHCTVVRPVEAAVYSIETQPKVGIGQRCLLLQQPGEESVQVSRVRGDKRGDRDDLGRGGNVLWDCCAFLDKATVQAVTELGGIQKIVLSHPHFLGSCVTWSKVFGDAPIYMHASDKHWVTRKDESRNPPSSRYSFWEGEEL--QLSPSLKVVRLGGHFPSSSVLLWASAPQDDKAVLFTGDTILPVPHGRWCSFMYSFPNLLPLPDFVVESILKKVTALPAFDRLYGPFSSSSIQGNAKDAVLESAQRYLDSLAGKYHGK 729          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_056471530.1 (hypothetical protein [Bacillus sp. FJAT-25509] >KQL39021.1 hypothetical protein AN960_11950 [Bacillus sp. FJAT-25509])

HSP 1 Score: 245.7 bits (626), Expect = 1.800e-61
Identity = 126/284 (44.37%), Postives = 176/284 (61.97%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGK 301
            IC TCG  Y  S +PP  C IC ++RQ+++  G  WT+L+++    ++N I   E N+ SIVT+PK GIGQ   L++          EG NVLWDC ++LD+ TIE +  LGGI+ I LSHPH+  S I W+K F DVP+++H+ D+EW+ R    K+     W GE  +  L   +K+ RLGGHF   +VL  ++  E  KG++  GD I  V    W SFMYS+PNL+PLPA  V++I   VEKL  FDR+Y  F    + GNAK+ V +SA+RY+++L GK
Sbjct:    5 ICTTCGVQYNKSIDPPKYCTICSEERQYINPHGQGWTTLQSMKDQNYQNIIRFEEDNLNSIVTSPKFGIGQTAYLIK---------NEGFNVLWDCVSYLDEKTIEEIKQLGGINAIALSHPHYYSSQIEWAKKF-DVPVYIHEDDQEWVMR----KSDKIIFWSGE--MLELNKGIKIHRLGGHFKGGAVLEWKAGNEH-KGILLTGDIIQVVADPEWVSFMYSYPNLIPLPAKKVKEISLAVEKL-TFDRIYNAFH-GIVKGNAKQVVYKSAKRYIEALDGK 269          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_068417703.1 (MBL fold metallo-hydrolase [Planctomyces sp. SH-PL62] >AMV39126.1 hypothetical protein VT85_16935 [Planctomyces sp. SH-PL62])

HSP 1 Score: 244.2 bits (622), Expect = 5.200e-61
Identity = 127/282 (45.04%), Postives = 166/282 (58.87%), Query Frame = 0
Query:   16 PICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSL 298
            PIC TCG  YG +   P  C IC+D+RQ++   G +WT+L AL   GH+N I   E+ + S VT PK GIGQR LL+Q P         G N+LWDC + +D+ TI AV  LGGI+ + +SHPH+  S I WS+AFG VP+ +H SD+ W+ RP          W GE     L  ++ L+R GGHF  ++VL     AE G+GV+ AGD +   P  R  SFMYS+PN +PLPA  V    A VE    FDR+YG  +   I  +AKEAV  SA RYL ++
Sbjct:    4 PICSTCGVQYGAASAGPQICMICEDERQYVGLEGQKWTTLEALR-SGHENVIKEEESRLSSFVTAPKFGIGQRALLLQSP---------GGNILWDCISLIDEKTISAVEDLGGIAAVAISHPHYYSSMIEWSRAFGGVPVHVHDSDRRWVARPAPA----VCYWTGESL--PLHDSITLIRCGGHFDGATVLHWPDGAE-GRGVILAGDVLQVCPDRRHVSFMYSYPNYIPLPAHAVRRAVAAVEPFA-FDRIYGFTTGLQIDHDAKEAVNRSADRYLKAI 267          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_098845476.1 (hypothetical protein [Bacillus sp. AFS055030] >PGL71843.1 hypothetical protein CN925_06455 [Bacillus sp. AFS055030])

