NO09G02310, NO09G02310 (gene) Nannochloropsis oceanica

Overview
NameNO09G02310
Unique NameNO09G02310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2975
Alignment locationchr9:693285..696259 +

Link to JBrowse

Properties
Property NameValue
DescriptionGeneral transcription factor polypeptide 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:693285..696259 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019136TF_IIIC_su-5
Vocabulary: Biological Process
TermDefinition
GO:0006384transcription initiation from RNA polymerase III promoter
Vocabulary: Cellular Component
TermDefinition
GO:0000127transcription factor TFIIIC complex
Homology
BLAST of NO09G02310 vs. NCBI_GenBank
Match: EWM27531.1 (general transcription factor polypeptide 5 [Nannochloropsis gaditana])

HSP 1 Score: 601.3 bits (1549), Expect = 4.100e-168
Identity = 431/713 (60.45%), Postives = 473/713 (66.34%), Query Frame = 0
Query:   98 SSADDPSTVRLLTRQTGKPLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTGDRTVVAKEVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLEIVPSSFVPVAHAGNYAYTSLKSSALANQDTARRQGVVIKFGCPIPKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRT------------------------------------------RGGREMWQRKALESKFEGDDL-HAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLEKLKTSYGEVWKKVRAEAGREDEEEEGV------------------------EELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKGGREEGALSPGEMILEAEARRGEEVVLPE----RGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARQLERLFGQPGRRTVDRARANTAAVTRGRTRHQGGDEDKE--DDLGRTFVIPLTAGDVQNASSIRLLGGYQGADYS 738
            +S  D +TVRL T + G+PLKLKRLLAVDLPVLCS PMTAVSMLGG+DRLSAACTG  RKL F FRP D+LSIP+ SQ KIP+SRLLLRVR+R+   TG R  V  EVVGT+STTFQF  LADFQYLTTQAFLP GT D+VS+ RLEIVP SF+PVAHAGNYAY SLKSSALA+ DTARRQGVVI++GCPIPKAPPAMLVNRPRRR EKYGQVLEKLQALFDR                                           RGGREMWQRKALES+FE + L HAFLELLRVVAYNMSNGPWRG WV+YGYDPS D VAR YQALDVRWKEAGLEK+K +Y +V +K   + G     +E                           EL+LFGLPVRRQMVFQLCDLG ASLQ LVL +PRKA C+ QGGWFRLSDL  LR +IKRYLS +VAECVRTGS+E V        G EEGALS   MI EAEARRG EVV  E    +G+G                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXXX G R L  L GQP    +  +R +      GR    G  E+ E  D+LG  FVIPLTAG+++NASSIRLLGGYQG DYS
Sbjct:   60 TSKKDHATVRLETSKPGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQRYAVHTEVVGTVSTTFQFRCLADFQYLTTQAFLPPGTPDLVSQARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLEKVKRAYEQVRRKGEGKRGDGAAAKEXXXXXXXXXXXXXXXXXXXXXXXRTGSELQLFGLPVRRQMVFQLCDLGGASLQELVLGLPRKALCSPQGGWFRLSDLNRLRVRIKRYLSSRVAECVRTGSLEAVV-------GPEEGALSSSAMIKEAEARRGREVVWREDDFKKGAG------------------------VDRDQEGWPERQGGKAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSEWEDDRELDGGEGXXXXXXXXXXXXXXXXXRGLRHLGDLLGQP-MGGIKSSRGDRRTARAGRQSSGGRVEEVEDTDELGGNFVIPLTAGEMENASSIRLLGGYQGGDYS 740          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_015222702.1 (PREDICTED: general transcription factor 3C polypeptide 5 [Lepisosteus oculatus])

