NO09G02790, NO09G02790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO09G02790 vs. NCBI_GenBank
Match: EWM27516.1 (hypothetical protein Naga_100101g13 [Nannochloropsis gaditana]) HSP 1 Score: 565.5 bits (1456), Expect = 2.600e-157 Identity = 336/788 (42.64%), Postives = 456/788 (57.87%), Query Frame = 0 Query: 1 MAPRSVVLTT-RVILAVLFMNAFIVGTLHYRHTVQHEDGTPVLYNTLSADELPPG------VANLRGT-RTSTLQDDSKQLRQNDFTADRGPRTRRYLVVIPLIGLKVDDRASHESERLTLKAWDALANHISSLRDEEHEIELRVVGMVENTAHCDSRLFGPSADLLSSGAASCVTLDLSCGHPDFDGVLTMDCILNMSLEIGEVWEADVYILANGDVVFTPTLTEAIDFALDTFGDGKSLATSPPHFPITASLSMREVEKSVTEAKKKIEPPPVSSTXXXXXXFSTLSTSLPTQPSHGFVMVGRRMDLSVALPKNTDDPPLTEDDLLHSDIKVRLHPATGIDYFAFTPNIIPRTFPPYLVGRWRWDNALLIHFLSSNAASIDASEVVHALHIGMGSFDSASHAARPGGQYNDDIATNMTGSRLTLGRIDFTKYILKQREMTEEEKEEAKRQQHRLSLEVERRSQPLGEAQLAALRVTDKSSFADDNSGDQQRQQ--QTKVKGGKTVFLLPVQAGEKALALEWVRWARGMKIDNYLLLAADRSEALALECILATNXXXXXXXXXXXSRGGEVVWMDPGKLRLRGWDGSKAYFEQKTSGRASPAVLALATGQLIERLLRLDLAVVLLPSLLPS----------------TSLMSSSVQALLRKENDVFQKDGRVMTALVASLLSIRDEEACDVTLWEEGQVKIDKINAAQTTAHGIQETVFSDENEQRPLPFAYALFQPTSTVLKGWEVVLSCLEEDVRHTKSQQGLCLTKVISAACRESIPSAAAPSY 763 MA S++++T + +L ++AF+ G Y + +HE G P ++++ A E+ P + +LRG + R+ + + RR+L IPL+GLK DD S ESERL L+AW+ALANH+ + + +ELRVVGMVE+ ++CD RLFGPSA L SS A SC+TL SC T+DCI ++ +G+ + A+VYILANGDVVFTPT TEAI FAL+TFG+G PP +RE E+ V + + PP S++ S GFV+VGRR+D++V++PK DDPPLT +DLL D+ VRLHP TGIDYFAFT N++PR+FPP+L+GRWRWDN LL+HFL S ASIDA+EVVHALHIGM FDSA HA R G YND +A + GS LGR DFT Y+LK M EEE E A H L+L +ERRS PL QLA LRV + FA N+ ++R Q GKT+FLLPV AGE A A+EW WA M + NYL +AA R+++ A+E LA +GGEV+ MDP +L + GW GSK YF QK SG AS AVL TG L++RLLRL L+VVL+P+L S + A ++ + + GR ++ S++ D+ ACDV LWEE + + H + S E + F YA + +S ++K W+ V +CL EDVR +KS++G C + + +C +P+ + +Y Sbjct: 1 MALNSILVSTLGAVSVILVLSAFVTGGTFYNYIARHEQGIPEMFDS-KASEVSPSYSTLSRLPSLRGRYAVDKMAGSGSAPRRQPAKTENTSQVRRFLAFIPLLGLKNDDWGSRESERLVLEAWNALANHVRLMNE---SVELRVVGMVEDASYCDPRLFGPSASLASS-AVSCLTLGPSCNQSGQKSAPTLDCIFEVATRVGDAYGANVYILANGDVVFTPTFTEAIAFALNTFGNG------PP---------VREGEEGVAPSPRLTLQPPASASGASGFPPPCAEAS----QHEGFVLVGRRLDMNVSIPKVPDDPPLTAEDLLAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSKGASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAASTAGSAHKLGRSDFTTYVLKDGGMPEEEDEVA---PHHLALRLERRSHPLIHGQLAGLRVAAR-GFAFPNASHEERNAHVQADENSGKTIFLLPVPAGEVASAMEWACWAGDMGLTNYLFVAASRNDSCAIEAALAV--------INKGRKGGEVLHMDPSQLTIAGWGGSKPYFNQKKSGIASRAVLDYGTGALMQRLLRLGLSVVLVPTLXXXXXXXXXXXXXXXXXXLPSFWGKNADAKMKGD----EGTGRTSQEVIQSVMQASDDAACDVILWEETHTSAPG-HTDTLSKHTYTKESSSKEKADKRANFLYARVEASSQIMKNWDTVFNCLTEDVRSSKSKRGWCFAE-LKTSCHHVVPAVSVSNY 746