HSP 1 Score: 243.4 bits (620), Expect = 8.900e-61
Identity = 125/283 (44.17%), Postives = 171/283 (60.42%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAG 300
            IC TCG  Y  S +PP  C IC D+RQ+++ +G  WT+L+++    ++N I   E N+YSIVT+PK GIGQ   L++          EG NVLWDC  FLD+ T E + +LGGI  I LSHPH+  S I W+K F DVP+++H+ D+EW+TR    K+     W GE    +L   +++ RLGGHF   +VL  ++  E  KG++  GD I  V    W SFMYS+PNL+PLP   V +I   VEKL  FDR+Y  F    +  NAK  V  SA+RY+++L G
Sbjct:    5 ICTTCGVQYNKSIDPPEYCIICSDERQYINLSGQSWTTLQSMKEQNYQNSIRYEEENLYSIVTSPKFGIGQTAYLIR---------NEGFNVLWDCVTFLDEKTFEEIKSLGGIDAIALSHPHYYSSQIEWAKRF-DVPVYIHEDDQEWVTR----KSDKIIFWSGESL--NLKEGIEIHRLGGHFKGGAVLEWKAGNEQ-KGILLTGDIIQVVADHNWVSFMYSYPNLIPLPEKKVNEISLAVEKL-KFDRIYNAFH-GIVKENAKLVVNNSAKRYIEALNG 268          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_098917081.1 (hypothetical protein [Bacillus pseudomycoides] >PEA54719.1 hypothetical protein CON64_11445 [Bacillus pseudomycoides])

HSP 1 Score: 242.7 bits (618), Expect = 1.500e-60
Identity = 126/285 (44.21%), Postives = 173/285 (60.70%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRAL-AGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGK 301
            +C TCG  Y     PP  C IC ++RQ+++  G  WT+L +L     +KNEI + E N+YSI T PK  IGQ   LVQ          +  N+LWDC  ++D+ T+E +N LGGI  I LSHPH+  + + W++ F DVPI++H+ DKEW+ RP E        W GE     L   L L RLGGHF   SVL  + + +DG+GV+  GD I  V   RW SFMYS+PNL+PLPA+ V+++   V++L  F+RLY  F    + GNA EAV +SA+RY+++L GK
Sbjct:    5 VCITCGVQYPLFDEPPVNCVICNEERQYVNPMGQSWTTLDSLQQSKTYKNEIVKEEENLYSITTKPKFAIGQNAYLVQ---------TDIYNLLWDCVTYIDEETVERINELGGIHGIALSHPHYYSTQVEWAERF-DVPIYIHEDDKEWVIRPSE----RIIFWSGESL--QLSENLTLYRLGGHFRGGSVLHWK-NGDDGRGVLLTGDIIQVVADSRWVSFMYSYPNLIPLPAWKVKEMAENVKEL-KFNRLYNAFH-GIVQGNANEAVQKSAKRYIEALDGK 270          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_098427212.1 (hypothetical protein [Bacillus sp. AFS088145] >PFH89058.1 hypothetical protein COI44_06645 [Bacillus sp. AFS088145])