HSP 1 Score: 120.2 bits (300), Expect = 2.800e-23
Identity = 128/472 (27.12%), Postives = 199/472 (42.16%), Query Frame = 0
Query:  120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLR--------KDGTTGDRTVVAKEVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLEIVPSS----------FVP------------------VAHAGNYAYTSLKSSALANQDTARR--QGVVIKF-GCPIPKAPPAMLVNRPRR---RLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWK----------EAGLEKLKTSYG-----EVWKKVRAEAGREDEEEEGVEEL-----------------KLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGWF--RLSD--LTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKGGREEG 513
            +RL+ V+ P    S    +  +GG + +S     ++R+L  YFRP D    PV    + PS+ LLLRVR R          G + ++  ++ E++G I TT++F  +ADFQYL   A  P GT   +    L   P            F+P                  + H   Y +  L S  L     ARR    + + F    +P  P    V   +R     +K+ +  E+++ LF++    R +W + A++   E       L LL  VAY M  GPWR  WV++GYDP  D  A++YQ LD R +          +  ++  +++Y       + K V   A  +D  E G   L                 +   LP  RQM +QLCDL   SL+R++     ++ ECT + GW   + SD    ++   IK+ +  K        +  P +GG  G    + G
Sbjct:   46 RRLVCVEHPCRVLSVDKILETVGGEEGMSRTYADSSRRLELYFRPRDPYCHPV-CGNRFPSTSLLLRVRRRVAKGRGNEASGDSPEQEQMSMEILGIIGTTYKFQGMADFQYLAVHA-QPDGTQTSLYDKILLRRPEKKEFFDQDVPLFIPPPIFSRLDNPVDYFYRPEIQHREGYTHPVLSSENLIGLSRARRPHNAIFVSFEDKDVPTEPLEAAVQNWQRFCAHPDKH-RAEEEIKQLFEK----RPVWSKNAVKCNMEIHPEKLKL-LLPFVAYYMLTGPWRSLWVQFGYDPRTDPKAKVYQVLDFRIRCGMKHGYTPNDMPVKAKRSTYNYSLPITINKTVPPPARLQDITEGGPSTLPRPAPCRYKLKESAYIFREGTLPPYRQMFYQLCDLEVESLKRIIHRNDGKETECTERDGWCLPKTSDELRDIMSNMIKQIIRSKRPALFPPKAQRPSSGGPRGALDMDSG 509          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_022128713.1 (general transcription factor 3C polypeptide 5 [Pieris rapae])

HSP 1 Score: 118.6 bits (296), Expect = 8.200e-23
Identity = 108/404 (26.73%), Postives = 174/404 (43.07%), Query Frame = 0
Query:  120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARK-LHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTG--DRTVVAKEVVGTISTTFQFTALADFQYLTT----------QAFLPVGTAD---VVSKTRLEIVPSSFVPVAHAGNYAYTSLK----SSALANQDTARRQGVVIKFGCP-----------IPKAPPAMLVNRPRRRLEKYGQVLEK---LQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGL-----EKLKTSYGEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKA-ECTAQGGWFRLSDLTVLRGKIKRYL 484
            K L+ V  P    +   A+  LGG+  +S  C+ +++K L   F+P++     +    K  +  +LL+V+++K    G   R VV   VVG +    +F ++ DFQYL            +  +P G  +   +       IVPSSF       NY+YT  K       L N D      +    G P           IP  P    VN    +     Q+ E+   +Q +FD     R +W    ++       ++  + +L  +A++  NGPW+  WVK+GYDP ++  AR YQ LD R + AG+     + L+T   +  KK+  E   E+   EG   L    LP +RQ+ +  CD+    +Q ++   P    +C  + GW   +     R  I +YL