BLAST of NO09G02790 vs. NCBI_GenBank
Match: XP_009492643.1 (hypothetical protein H696_00498 [Fonticula alba] >KCV72935.1 hypothetical protein H696_00498 [Fonticula alba]) HSP 1 Score: 69.3 bits (168), Expect = 5.800e-8 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 294 MVGRRMDLSVALPKNTDDPPLTEDDLLHSDIKVRLHPATGIDYFAFTPNIIPRTFPPYLVGRWRWDNALLIHFL-SSNAASIDASEVVHALHIGMGSFDSASHAARPGGQYNDDIATNMTGSRLTLGRIDFTKYIL 429 MVG+R+D+ + ++P ED + + H GIDYF + R PP++VGR RWDN LL F+ + NAA++DA+EVV A+H+ SH +R G YN ++ + LG ++ Y L Sbjct: 1 MVGQRIDILYPRLIDFNNPMWREDFKRTVERYGKTHGKYGIDYFLYRTR-YARPMPPFIVGRVRWDNWLLAQFIGNQNAAAVDATEVVFAVHLNHMKV-GGSH-SRSGTDYNINLTKSDAVDPKKLGDVESCDYYL 133
BLAST of NO09G02790 vs. NCBI_GenBank
Match: XP_009492639.1 (hypothetical protein, variant 4 [Fonticula alba] >KCV72939.1 hypothetical protein, variant 4 [Fonticula alba]) HSP 1 Score: 69.3 bits (168), Expect = 5.800e-8 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 294 MVGRRMDLSVALPKNTDDPPLTEDDLLHSDIKVRLHPATGIDYFAFTPNIIPRTFPPYLVGRWRWDNALLIHFL-SSNAASIDASEVVHALHIGMGSFDSASHAARPGGQYNDDIATNMTGSRLTLGRIDFTKYIL 429 MVG+R+D+ + ++P ED + + H GIDYF + R PP++VGR RWDN LL F+ + NAA++DA+EVV A+H+ SH +R G YN ++ + LG ++ Y L Sbjct: 1 MVGQRIDILYPRLIDFNNPMWREDFKRTVERYGKTHGKYGIDYFLYRTR-YARPMPPFIVGRVRWDNWLLAQFIGNQNAAAVDATEVVFAVHLNHMKV-GGSH-SRSGTDYNINLTKSDAVDPKKLGDVESCDYYL 133
BLAST of NO09G02790 vs. NCBI_GenBank
Match: OGO00879.1 (hypothetical protein A2Y90_02810 [Chloroflexi bacterium RBG_13_52_12]) HSP 1 Score: 65.5 bits (158), Expect = 8.400e-7 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0 Query: 292 FVMVGRRMDLSVALPKNTDDPPLTEDDLLHSDIKVRLHPATGIDYFAFTPNIIPRTFPPYLVGRWRWDNALLIHFLSSNAASIDASEVVHALH 385 F++VGRR D+ + P + + P + + + +LHP +GIDYF F P + R PP+ VGR WDN L+ IDA+ V+ A+H Sbjct: 110 FLIVGRRWDIDIKEPLDFNKPDWESNLRVRVTGEGKLHPPSGIDYFTF-PRGLYRDIPPFAVGRTAWDNWLIYRARVMKLPVIDATRVITAIH 201 The following BLAST results are available for this feature:
BLAST of NO09G02790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02790 ID=NO09G02790|Name=NO09G02790|organism=Nannochloropsis oceanica|type=gene|length=2292bpback to top protein sequence of NO09G02790.1 >NO09G02790.1-protein ID=NO09G02790.1-protein|Name=NO09G02790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=764bpback to top Synonyms
Publications
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