NO09G01750, NO09G01750 (gene) Nannochloropsis oceanica

Overview
NameNO09G01750
Unique NameNO09G01750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2527
Alignment locationchr9:544576..547102 -

Link to JBrowse

Properties
Property NameValue
DescriptionInorganic phosphate transporter Pho88
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:544576..547102 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045047protein targeting to ER
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
GO:0005783endoplasmic reticulum
Vocabulary: INTERPRO
TermDefinition
IPR012098SND3_fun
Homology
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BLAST of NO09G01750 vs. NCBI_GenBank
Match: XP_005853612.1 (hypothetical protein NGA_0424800 [Nannochloropsis gaditana CCMP526] >EKU22751.1 hypothetical protein NGA_0424800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 297.4 bits (760), Expect = 7.300e-77
Identity = 155/197 (78.68%), Postives = 172/197 (87.31%), Query Frame = 0 
Query:   27 DVIPFLASTRVKRGSALTSSGAGGVLATLAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTALKKARLLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVAKKLKKGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFSMFLVGMTFLHFKMKNTYMIMYWG 224
            DVIPFLASTR KRG ALTS G GG+L TLA+RAGKALV SSAFRFVAEEK+FETV GMLAYR+AFQWSKD+TA +KARLLFTLY+CLYLGALLYSRQQAI  QD RTLKVAA+PA+LSS  D+AKK+KKGE  G       + GL GLA PQEKEMTF++YDLGQ+K+ALDRFS+FLVGMTFLHFKMKNTYMIMYWG
Sbjct:  125 DVIPFLASTRFKRGEALTSQGGGGLLFTLARRAGKALVGSSAFRFVAEEKIFETVAGMLAYRIAFQWSKDSTATRKARLLFTLYVCLYLGALLYSRQQAIAQQDARTLKVAAVPAVLSSLLDMAKKMKKGESPGG------LPGLAGLARPQEKEMTFRDYDLGQIKAALDRFSLFLVGMTFLHFKMKNTYMIMYWG 315
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BLAST of NO09G01750 vs. NCBI_GenBank
Match: EWM27606.1 (Inorganic phosphate transporter Pho88 [Nannochloropsis gaditana])