Sbjct:    9 KELVCVLFPGNVKNEEKAIQYLGGLKTISQVCSPSSKKHLSLSFQPDNPYVNKINGDVKAVAG-VLLKVKVKKTKEDGKLKREVVNTSVVGQVKKIHKFESVCDFQYLPVSNGPNSECLLEKLIPGGLDEPKFLDEPAPFHIVPSSFTRFDKPINYSYTDKKINVTEEELLNADPDEVHKMRSDRGIPVRRFSFNLVDEIPTEPHEYFVNIKNSKASTNPQINEEYEIVQKMFDE----RPVWSFNHVKHHTRIRTVNLKV-ILPCIAFHNLNGPWKLLWVKFGYDPRKEPYARYYQMLDFRLRNAGIYSCVSQDLETVKRDRMKKMPLEEPSEEIIPEGALYLTPNSLPTQRQIFYMYCDIHLPEVQEILAVEPPSGYQCHPKRGWLAANTAHTCRDIIFKYL 406          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_019643558.1 (PREDICTED: general transcription factor 3C polypeptide 5-like [Branchiostoma belcheri])

HSP 1 Score: 116.3 bits (290), Expect = 4.000e-22
Identity = 129/485 (26.60%), Postives = 195/485 (40.21%), Query Frame = 0
Query:  116 PLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRV----RLRKDGTTGDRTVVAK-------------------------EVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLE---------------IVPSSFVPVAHAGNYAY------------TSLKSSALANQDTARRQGVVIKFG---CPIPKAPPAMLVNRPRRRLEKYG--QVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKE----------------------------AGLEKLKTSYGEVWK---KVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKG 508
            P+  K L  V+ P    +    +  LGG + +S A + ++R+L   FRP D    PV    + P+S LL+RV    R+RKD   G   V A                          EV+G + TT++F A+ADFQYL         T  +  +  LE               + P++F  +    NY Y             +L SS L     ARR    I F      +P  P    V+     +++Y     L +++ LF      R +W R AL+ +     L     LL + AY ++ GPWR  WVK+GYDP +D  A+ YQ LD R ++                              + ++K S G       + +    +ED E+E     +   LP  RQM +QLCDL    LQ ++      + +CT + GW   +    LR  I   +S K++  ++    +   GGR G G
Sbjct:    4 PINTKSLTCVEYPGRVKNVEKMLETLGGEENVSKAVSDSSRRLDLRFRPGDPYCRPVYGD-RFPTSSLLVRVRRTRRVRKDRAKGSEDVPASSSTGTMETPAPSTSSSQEERVTYNTEVLGIVDTTYRFQAMADFQYLPLHRTPDGRTVQLYDQLLLEGLEEQGFYQKDVPLFLPPATFSRIDTPQNYHYRKDPAHNYKNPMKALSSSNLIGVARARRPHNAIFFNFEELQVPTKPLDAAVD----HVDRYNLHSELAEIKKLFQE----RWIWSRNALQVR-TNIPLLRLKFLLPICAYYVATGPWRSLWVKFGYDPRKDPTAKQYQLLDFRIRQRPDAEQLAVKAKRSCFNYTLPTMMHKPLPQVVQIKDSSGAGSSGEGEAQDAKTKEDIEKEATYIFRPGMLPAYRQMFYQLCDLHDPRLQAIIHENDGGETDCTEKDGWCLPNTHAKLRDIISAEVS-KMSTIIKRD--KKSQGGRSGTG 475          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_020612436.1 (general transcription factor 3C polypeptide 5-like [Orbicella faveolata])

HSP 1 Score: 115.5 bits (288), Expect = 6.900e-22
Identity = 107/396 (27.02%), Postives = 167/396 (42.17%), Query Frame = 0
Query:  123 LAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRK----DGTTGDRTV-VAKEVVGTISTTFQFTALADFQYLTTQA--FL-PVGTADVVSK-TRLEIVPSSFVPVAHAGNYAYT---------------SLKSSALANQDT-ARRQGVVIKFGCPIPKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVR-WKEAGLEKL-------------------KTSYGEVWKK---VRAEAGREDEEEEGVEELKLF---GLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGW 467