HSP 1 Score: 242.7 bits (618), Expect = 1.500e-60
Identity = 126/283 (44.52%), Postives = 172/283 (60.78%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAG 300
            IC TCG  Y  S +PP  C IC ++RQ+++  G  WT+L++L    ++N I   E N+YSIVT+PK GIGQ   L++          EG NVLWDC  +LD+ TIE +  LGGI+ I LSHPH+  S I W++ F DVP+++HK D+EW+TR    K+     W GE     L   +++ RLGGHF   +VL  ++  E  KG++  GD I  V    W SFMYS+PNL+PLPA  V++I   VEKL  FDR+Y  F    +  NAK  V  SA+RY+++L G
Sbjct:    5 ICTTCGVQYNKSIDPPEYCIICSEERQYINPNGQSWTTLQSLKEQNYQNMIRFEEENLYSIVTSPKFGIGQTAYLIK---------DEGFNVLWDCVTYLDEKTIEEIMRLGGINAIALSHPHYYSSQIEWAERF-DVPVYIHKDDQEWVTR----KSDKIIFWSGESL--ELNKGIQIHRLGGHFKGGAVLEWKAGNEQ-KGILLTGDIIQVVADQNWVSFMYSYPNLIPLPAKKVKEISLAVEKL-TFDRIYNAFH-GIVKENAKLVVYNSAKRYIEALDG 268          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_069802834.1 (MBL fold metallo-hydrolase [Thermogemmatispora onikobensis])

HSP 1 Score: 239.6 bits (610), Expect = 1.300e-59
Identity = 125/287 (43.55%), Postives = 167/287 (58.19%), Query Frame = 0
Query:   14 DLPICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGK 301
            +L IC TCG  + P   PP  C IC D RQ++   G +WT+L  L   G +N +   E  +  I + P   IGQR LLVQ P        EG N+LWDC +FLD+ T+E V ALGG+  I +SHPH+  S + W++ FG VP++LH +D+ W+  P E        W GE+    L   L L+RLGGHFP  +VL     AE G+G + +GD I  V   RW SFMYS+PNL+PLPA  VE I+A +     F+RLYG +    +   A  AV+ SA+RYL +LAG+
Sbjct:    2 ELWICVTCGTQFAPGEEPPPECPICLDQRQYVGYEGQRWTTLAELRASGLRNVLKEHEPRLIGIGSEPTFAIGQRALLVQSP--------EG-NLLWDCISFLDEETVEQVTALGGLRAIAISHPHYYSSMVEWAERFG-VPVYLHAADQRWVMCPSE----RLVFWSGEKL--ELFAGLTLIRLGGHFPGGTVLYWPDGAE-GRGALLSGDIIQVVADRRWVSFMYSYPNLIPLPASEVERIRAMIAPY-RFERLYGAWFERVVWSQAHAAVMRSAERYLHALAGQ 270          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_098862399.1 (hypothetical protein [Bacillus sp. AFS053548] >PGM52722.1 hypothetical protein CN946_18040 [Bacillus sp. AFS053548])

HSP 1 Score: 238.8 bits (608), Expect = 2.200e-59
Identity = 125/283 (44.17%), Postives = 171/283 (60.42%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAG 300
            IC TCG  Y  S +PP  C IC ++RQ+++ +G  WT+L+++    ++N I   E N+YSIVT PK GIGQ   L++          EG NVLWDC  +LD  TIE +  LGGI+ I LSHPH+  S I W++ F DVP+++HK D+EW+TR    K+     W GE     L   +++ RLGGHF   +VL  ++  E  KG++  GD I  V    W SFMYS+PNL+PLPA  V++I   VEKL  FDR+Y  F    +  NAK  V  SA+RY+++L G
Sbjct:    5 ICTTCGVQYNKSIDPPEYCIICSEERQYINPSGQSWTTLQSMKEQNYQNMIRFEEENLYSIVTRPKFGIGQTAYLIK---------NEGFNVLWDCVTYLDGKTIEEIMRLGGINAIALSHPHYYSSQIEWAERF-DVPLYIHKDDQEWVTR----KSDKIKFWSGESL--ELNKGIQIHRLGGHFKGGAVLEWKAGNEQ-KGILLTGDIIQVVADQNWVSFMYSYPNLIPLPAKKVKEISLAVEKL-TFDRIYNAFH-GIVKENAKLVVYNSAKRYIEALDG 268          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_088014182.1 (hypothetical protein [Bacillus acidiceler])