HSP 1 Score: 297.4 bits (760), Expect = 7.300e-77
Identity = 155/197 (78.68%), Postives = 172/197 (87.31%), Query Frame = 0 
Query:   27 DVIPFLASTRVKRGSALTSSGAGGVLATLAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTALKKARLLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVAKKLKKGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFSMFLVGMTFLHFKMKNTYMIMYWG 224
            DVIPFLASTR KRG ALTS G GG+L TLA+RAGKALV SSAFRFVAEEK+FETV GMLAYR+AFQWSKD+TA +KARLLFTLY+CLYLGALLYSRQQAI  QD RTLKVAA+PA+LSS  D+AKK+KKGE  G       + GL GLA PQEKEMTF++YDLGQ+K+ALDRFS+FLVGMTFLHFKMKNTYMIMYWG
Sbjct:  142 DVIPFLASTRFKRGEALTSQGGGGLLFTLARRAGKALVGSSAFRFVAEEKIFETVAGMLAYRIAFQWSKDSTATRKARLLFTLYVCLYLGALLYSRQQAIAQQDARTLKVAAVPAVLSSLLDMAKKMKKGESPGG------LPGLAGLARPQEKEMTFRDYDLGQIKAALDRFSLFLVGMTFLHFKMKNTYMIMYWG 332
The following BLAST results are available for this feature:
BLAST of NO09G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
XP_005853612.17.300e-7778.68hypothetical protein NGA_0424800 [Nannochloropsis ... [more]
EWM27606.17.300e-7778.68Inorganic phosphate transporter Pho88 [Nannochloro... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL121nonsL121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR128ngnoR128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010701NSK010701Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01750.2NO09G01750.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G01750.1NO09G01750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630249gene_4376Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100069g18gene2956Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01750.2NO09G01750.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G01750.1NO09G01750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01750 ID=NO09G01750|Name=NO09G01750|organism=Nannochloropsis oceanica|type=gene|length=2527bp
CCACATTTTCTGACAGGCACTGAAGGCTTGTGGTTTTGCCAAAATATGGG
CTCCCCAAGAGGAGGAATCGTCTCCACCGCAGGTTGCAGCACGAAGACGA
ACAACAGCAGTCGACGACGGACCAGCTTCATGGTGCTGCTCCTGGTGATC
GTGGGGGCCGTGCTGACAACAACACAAGCAAGACCAGCTGCAGATGTGGG
GAGCAGCAGGCCACCATCTTCTACAGCGGCCAGGAAACGCGCAGCATTGC
TCAAGGCCACCTCAAGTAGCAAGGTGAGTATGGGGAGATATGACGCACAT
TTTTGGGTGAAAAGGATGCCAACCTGATGAGACAGGAATGCTCGAGATGA
TAGAGATGAGCGCGAGCAAGCTTTCTGCCTCGGATGATTGGGTCGTCCAG
CAGTTGCGTCACGAGCCTCGAATGCCTGGTGCAGGCATGAATGTTCGTTC
TCACGCTATGGCTCACTTCTCTTTCCACCGCTACTTGTTTCTATACTTTG
TTATCCCATCTATGATGCCTTCAATTGCTTGTACATGTTGATAACTACTT
GCTTTGGCGGGATCGGTGTTTCTCAGCGCTCCAGGAGGCGCGCCACACTT
GCGCTTCTGACTTCCCACCACCATCCCATTGCCTAGCTAACTCCTTTTCC
CTCTCCCCCCGTCGTATTCGCAGAAGAAGCAGCCCAAACGCGACGACGAA
GATGAATCAACAGGCTCTTCCAAGCTCGACCGCATGCCAATAGTCGCCGC
TGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTCCTCCGCCTCCCTAGAAG
AGGACGACCCGGATGTCATCCCTTTCTTGGCCAGCACTCGCGTTAAACGT
GGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGAGTATTGGCCACCCTCGC
TAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTCTGCCTTTCGCTTCGTTG
CAGAAGAGAAGCTGTTTGAGACGGTCATCGGTATGCTCGCCTACCGGGTC
GCATTCCAATGGAGCAAAGACACCACGGCCTTGAAGAAGGCTCGGTTGTT
ATTCACGTTGTACATATGCTTGTATTTGGGTGCCCTGCTATATTCTAGAC
AGCAGGCTATCGAGCTGCAGGACACACGAACATTGAAGGTAGCGGCCATG
CCAGCCATGCTTTCTTCCTTCTTCGACGTGGCAAAGAAGCTGAAAAAGGG
CGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCTTATGGGAGGCCTGCAGG
GACTGGCTTCCCCACAAGAGAAGGAGATGACGTTTAAGGAGTATGATTTG
GGACAGGTCAAGAGCGCCCTGGACCGTTTTTCCATGTTCTTGGTGGGGAT
GACGTTTTTGCATTTCAAGATGAAGAACACGTACATGATTATGTACTGGG
Ggtgcgtctgtttgtgtttgtccctcccttcaccctccctccctccctcc
ctccctctctctcccttccttcccccatgctctccttcatccatccctct
ccctccatcctcccctcttgccttccatgtgagatcggtccgtcctctca
cacctcatcctattttccttccttactccccccttcatcttagAATCCTC
GGGCCTATCATGATGCTGCGCGAGCCATTGTTTCAAGTACATATTTTTGG
GATGGAGGAAACGGGAATAAGGCTGAGGCCATTTGGGCCGAAGGACGAGC
CTGAGGAAGTGGAGGATGGGGAGGGGGAGGAAGGTGGGGAGGAGGGGGCA
GAGACGGTCAAGGGGGAAGGAGGAGATGAGGAGGGGAGGGGGGACGAAGA
GGCAGGGGAGGAAGCGGAGCCCGGGGCAACGGAGGAGGAAGAGGAGGAGG
AGGAGGAGGAGGAAGTTGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAG
GAAGAGGAGGGAGAAGAAATAGAAGAGGAAGACATAGGAGAAGAGCTAGA
GGAGGAGGTGGTTGAAGTGGAGGAGGAGGACGAGGGGGAAGAGGAGGAGA
AAGAAGAAGAAGAAGAAGAGGAAGTCCCCGTTCGAAATAAGGCGGAGGGG
GGCGAAGGGAAGGAGGGTGACATTGCGAGTGATCATGCCCTGAAGGAGCA
CCCGGGGCAATTCCGGGTGAAGAAATTGGAGGAAGACGTGCATCCCCATG
CGGGGGACAAGAAGAGTGATATGACCCCGTCGGAGTTTTGTGTGGAGAAG
GAGGAGTAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGCACAGGACGGT
CTGTTTTTGTTTTTTTAAGAAGGACAAGGAATGGGGGCCTGTGCATAACA
ATGGTAAGAAGAACAAGGCGAAGGAGGCGAAGGAGGAGAGAATGAATAGG
GATAAGAACAAGCTTGCTTCATCGATAAATTGGAGAATTTTAAAAACGTG
AGGACGTGAGGGATGGCGAGGGAAAAATAAGAAATAACGTCTCAGCTTTG
ATTGCCCCACGCAGATTAGGATCCTTCCCGCCAAAAGAAACAACGACTCG
AAGAAAAGGAAAAATATCTGACGGAAG
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protein sequence of NO09G01750.2

>NO09G01750.2-protein ID=NO09G01750.2-protein|Name=NO09G01750.2|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MPIVAAAAKRSKKRRSSSASLEEDDPDVIPFLASTRVKRGSALTSSGAGG
VLATLAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTAL
KKARLLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVA
KKLKKGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFS
MFLVGMTFLHFKMKNTYMIMYWGILGPIMMLREPLFQVHIFGMEETGIRL
RPFGPKDEPEEVEDGEGEEGGEEGAETVKGEGGDEEGRGDEEAGEEAEPG
ATEEEEEEEEEEEVEKEEEEEEEEEEEEGEEIEEEDIGEELEEEVVEVEE
EDEGEEEEKEEEEEEEVPVRNKAEGGEGKEGDIASDHALKEHPGQFRVKK
LEEDVHPHAGDKKSDMTPSEFCVEKEE*
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protein sequence of NO09G01750.1

>NO09G01750.1-protein ID=NO09G01750.1-protein|Name=NO09G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MGSPRGGIVSTAGCSTKTNNSSRRRTSFMVLLLVIVGAVLTTTQARPAAD
VGSSRPPSSTAARKRAALLKATSSSKKKQPKRDDEDESTGSSKLDRMPIV
AAAAKRSKKRRSSSASLEEDDPDVIPFLASTRVKRGSALTSSGAGGVLAT
LAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTALKKAR
LLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVAKKLK
KGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFSMFLV
GMTFLHFKMKNTYMIMYWGILGPIMMLREPLFQVHIFGMEETGIRLRPFG
PKDEPEEVEDGEGEEGGEEGAETVKGEGGDEEGRGDEEAGEEAEPGATEE
EEEEEEEEEVEKEEEEEEEEEEEEGEEIEEEDIGEELEEEVVEVEEEDEG
EEEEKEEEEEEEVPVRNKAEGGEGKEGDIASDHALKEHPGQFRVKKLEED
VHPHAGDKKSDMTPSEFCVEKEE*
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Synonyms
Publications