            + V+ P         +  LGG + +S     + R+L   FRPED  +  V    + P++ LLLRV+ RK    +GT+    V   +E++G +  TF+F  +ADFQYL      FL  V  AD +++     + P  F    H   Y Y                 L    LA   T  RR    I     +P+ P         + +E   ++ + L     +    R +W R AL+            +LL V+AY   NGPWR  W + GYDP +D  A++YQ +D R     G + L                     S G + K+   V +E   +D++ E  +   +F    +P ++Q+ +Q+CDL    +QRLV     ++ EC  + GW
Sbjct:   31 VGVEYPGYIKDENHMLETLGGEETVSRTFFNSTRRLELSFRPEDPYA-HVVCADRFPTANLLLRVKRRKKKQREGTSQPEEVKYEQEILGIVGNTFKFGVMADFQYLAPDIPDFLKQVTDADALNQDVPFHLQPPVFTRFDHPTVYNYNPEPQTSRGCKANQGDDLDEERLAGTRTRLRRPAYAIAANFNMPEVP----ATANPKAVEVANKIKDGLMETIKKLFSNRPIWSRAALQCHLTSASQERMKQLLAVIAYYWLNGPWRTLWTRIGYDPRKDPSAKIYQMVDFRVGSRRGAKNLPIKAKRDTSSFILPNLVGKTASQGSLVKEAVMVSSENKPDDKQSEEQDLPYVFTPNKMPKQKQLFYQVCDLHDPEIQRLVSRNDGQEEECHERDGW 421          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: PCG68642.1 (hypothetical protein B5V51_5009 [Heliothis virescens])

HSP 1 Score: 115.5 bits (288), Expect = 6.900e-22
Identity = 109/408 (26.72%), Postives = 179/408 (43.87%), Query Frame = 0
Query:  120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARK-LHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRK--DGTTGDRTVVAKEVVGTISTTFQFTALADFQYL--------------TTQAFLPVG--TAD-VVSKTRLEIVPSSFVPVAHAGNYAYTSLK---------SSALANQDTARRQGVVIKFGCPI----PKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKAL--ESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEA--------GLEKLKTSYGEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKA-ECTAQGGWFRLSDLTVLRGKIKRYL 484
            + L+ V  P +  +   A++ LGG+  +S   +  A+K L   F+PE+     + S GK  ++ +LL+V+++K  DGT   R VV+  VVG + T F+F +L DFQYL              + +  LP G  T D ++    L ++PSSF        Y YT  +           ++ N+    R   V  F   +    P  P    V +   +     +++E+ + +  +    R +W    +   +K     L  F+  L   A  M  GPW+  WV+YGYDP +D  AR+YQ LD R + A          E++ T    V ++   E   ED   EG    +    P +R + +Q CD+    ++ ++ A P     C  + GW   +   V R  + RY+
Sbjct:    7 RELVGVLFPGVVKNDEKAIACLGGIRNISQVYSSCAKKRLGLSFQPENPFIRKIYSTGK-KAAGVLLKVKVKKTRDGTEVKREVVSTTVVGCVKTMFRFESLCDFQYLAVHREGSNDSPLMCSLEKVLPSGLDTIDFMLQPAPLLLIPSSFTRQEKPITYTYTDKRYLDRSSPEQGDSVHNKTRTLRSSQVAPFMFNLIDDWPAEPHESYVKQKDLKCATMPRMIEEYETV-KKLLEERPIWSLNLIRFHTKIRLSSLKVFMPSL---ALYMKTGPWKSMWVRYGYDPRKDPGARIYQTLDFRLRHAAGVRSMIMSREEITTDRERVSRRKLTEQANED-IAEGSVYFRPGMTPTQRHIFYQYCDIQLPEVEEILAAEPPPGYMCHQKRGWLPPNTDEVCRDHMFRYV 408          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_021186004.1 (general transcription factor 3C polypeptide 5 [Helicoverpa armigera])

HSP 1 Score: 114.8 bits (286), Expect = 1.200e-21
Identity = 108/406 (26.60%), Postives = 184/406 (45.32%), Query Frame = 0
Query:  120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARK-LHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRK--DGTTGDRTVVAKEVVGTISTTFQFTALADFQYL--------------TTQAFLPVG--TAD-VVSKTRLEIVPSSFVPVAHAGNYAYTSLK-------SSALANQDTARRQGVVIKFGCPI----PKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKAL--ESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKE-AGLEKLKTSYGEVWKKVRAEAGRE---DEEEEGVEELKLF---GL-PVRRQMVFQLCDLGSASLQRLVLAVPRKA-ECTAQGGWFRLSDLTVLRGKIKRYL 484