HSP 1 Score: 238.4 bits (607), Expect = 2.900e-59
Identity = 124/284 (43.66%), Postives = 173/284 (60.92%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGK 301
            IC TCG  Y  S +PP  C IC ++RQ+++ +G  WT+L+++    ++N I   E N+YSIVT+PK GIGQ   L++          EG NVLWDC  +LD+ TIE +  LGGI+ I LSHPH+  S I W++ F DV +++H+ D+EWITR    K+     W GE     L   +++ RLGGHF   +VL  ++     KG++  GD I  V    W SFMYS+PNL+PLPA  V++I   VEKL  FDR+Y  F    +  NAK  V +SA+RY+++L GK
Sbjct:    5 ICTTCGVQYNKSIDPPEYCIICSEERQYINPSGQSWTTLQSMKDENYQNIIRFEEENLYSIVTSPKFGIGQTAYLIK---------NEGFNVLWDCVTYLDEKTIEGIMRLGGINAIALSHPHYYSSQIEWAERF-DVSVYIHEDDQEWITR----KSDKIIFWSGESL--ELNKGIQIHRLGGHFKGGAVLEWKAGNVQ-KGILLTGDIIQVVADPNWVSFMYSYPNLIPLPAKKVKEISLAVEKL-TFDRIYNAFH-GIVKENAKLVVYKSAKRYIEALDGK 269          
BLAST of NO09G02890 vs. NCBI_GenBank
Match: WP_098234430.1 (hypothetical protein [Bacillus sp. AFS001701] >PET44191.1 hypothetical protein CN514_22155 [Bacillus sp. AFS001701])