            + L+ V  P +  +   A+S LGG+  +S   +  A+K L   ++PE+     + S GK  ++ +LL+V+++K  DGT   R VV+  +VG + T F+F ++ DFQYL              + +  LP G  T D ++    L ++PSSF  +     Y YT  +          + N+  + R   V  +   +    P  P    V +   + E   +++E+ + +  +    R +W    +   +K     L   +  L   A  M  GPWR  WV+YGYDP +D  AR+YQ LD R +  AG+  +     E+    R  AGR    D   E + E  ++   G+ P +R + +Q CD+    ++ ++ A P     C  + GW   +   + R  + RY+
Sbjct:    7 RELVGVLFPGIVKNDDKAISCLGGIRNISQVYSSYAKKRLGLSYQPENPFVRKIYSTGK-KAAGVLLKVKVKKTRDGTEVKREVVSTTIVGCVKTMFRFESMCDFQYLPVHREGSNDGPLTCSLEKVLPSGLDTIDFMLQPAPLLLIPSSFTRLEKPITYTYTDKRYPDRPDQGDNVHNKTRSLRSSQVAPYTFNLIDDWPSEPHESYVKQKDLKCESSPRMVEEYETV-KKLLEERPIWSLNLIRYHTKIRLSSLKIIMPSL---ALYMKTGPWRSMWVRYGYDPRKDPGARIYQTLDFRLRHAAGVRSMIVPREEITTD-RERAGRRKHADHASEDIAEGSVYFRPGMTPTQRHIFYQYCDIQLPEVEEILAAEPPPGYMCHQKRGWLPPNTDEICRDHMFRYV 406          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_002600174.1 (hypothetical protein BRAFLDRAFT_57181 [Branchiostoma floridae] >EEN56186.1 hypothetical protein BRAFLDRAFT_57181 [Branchiostoma floridae])

HSP 1 Score: 114.4 bits (285), Expect = 1.500e-21
Identity = 128/445 (28.76%), Postives = 192/445 (43.15%), Query Frame = 0
Query:  116 PLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRV----RLRKDG-TTGDRTVVAKEVVGTISTTFQFTALADFQYL---------TTQAF--LPVG---TADVVSK-TRLEIVPSSFVPVAHAGNYAY------------TSLKSSALANQDTARR--QGVVIKF-GCPIPKAP-PAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAG-----LEKLKTS----------------------------YGEVWKKVRAEA-GREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAE 490
            P+ ++ L  V+ P    +    +  LGG + +S A   ++R+L   FRP D    PV    + P+S LLLRV    R++K+     +R     EV+G + TT++F A+ADFQYL         T Q +  L +G     D   K   L + P++F  +    NY Y             +L SS L     ARR    + + F    +P  P    +V+  +  L  +G+ LE+L  LF      R +W R AL+ +  G  L     LL +  Y    GPWR  WVK+GYDP +D  A+ YQ LD R ++       L K K S                             G   +  R +   +ED E+E     +   LP  RQM +QLCDL    +Q LV     ++  C  + GW     L   + K++  +S +V++
Sbjct:    4 PINMRSLTCVEYPGRVKNVDKMLETLGGEENVSKAACDSSRRLDLRFRPGDPYCRPVYGD-RFPTSSLLLRVTRRRRVKKNRIKEEERVTYNTEVLGIVDTTYRFQAMADFQYLPLHRTPEGRTVQLYDQLLLGGLEGGDFYQKDVPLFVPPATFSRIDTPQNYHYKKDPTHNFKNPMKALSSSNLIGVARARRPHNAIFVNFEELHVPTKPLDGAVVHMDKYNL--HGE-LEELTKLFQE----RPIWSRNALQVR-SGIRLMRLKLLLPLCGYYAVTGPWRSLWVKFGYDPRKDPTAKQYQLLDFRVRQKPEAKGLLVKAKRSTFNYTLPTMTHKPQPQVVMMKDFADSPGAGSSGEGERQDGRSKEDLEKESTYLFRPGMLPAYRQMFYQLCDLHDPRIQALVHENDGKETTCMEKDGWC----LPNTKAKLRDIISAEVSK 435          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_004343519.1 (hypothetical protein CAOG_07645 [Capsaspora owczarzaki ATCC 30864] >KJE97200.1 hypothetical protein CAOG_007645 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 113.6 bits (283), Expect = 2.600e-21
Identity = 115/400 (28.75%), Postives = 178/400 (44.50%), Query Frame = 0
Query:  100 ADDP-STVRLLTRQTGKPLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTGDRTVVAKEVVGTISTTFQFTALADFQYLTT-----------QAFLPVGTADVVSKTRLEIVPSSFVPVAHAGNYAYTSLKSSALANQDT---ARRQGVVIKF--GCPIPKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKF--EGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLEKLKTSYGEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKAECTAQGGWFRLSDLTVLRGKIK 481
            AD+P +    L  + GKP  +  L A+  P    +   AV+ LGG   ++ A   N  +L   FRPE   S  V S    P + LL+R++    G + D T+    V G I+T+ QF ALA  Q L              +   VG A + S+T +++ P SF  +     Y +    S++ A+  T   A++  V + F    P P  PP  L     R   +  ++ ++L  LF      R +W R +L ++   EG      + LL   A+  S GPWR  WV++GYDP +D  AR YQ +D+R+  AG   L  S     ++  A        +  +        P +RQ   Q+CD+    +Q+L L  P  A    + G+FR  D+  +   +K
Sbjct:  210 ADEPVNRSAELGLEPGKP--IPTLFAIHYPGNVKNVDRAVTTLGGHAAVNKAAQLNG-ELQLNFRPEATFSAAVRSDKTRPCASLLVRLQAPTGGMSKDVTI---SVRGVIATSTQFRALAPVQILPAPPVPAQRSLEGASLDEVGDACIFSRTDMQLPPFSFTHIDQPRTYKFKPPISNSAASNSTAPMAQKSSVRVNFSLSAPQPTGPPRGLPT--TRNTAQSARLAKELHRLFQE----RPIWSRLSLITRLRREGISTSLVMPLLMSTAFRYSTGPWRTLWVRFGYDPRRDPNARSYQMIDLRF--AGNVPLAPSLKS--ERTAASIAASQFADVFIPNTS----PSQRQCCMQVCDILLRDVQQL-LKTPVPA-LDVRFGYFRRKDVEAIVTSVK 587          
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_023371927.1 (general transcription factor 3C polypeptide 5 isoform X2 [Otolemur garnettii])

HSP 1 Score: 112.1 bits (279), Expect = 7.600e-21
Identity = 116/408 (28.43%), Postives = 177/408 (43.38%), Query Frame = 0
Query:  113 TGKPLKLKR---LLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLR---KDGTTG----DRTVVAKEVVGTISTTFQFTALADFQYL---TTQAFLPVGTADVVSKTR------------LEIVPSSF----VPV--------AHAGNYAYTSLKSSALANQDTARR--QGVVIKFGCPIPKAPPAMLVNRPRRRLEK--YGQVLEKLQALFDRTRGGREMWQRKALESKF--EGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLE---------KLKTSYGEVWKK-VRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGW 467
            T  P++L+R   ++ V+ P +       VS LGG + +S      +++L  YFRP+D    PV    +  +S LLLR++ +   + G  G           E++G IST ++F  ++DFQYL   T  +       D V   R            L I P  F     PV         H   Y    +    L     ARR    + + F   +P  P    V+  +R        +V E+L+ LF+     R +W R A+++      D L     LL  +AY M  GPWR  W+++GYDP ++  A++YQ LD R +  GL+          LK   G      VR  A  + + ++ V   +  GLP  RQM +QLCDL    LQ+++      +  CT + GW
Sbjct:   12 TAVPVELRRERNMVCVEYPGVVRDVTKMVSTLGGEEGVSRIYADPSKRLELYFRPKDPYCHPV-CANRFSTSSLLLRIKKKTRQRKGVLGTEAHPEVTFGMEILGIISTVYKFQGMSDFQYLAMHTEASGKHTSMYDKVLMLRPEKQGFFHQELPLYIPPPIFSRLDTPVDYFYRPETQHREGYNNPPISGENLIGLSRARRPHNAIFVNFEDEVPSKPLEAAVHTWKRVCTNPMDRKVEEELRKLFEI----RPVWSRNAVKANISVHPDKLKV---LLPYLAYYMITGPWRSLWIRFGYDPRKNPEAKIYQVLDFRIR-CGLKYASQLVTMHDLKQGLGPSGTPGVRKLAPSKYKLKDTVYIFREGGLPPYRQMFYQLCDLNVEELQKIIHRNDGAETLCTERDGW 410          