HSP 1 Score: 238.4 bits (607), Expect = 2.900e-59
Identity = 123/284 (43.31%), Postives = 173/284 (60.92%), Query Frame = 0
Query:   17 ICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGPQWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEINNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKAFGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGGHFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPAFIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGK 301
            IC TCG  Y  S +PP  C IC ++RQ+++ +G  WT+L+++    ++N I   E N+YSIVT PK GIGQ   L++          EG NVLWDC A+LD+ TIE +  LGGI+ I LSHPH+  S I W++ F +VP+++H+ D+EW+TR    K+     W GE     L   +++ RLGGHF   +VL  ++  +   G++  GD I  V    W SFMYS+PNL+PLPA  V++I   VEKL  FDR+Y  F    +  NAK  V  SA+RY+++L GK
Sbjct:    5 ICTTCGVQYNKSIDPPEYCIICSEERQYINPSGQSWTTLQSMKEQNYQNMIRFEEENLYSIVTKPKFGIGQTAYLIK---------NEGFNVLWDCVAYLDEKTIEEIMRLGGINAIALSHPHYYSSQIEWAERF-NVPVYIHEDDQEWVTR----KSDKIIFWSGESL--ELNKGIQIHRLGGHFKGGAVLEWKAGNKQ-NGILLTGDIIQVVADPNWVSFMYSYPNLIPLPAKKVKEISLAVEKL-TFDRIYNAFH-GIVKENAKLVVYNSAKRYIEALDGK 269          
The following BLAST results are available for this feature:
BLAST of NO09G02890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27517.12.200e-10466.90histone deacetylase superfamily [Nannochloropsis g... [more]
WP_056471530.11.800e-6144.37hypothetical protein [Bacillus sp. FJAT-25509] >KQ... [more]
WP_068417703.15.200e-6145.04MBL fold metallo-hydrolase [Planctomyces sp. SH-PL... [more]
WP_098845476.18.900e-6144.17hypothetical protein [Bacillus sp. AFS055030] >PGL... [more]
WP_098917081.11.500e-6044.21hypothetical protein [Bacillus pseudomycoides] >PE... [more]
WP_098427212.11.500e-6044.52hypothetical protein [Bacillus sp. AFS088145] >PFH... [more]
WP_069802834.11.300e-5943.55MBL fold metallo-hydrolase [Thermogemmatispora oni... [more]
WP_098862399.12.200e-5944.17hypothetical protein [Bacillus sp. AFS053548] >PGM... [more]
WP_088014182.12.900e-5943.66hypothetical protein [Bacillus acidiceler][more]
WP_098234430.12.900e-5943.31hypothetical protein [Bacillus sp. AFS001701] >PET... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010821NSK010821Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02890.1NO09G02890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588530gene_4260Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100101g3gene3047Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02890.1NO09G02890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02890 ID=NO09G02890|Name=NO09G02890|organism=Nannochloropsis oceanica|type=gene|length=1085bp
ATGGCCAGCCCTCCTCCCTCCCCTTTGGAGAGTGATGATGATCTGCCTAT
CTGCTGTACTTGTGGAAATGCCTACGGACCTTCCCCAAATCCTCCTTCGA
CGTGCAAGATTTGCAAAGACGACAGgtatgtattttctgggtatcctttg
catctgtctcttcagtacattaagcaagctatgatgggcagtcatgggtc
ttatcccatcaacaaaattttgtggcatagatctgtcttctatgcttttt
cctccttgtcatacagtcacccatactttcccgaaaacatcatagGCAAT
GGCTGTCAGCAACAGGGCCCCAATGGACGAGTCTCCGCGCCCTAGCGGGG
GGGGGGCACAAAAATGAGATTGCCCGGGTAGAAACCAATGTGTACAGCAT
CGTTACTACCCCAAAGATAGGAATAGGACAGCGGTGTCTGTTGGTGCAGT
ATCCCGGACGTGGAGAAATAAATAATGGGGAAGGAGAGAATGTATTGTGG
GATTGTTGTGCTTTCCTGGACCAGTCCACCATTGAGGCCGTGAACGCATT
GGGTGGGATTTCGAAGATTATTTTGTCACACCCACATTTTCTGGGCTCGT
GCATTACGTGGAGCAAGGCTTTTGGAGATGTGCCTATCTTCCTGCATAAG
AGCGACAAAGAGTGGATCACCCGGCCTGTTGAGGGCAAAACGTCGCCTTA
TTTTCTATGGGAGGGAGAGGAGACTTTGAGTTCTTTATGCCCAACCCTTA
AGCTCGTGCGCCTGGGCGGTCATTTTCCTTCCTCATCTGTGTTGCTCCTT
GAGTCGTCGGCGGAAGACGGGAAGGGTGTCGTGTTCGCAGGCGATACTAT
TCTGCCTGTACCCCATGGTCGTTGGTGCTCGTTCATGTATAGCTTTCCCA
ATCTTTTGCCTTTGCCTGCTTTTATCGTAGAGGATATCAAGGCAAAGGTG
GAGAAGTTGCCTGATTTTGATAGGCTGTACGGCCCTTTTTCAACCTCGTC
TATATTGGGAAATGCAAAGGAGGCGGTGTTAGAAAGTGCGCAGCGGTATC
TGGATTCCTTGGCGGGAAAGTATCACGGCAAGTAA
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protein sequence of NO09G02890.1

>NO09G02890.1-protein ID=NO09G02890.1-protein|Name=NO09G02890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=305bp
MASPPPSPLESDDDLPICCTCGNAYGPSPNPPSTCKICKDDRQWLSATGP
QWTSLRALAGGGHKNEIARVETNVYSIVTTPKIGIGQRCLLVQYPGRGEI
NNGEGENVLWDCCAFLDQSTIEAVNALGGISKIILSHPHFLGSCITWSKA
FGDVPIFLHKSDKEWITRPVEGKTSPYFLWEGEETLSSLCPTLKLVRLGG
HFPSSSVLLLESSAEDGKGVVFAGDTILPVPHGRWCSFMYSFPNLLPLPA
FIVEDIKAKVEKLPDFDRLYGPFSTSSILGNAKEAVLESAQRYLDSLAGK
YHGK*
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Synonyms
Publications