The following BLAST results are available for this feature:
BLAST of NO09G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27531.14.100e-16860.45general transcription factor polypeptide 5 [Nannoc... [more]
XP_015222702.12.800e-2327.12PREDICTED: general transcription factor 3C polypep... [more]
XP_022128713.18.200e-2326.73general transcription factor 3C polypeptide 5 [Pie... [more]
XP_019643558.14.000e-2226.60PREDICTED: general transcription factor 3C polypep... [more]
XP_020612436.16.900e-2227.02general transcription factor 3C polypeptide 5-like... [more]
PCG68642.16.900e-2226.72hypothetical protein B5V51_5009 [Heliothis viresce... [more]
XP_021186004.11.200e-2126.60general transcription factor 3C polypeptide 5 [Hel... [more]
XP_002600174.11.500e-2128.76hypothetical protein BRAFLDRAFT_57181 [Branchiosto... [more]
XP_004343519.12.600e-2128.75hypothetical protein CAOG_07645 [Capsaspora owczar... [more]
XP_023371927.17.600e-2128.43general transcription factor 3C polypeptide 5 isof... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010749NSK010749Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02310.1NO09G02310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|21312gene_4319Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100015g43gene2996Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02310.1NO09G02310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02310 ID=NO09G02310|Name=NO09G02310|organism=Nannochloropsis oceanica|type=gene|length=2975bp
CTTCTGTCTTTTTGTTGCTTTAGTTCTTTCCCAAACCTCGGAGAAACGAT
GGGGGCTGACCCACGAGCCCGCCTAAGTAAGAGATCTCATGCATTCGAGT
AGTAAAAGTGAATTGGGGATCACCATGAGGTATTTTCCATTATTTACTCA
GACAACCGTGAATTTAATTCTTATACGGAAAACTGCTTCAGGGCACCTTT
CCGCTTTTGCCGCTGGGATTAATTCATGTAATTAACGCCGCCAAGCATTT
GTTTGGCACTGAACCTTCGTCCACACTTACACCGCCGCCTGAATGTGCAT
CATAGTCTCACACTCACTCTGCCCTATTGACTTTTTTGCCACCTCCAATA
CACAGGTGACGACGACGCAAGAGGTTAAAACGTATCTGCCCGAGGAACCA
TCCGCCTCAGCATCTGCAGCTGCCATGGATATTATTGCCAACGGCGAGCA
GAAGAATGGAGCACCACCAGCATCACTATCACTACCAGGCTGTGGTGCTG
GCGCGGCGGCGGACGGCGGAGCTGCAAGTACTGCAGGAGAAGAGCAAGCA
TCATCTCTCCCCATGGCGTCACCACATTCCTCCTCATCGGCAGACGACCC
CTCCACCGTTCGCCTCCTCACACGCCAGACCGGGAAACCCTTGAAACTCA
AGCGACTGCTCGCTGTGGACTTGCCCGTGCTATGCTCGAGTCCCATGACG
GCTGTCAGCATGCTAGGAGGCATGGACCGCTTGAGCGCGGCCTGCACTGG
CAACGCCCGCAAGCTCCACTTCTACTTCCGACCTGAGGACAAACTCAGCA
TCCCCGTACCCTCTCAAGGCAAGATTCCGTCCTCCCGTCTTCTGCTCCGT
GTCCGTCTCCGCAAGGACGGGACGACAGGGGATCGCACTGTGGTGGCCAA
GGAGGTGGTGGGTACGATTAGTACCACCTTTCAATTTACGGCCTTGGCTG
ATTTCCAATACCTGACTACGCAAGCTTTTCTTCCTGTGGGCACGGCGGAT
GTGGTCTCAAAGACACGTTTGGAGATCGTGCCATCTTCGTTTGTGCCAGT
GGCCCATGCGGGAAATTACGCGTATACTTCACTAAAGTCCTCGGCGTTGG
CAAATCAGGACACGGCGCGACGGCAGGGGGTTGTTATTAAGTTCGGGTGT
CCCATCCCTAAGGCTCCTCCGGCAATGTTGGTAAACCGACCGAGGAGGAG
GTTGGAGAAGTATGGGCAGGTGTTGGAGAAGCTGCAGGCGTTGTTTGATC
GGgtgagtttttgggagggagggagggagggagggagggaggaggaactg
agggcaagaaggaaggaaacgagttgcgaagtaggcttgcattttttgga
ttcattctttctgtgtagagtggcgatgggtgaagggtatatgcagtgaa
gggatcgtcacacacctagcctacagaaacgacgcctagccacgcttaaa
ttcatccctcccttccttcctccctccctccctccctccctccctccaaa
ttcaagcagACACGTGGCGGCCGTGAGATGTGGCAACGCAAGGCTCTCGA
GTCCAAATTCGAGGGGGACGACCTGCACGCTTTTTTGGAGCTGTTGCGCG
TGGTGGCGTACAACATGAGTAACGGGCCGTGGCGGGGGTTCTGGGTCAAG
TATGGCTATGATCCGAGTCAGGATTCAGTCGCGCGGCTGTACCAGGCACT
GGATGTCAGGTGGAAGGAGGCAGGGCTCGAGAAGCTGAAGACGAGCTACG
GGGAGGTCTGGAAGAAGGTGAGGGCGGAGGCGGGCAGGGAGGACGAGGAG
GAGGAGGGGGTGGAAGAGTTGAAGTTGTTTGGGTTGCCCGTACGGAGGCA
GATGGTGTTCCAGTTATGTGATTTGGGGAGTGCATCGTTGCAGCGGTTGG
TGCTGGCGGTGCCGAGAAAGGCGGAATGTACGGCGCAGGGGGGTTGGTTC
CGGCTGAGTGACTTGACGGTGTTACGTGGGAAAATTAAGAGATATTTGAG
TGGGAAGGTGGCCGAGTGCGTGAGGACGGGGAGTGTGGAGCCGGTGACGG
GCGGTAGGGGTGGGAAGGGAGGGAGGGAGGAAGGGGCGCTTTCGCCCGGA
GAAATGATTCTTGAGGCTGAGGCACGAAGGGGAGAGGAGGTTGTGCTGCC
GGAAAGAGGAAGTGGGGGAAGTAAGGGAGGAGGACGAGGGGAAGGAGAGG
GGGCGGGGATAAACGGTGCTGCTGGTGTTGATGGGGAAAGAGAGAGGGAA
GAATGCGATGGCGTAATGGCTGCTGCAACGAGGAAAAGCAAACGCAAGGC
AACGGGAGGAGGACGAGGGGGTGGGATAGGTGGGAGGGGTCGTGGCGGTC
GCAGCAAAAAGAAAGCACGGCGGGTGGGCGGTGAAGCGGAAGAGACGCAT
GAAAGTGAGAGCGACGAGGAGGAGGAGGAGAAGAAGGAAGGGAGGTATCA
AAATAGAGGAGAAAGGGACGAGGAGGAGTCTTACGGCCAGGGGCGTGGGG
ACGAGGAAGGGATGGAGGATGAGGAGGAAGCGGGAGCGCGTCAGTTGGAG
AGATTGTTTGGGCAGCCGGGCCGGCGTACCGTGGACAGGGCGAGGGCCAA
TACAGCGGCAGTGACGAGAGGGCGAACTCGCCATCAGGGGGGGGATGAGG
ACAAGGAGGACGATTTGGGCAGAACTTTTGTCATTCCCTTGACGGCAGGG
GATGTGCAGAACGCCAGCTCGATCCGGTTGTTGGGTGGGTATCAGGGAGC
GGATTACTCCTCCTCGTCGTCGGATGATGATGATGGGAGTGATTAAGAGG
TAAAAGATAAAAGGAAAAAGATATGCATGTTTAGACGCTCGAAACGAAAA
GAGATATTGTACGGCGACGAGGGGACGAAAGGCGAATATAGGACGTTGTA
CAGAACGCGATTGTAATGTTAGTAAACGTAAAGCAAATGCACCCAGAAAG
CATTAAGTTTTCATTTTCTCTGGTT
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protein sequence of NO09G02310.1

>NO09G02310.1-protein ID=NO09G02310.1-protein|Name=NO09G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=749bp
MCIIVSHSLCPIDFFATSNTQVTTTQEVKTYLPEEPSASASAAAMDIIAN
GEQKNGAPPASLSLPGCGAGAAADGGAASTAGEEQASSLPMASPHSSSSA
DDPSTVRLLTRQTGKPLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAA
CTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTGDRTV
VAKEVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLEIVPSSF
VPVAHAGNYAYTSLKSSALANQDTARRQGVVIKFGCPIPKAPPAMLVNRP
RRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLR
VVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLEKLKTSY
GEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRL
VLAVPRKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAECVRTGSVEPVT
GGRGGKGGREEGALSPGEMILEAEARRGEEVVLPERGSGGSKGGGRGEGE
GAGINGAAGVDGEREREECDGVMAAATRKSKRKATGGGRGGGIGGRGRGG
RSKKKARRVGGEAEETHESESDEEEEEKKEGRYQNRGERDEEESYGQGRG
DEEGMEDEEEAGARQLERLFGQPGRRTVDRARANTAAVTRGRTRHQGGDE
DKEDDLGRTFVIPLTAGDVQNASSIRLLGGYQGADYSSSSSDDDDGSD*
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Synonyms
Publications